| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674949
Identifier: 21674949
GI number: 21674949
Start: 2023940
End: 2024353
Strand: Reverse
Name: 21674949
Synonym: CT2140
Alternate gene names: NA
Gene position: 2024353-2023940 (Counterclockwise)
Preceding gene: 21674950
Following gene: 21674947
Centisome position: 93.94
GC content: 57.97
Gene sequence:
>414_bases ATGAATCAGCAAACCTACGCCTTCACGCTTGAAATGGAGGTGCGCGACTACGAGTGCGACATGCAGGGCATCGTTAACAA CAGTGTCTATCAGAACTATCTCGAACACGCGCGGCACGTTTATCTCAAAACGGTTGGCATCGATTTCAAGGAGTTCACCG AGCGGGGCATCAACCTCGTGGTTGTCCGCGCCGAGTTGGACTACAAGTTGCCCCTGCAAAGCGGCGACCGCTTCAGGGTC GGCCTGAACATGGTGCGCCAGTCACCGCTGCGATTCGCTTTTTACCAGGACATCCTGCGCCTGCCGGACATGAAGCCCGC AGTCAAAGCCAGAATCATCGGCACCGCCCTCAACGGCCGAGGCCGCCCGGAAATTCCGGCAGAACTCGAAGCGCTAATGC AGCCGGGCGAGTGA
Upstream 100 bases:
>100_bases CTCGCCGTCGCCGACGTGGCCGAGTTCCTGTCCGCCCTGACGGCGGCGATTCGGGCGAGGCGGTGAGCGGGCAGTTTTTT CAACGACAATCAAAACGCGG
Downstream 100 bases:
>100_bases GCGTCGCATTTACGAATCGAAACCGCGCAGGTTCAGCGAGTAACGATTGTCGGCATCGACGACGAGAAGCTTCCGTTCGA GCAGATTTTTCAGGTCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Thioesterase; Thioesterase Family Protein Domain Protein; Thioesterase Protein; 4-Hydroxybenzoyl-CoA Thioesterase
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MNQQTYAFTLEMEVRDYECDMQGIVNNSVYQNYLEHARHVYLKTVGIDFKEFTERGINLVVVRAELDYKLPLQSGDRFRV GLNMVRQSPLRFAFYQDILRLPDMKPAVKARIIGTALNGRGRPEIPAELEALMQPGE
Sequences:
>Translated_137_residues MNQQTYAFTLEMEVRDYECDMQGIVNNSVYQNYLEHARHVYLKTVGIDFKEFTERGINLVVVRAELDYKLPLQSGDRFRV GLNMVRQSPLRFAFYQDILRLPDMKPAVKARIIGTALNGRGRPEIPAELEALMQPGE >Mature_137_residues MNQQTYAFTLEMEVRDYECDMQGIVNNSVYQNYLEHARHVYLKTVGIDFKEFTERGINLVVVRAELDYKLPLQSGDRFRV GLNMVRQSPLRFAFYQDILRLPDMKPAVKARIIGTALNGRGRPEIPAELEALMQPGE
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15840; Mature: 15840
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQTYAFTLEMEVRDYECDMQGIVNNSVYQNYLEHARHVYLKTVGIDFKEFTERGINLV CCCCEEEEEEEEEECCCCCCHHHHHCHHHHHHHHHHHHHEEHHEECCCHHHHHHCCCEEE VVRAELDYKLPLQSGDRFRVGLNMVRQSPLRFAFYQDILRLPDMKPAVKARIIGTALNGR EEEEECCEECCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHCCCCCCHHHHEEEEEEECCC GRPEIPAELEALMQPGE CCCCCCHHHHHHCCCCC >Mature Secondary Structure MNQQTYAFTLEMEVRDYECDMQGIVNNSVYQNYLEHARHVYLKTVGIDFKEFTERGINLV CCCCEEEEEEEEEECCCCCCHHHHHCHHHHHHHHHHHHHEEHHEECCCHHHHHHCCCEEE VVRAELDYKLPLQSGDRFRVGLNMVRQSPLRFAFYQDILRLPDMKPAVKARIIGTALNGR EEEEECCEECCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHCCCCCCHHHHEEEEEEECCC GRPEIPAELEALMQPGE CCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA