Click here to switch to the map view.

The map label for this gene is fccB-2 [H]

Identifier: 21674891

GI number: 21674891

Start: 1971869

End: 1973245

Strand: Direct

Name: fccB-2 [H]

Synonym: CT2081

Alternate gene names: 21674891

Gene position: 1971869-1973245 (Clockwise)

Preceding gene: 21674890

Following gene: 21674892

Centisome position: 91.5

GC content: 57.73

Gene sequence:

>1377_bases
ATGAGCATTTCAAGACGTGATTTCAACAAGCTGCTCCTGGCCGGCGCGGCAGGCTCGGCGTTCGGGTTATTCGGCAGCGG
CAACACGGCGTTCGCGGCCAGAAAACGGGTGGTGGTTATCGGCGGCGGATTTGGCGGCGCAGCTACGGCCAAGTATCTCA
AAAAGCTCGACCCGACGCTCGCGGTCACGCTCATCGAACCGAAACCGGCTTTCGTGACCTGCCCCTTCAGCAACTGGGTG
CTTGGCGGGTTGAGAACCATGAAGGATATCACTCACACCTACACGGCTCTCCGTACCAGACATGGAGTGAATGTCATTGC
CGACAGGGTCGTTTCTGTCGATGCCGCAAAAGGCACGCTCAGGCTTGCGGGTGGCCGGGTTATCGGATATGATCGTCTCG
TCGTCTCTCCCGGTATCGATTTCAAGTATGACACAATTCCGGGATACAGCCAGAAAATCGCCAAGTCAAAAATGCCTCAT
GCCTGGCAGGCTGGCCCGCAGACGATTCTCCTGCATCGCCAGCTTCAGGCGATGAAAAATGGCGGCACCGTCGTCATCTG
CCCGCCTGACAATCCGTTCCGTTGCCCTCCCGGCCCGTACGAGCGCGCAAGCCTGATCGCTTACTACCTGAAACAGCACA
AACCGAAATCGAAGATCGTCATCCTCGACGCCAAGGAGAAGTTCTCCAAGCAGGGACTCTTCACCAAAGGGTGGGAGAGC
CGCTATCCCGGCATGATCGAGTTGCGCGGCTCAACCGGAGGCGGAAAAGTTCTTGGCGTTGACGCCAAAGCCATGACGGT
CGAAACTGATCTCGGCGCGGTGAAGGGTGACGTCATCAACGTCATCCCGGCGCAGAAAGCAGGCAAAATCGCTTTCGAGG
CAGGACTTACCAATGAAAAAGGGTGGTGCCCGGTCAATCCTTCATCCTTCGAATCGACGATTCACCAAGGAATTCACGTC
ATCGGAGACGCTTGCATCGCCGGCGCGATGCCGAAATCCGGCTTCGCGGCCAGCAGCCAGGGTAAGGTTGCCGCAGTGGC
GATCATCAACCTGCTTCGCGGACAGGAACCAGCTCCGCCGTCTCTGGTCAATACCTGCTACAGCCTGATCGGGCCGAAAT
ACGGCGTTTCCGTTGCGGGCGTTTATCAGCTGTCTCCCACCGGAATCGTTGAAATACCGGGATCGGGCGGCCGACTCCGG
CCGATGCCAGCGACGAACAGCTGGAACAGGAGGCGATTTTCGCCGAAGGCTGGTACACCAATATCAGCAAGGATATCTGG
GGATAAACCATTGGACAGCTGCGGAGTACCGGCTGTCAACCATCAAGCGCCATTACCCCTCACGCACAAGGCAACTCCTG
ATTGCCGTAAGCGCTAA

Upstream 100 bases:

>100_bases
GGCCGTCACGCCAAAGGATATACCGGCGAGGAGATTCACCTCATCGCCGAATATTTCGGAAATCTTTCCAAAAAGAACCA
CTAACCCGAAGGAGGCGGAT

Downstream 100 bases:

