| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is bchZ [H]
Identifier: 21674934
GI number: 21674934
Start: 2011633
End: 2013039
Strand: Direct
Name: bchZ [H]
Synonym: CT2125
Alternate gene names: 21674934
Gene position: 2011633-2013039 (Clockwise)
Preceding gene: 21674933
Following gene: 21674935
Centisome position: 93.35
GC content: 61.12
Gene sequence:
>1407_bases ATGGCAAAAACCATCCGGGACGAATCCACCGCAAGCGCCTACTGGGCGGCGGTCAATACCTTCTGCGCACTCAAAGACGT GCACGTCATCGCCGATGCCCCCGTGGGCTGCTACAACCTGGCTGGCGTGGCCGTCATGGACTACACCGACGCCATTCCCT ACCTCGAAAACCTCACGCCCACAAGCCTTACCGAGCGGGAGATATCCTCGTCGGGCAGCTCCCAAATCGTGCAGGAGACC ATCGAAAAGCTGATGGGTTCCGGCAAGCAGCTCATCCTCGTTTCGAGCGCAGAGAGCGAAATGATCGGCAGTGATCACCA GCACATGCTCGCCATGAAGTACCCGTCGGTGCGCTTTTTCGCCTCCGACTCGCTCGGCGAGAACGAATGGCAAGGGCGCG ACCGGGCGCTTGCGTGGCTCTTCGACCAGTTCGACGACGGCCAACCGTCACAGATCGAGCCCGGCACGGTGAGCATCATC GGCCCGACCTACGGCTGCTTCAACAGCCCTGCCGATCTGGCGGAAGTAAAACGCCTCGTCACCGGCGCGGGCGGTAGAGT CGCCCATGTCTATCCCTTCGAGTCGAAGGCGGCAGAGATCACAAAGCTGAAAAACTCGGCGGCAATTGTGGTGATGTACC GCGAATTCGGCGCGGCGCTCGCCGAAAAGCTCGGGCGTCCGGTACTCTATGCGCCATTCGGCATCGAGGAAACCGACCGT TTCATCGGGAAGATTGGACGCCTTTGCGGAACGCCGGAGCAGGCGACACGCTTCATTGCGGAGGAAAAGCGCACGACGCT CAGCCCGGTGTGGGACTTGTGGCGCGGGCCGCAGTCGGAGTGGTTCCCGACCATCCGCTTCGGGGTGGTCGCGAGCAAAA GCTACGCCGACGGTATCAAGCACGTGCTGGGGGACGAGCTTGGGATGCAGTGCCTCTTCAGCCTCGATTCAGCAGAAGTG GACAACAACGCCGTTCGCAAGGAGATCGTGCAGAAGCAGCCACAATTTCTCTACGGCCGGATGCCCGACAAGATTTACCT CGCCGAAGCCGACGCCAAAAGCCGCTTCATCCCGGCAGGCTTCCCAGGCCCCATCGTGCGCCGCGCGCTCGGCACGCCAT TCATGGGCCACAGCGGCGTGGTCTGGCTGGTGCAGGAGATCGTCAACGCGCTCTATGACACGCTCTTCAACTTCCTGCCT ATCACCCGGCGGCAGCAGGCAGCGGCCCCGACCAAGCCGCTCAAATGGACACCCGAAGCCAATGCGATTCTGGACGGTAT CGTCAGAAAAGCCCCCTTCATCAGCCAGATATCCTTTGGTCGAGAGCTGAAACGCAAAGCTGAAAATCTAGCCGCCTCAC GCGGAGCTGACACCGTAACGCCGGATATTCTGCAACAGTTGGGCTGA
Upstream 100 bases:
>100_bases GCGTTAAACCTTGATCCGTAGGCACATATTATTGTAAATTAGGCGCTTCATCCGTGCTTTCCGGATGAGCTTCGATCAAC CCAGCTTACGCCCACCGATC
Downstream 100 bases:
>100_bases AACCCAGCTCCTTGTCCGGGGCAGGCCTCGCGCCTGCCCTTTCCTTTCCTTCCACATCATCCATCGCATTACCACCAGCT CAAGCACCAGCCTTACAAAT
Product: chlorophyllide reductase, BchZ subunit
Products: NA
Alternate protein names: Chlorin reductase subunit Z [H]
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MAKTIRDESTASAYWAAVNTFCALKDVHVIADAPVGCYNLAGVAVMDYTDAIPYLENLTPTSLTEREISSSGSSQIVQET IEKLMGSGKQLILVSSAESEMIGSDHQHMLAMKYPSVRFFASDSLGENEWQGRDRALAWLFDQFDDGQPSQIEPGTVSII GPTYGCFNSPADLAEVKRLVTGAGGRVAHVYPFESKAAEITKLKNSAAIVVMYREFGAALAEKLGRPVLYAPFGIEETDR FIGKIGRLCGTPEQATRFIAEEKRTTLSPVWDLWRGPQSEWFPTIRFGVVASKSYADGIKHVLGDELGMQCLFSLDSAEV DNNAVRKEIVQKQPQFLYGRMPDKIYLAEADAKSRFIPAGFPGPIVRRALGTPFMGHSGVVWLVQEIVNALYDTLFNFLP ITRRQQAAAPTKPLKWTPEANAILDGIVRKAPFISQISFGRELKRKAENLAASRGADTVTPDILQQLG
Sequences:
>Translated_468_residues MAKTIRDESTASAYWAAVNTFCALKDVHVIADAPVGCYNLAGVAVMDYTDAIPYLENLTPTSLTEREISSSGSSQIVQET IEKLMGSGKQLILVSSAESEMIGSDHQHMLAMKYPSVRFFASDSLGENEWQGRDRALAWLFDQFDDGQPSQIEPGTVSII GPTYGCFNSPADLAEVKRLVTGAGGRVAHVYPFESKAAEITKLKNSAAIVVMYREFGAALAEKLGRPVLYAPFGIEETDR FIGKIGRLCGTPEQATRFIAEEKRTTLSPVWDLWRGPQSEWFPTIRFGVVASKSYADGIKHVLGDELGMQCLFSLDSAEV DNNAVRKEIVQKQPQFLYGRMPDKIYLAEADAKSRFIPAGFPGPIVRRALGTPFMGHSGVVWLVQEIVNALYDTLFNFLP ITRRQQAAAPTKPLKWTPEANAILDGIVRKAPFISQISFGRELKRKAENLAASRGADTVTPDILQQLG >Mature_467_residues AKTIRDESTASAYWAAVNTFCALKDVHVIADAPVGCYNLAGVAVMDYTDAIPYLENLTPTSLTEREISSSGSSQIVQETI EKLMGSGKQLILVSSAESEMIGSDHQHMLAMKYPSVRFFASDSLGENEWQGRDRALAWLFDQFDDGQPSQIEPGTVSIIG PTYGCFNSPADLAEVKRLVTGAGGRVAHVYPFESKAAEITKLKNSAAIVVMYREFGAALAEKLGRPVLYAPFGIEETDRF IGKIGRLCGTPEQATRFIAEEKRTTLSPVWDLWRGPQSEWFPTIRFGVVASKSYADGIKHVLGDELGMQCLFSLDSAEVD NNAVRKEIVQKQPQFLYGRMPDKIYLAEADAKSRFIPAGFPGPIVRRALGTPFMGHSGVVWLVQEIVNALYDTLFNFLPI TRRQQAAAPTKPLKWTPEANAILDGIVRKAPFISQISFGRELKRKAENLAASRGADTVTPDILQQLG
Specific function: Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole [H]
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ChlB/BchB/BchZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010244 - InterPro: IPR000510 - InterPro: IPR013580 - InterPro: IPR016209 [H]
Pfam domain/function: PF00148 Oxidored_nitro; PF08369 PCP_red [H]
EC number: NA
Molecular weight: Translated: 51406; Mature: 51275
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTIRDESTASAYWAAVNTFCALKDVHVIADAPVGCYNLAGVAVMDYTDAIPYLENLTP CCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHCCEEEEHHHHHHHHHHCCCC TSLTEREISSSGSSQIVQETIEKLMGSGKQLILVSSAESEMIGSDHQHMLAMKYPSVRFF CCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCEEEEEECCCEEEE ASDSLGENEWQGRDRALAWLFDQFDDGQPSQIEPGTVSIIGPTYGCFNSPADLAEVKRLV ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH TGAGGRVAHVYPFESKAAEITKLKNSAAIVVMYREFGAALAEKLGRPVLYAPFGIEETDR HCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCEEEECCCCCHHHH FIGKIGRLCGTPEQATRFIAEEKRTTLSPVWDLWRGPQSEWFPTIRFGVVASKSYADGIK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHEEECCHHHHHHH HVLGDELGMQCLFSLDSAEVDNNAVRKEIVQKQPQFLYGRMPDKIYLAEADAKSRFIPAG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCCCCC FPGPIVRRALGTPFMGHSGVVWLVQEIVNALYDTLFNFLPITRRQQAAAPTKPLKWTPEA CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEECCCH NAILDGIVRKAPFISQISFGRELKRKAENLAASRGADTVTPDILQQLG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC >Mature Secondary Structure AKTIRDESTASAYWAAVNTFCALKDVHVIADAPVGCYNLAGVAVMDYTDAIPYLENLTP CCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHCCEEEEHHHHHHHHHHCCCC TSLTEREISSSGSSQIVQETIEKLMGSGKQLILVSSAESEMIGSDHQHMLAMKYPSVRFF CCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCEEEEEECCCEEEE ASDSLGENEWQGRDRALAWLFDQFDDGQPSQIEPGTVSIIGPTYGCFNSPADLAEVKRLV ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH TGAGGRVAHVYPFESKAAEITKLKNSAAIVVMYREFGAALAEKLGRPVLYAPFGIEETDR HCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCEEEECCCCCHHHH FIGKIGRLCGTPEQATRFIAEEKRTTLSPVWDLWRGPQSEWFPTIRFGVVASKSYADGIK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHEEECCHHHHHHH HVLGDELGMQCLFSLDSAEVDNNAVRKEIVQKQPQFLYGRMPDKIYLAEADAKSRFIPAG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCCCCC FPGPIVRRALGTPFMGHSGVVWLVQEIVNALYDTLFNFLPITRRQQAAAPTKPLKWTPEA CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEECCCH NAILDGIVRKAPFISQISFGRELKRKAENLAASRGADTVTPDILQQLG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8437569; 10648776 [H]