>100_bases
TAGATTACAAACTCTGGCGCTACGGCAATCGGTGAGATGTTTTTTTTGATGAAAACCCGCAAGAATAATTCTGACCGCAC
CAAGTATCCCCCCTTTGATG

Product: sulfide dehydrogenase, flavoprotein subunit

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSISRRDFNKLLLAGAAGSAFGLFGSGNTAFAARKRVVVIGGGFGGAATAKYLKKLDPTLAVTLIEPKPAFVTCPFSNWV
LGGLRTMKDITHTYTALRTRHGVNVIADRVVSVDAAKGTLRLAGGRVIGYDRLVVSPGIDFKYDTIPGYSQKIAKSKMPH
AWQAGPQTILLHRQLQAMKNGGTVVICPPDNPFRCPPGPYERASLIAYYLKQHKPKSKIVILDAKEKFSKQGLFTKGWES
RYPGMIELRGSTGGGKVLGVDAKAMTVETDLGAVKGDVINVIPAQKAGKIAFEAGLTNEKGWCPVNPSSFESTIHQGIHV
IGDACIAGAMPKSGFAASSQGKVAAVAIINLLRGQEPAPPSLVNTCYSLIGPKYGVSVAGVYQLSPTGIVEIPGSGGRLR
PMPATNSWNRRRFSPKAGTPISARISGDKPLDSCGVPAVNHQAPLPLTHKATPDCRKR

Sequences:

>Translated_458_residues
MSISRRDFNKLLLAGAAGSAFGLFGSGNTAFAARKRVVVIGGGFGGAATAKYLKKLDPTLAVTLIEPKPAFVTCPFSNWV
LGGLRTMKDITHTYTALRTRHGVNVIADRVVSVDAAKGTLRLAGGRVIGYDRLVVSPGIDFKYDTIPGYSQKIAKSKMPH
AWQAGPQTILLHRQLQAMKNGGTVVICPPDNPFRCPPGPYERASLIAYYLKQHKPKSKIVILDAKEKFSKQGLFTKGWES
RYPGMIELRGSTGGGKVLGVDAKAMTVETDLGAVKGDVINVIPAQKAGKIAFEAGLTNEKGWCPVNPSSFESTIHQGIHV
IGDACIAGAMPKSGFAASSQGKVAAVAIINLLRGQEPAPPSLVNTCYSLIGPKYGVSVAGVYQLSPTGIVEIPGSGGRLR
PMPATNSWNRRRFSPKAGTPISARISGDKPLDSCGVPAVNHQAPLPLTHKATPDCRKR
>Mature_457_residues
SISRRDFNKLLLAGAAGSAFGLFGSGNTAFAARKRVVVIGGGFGGAATAKYLKKLDPTLAVTLIEPKPAFVTCPFSNWVL
GGLRTMKDITHTYTALRTRHGVNVIADRVVSVDAAKGTLRLAGGRVIGYDRLVVSPGIDFKYDTIPGYSQKIAKSKMPHA
WQAGPQTILLHRQLQAMKNGGTVVICPPDNPFRCPPGPYERASLIAYYLKQHKPKSKIVILDAKEKFSKQGLFTKGWESR
YPGMIELRGSTGGGKVLGVDAKAMTVETDLGAVKGDVINVIPAQKAGKIAFEAGLTNEKGWCPVNPSSFESTIHQGIHVI
GDACIAGAMPKSGFAASSQGKVAAVAIINLLRGQEPAPPSLVNTCYSLIGPKYGVSVAGVYQLSPTGIVEIPGSGGRLRP
MPATNSWNRRRFSPKAGTPISARISGDKPLDSCGVPAVNHQAPLPLTHKATPDCRKR

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 48574; Mature: 48443

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISRRDFNKLLLAGAAGSAFGLFGSGNTAFAARKRVVVIGGGFGGAATAKYLKKLDPTL
CCCCHHCCCEEEEECCCCCEEEEECCCCEEEEECCEEEEEECCCCHHHHHHHHHHCCCEE
AVTLIEPKPAFVTCPFSNWVLGGLRTMKDITHTYTALRTRHGVNVIADRVVSVDAAKGTL
EEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCEE
RLAGGRVIGYDRLVVSPGIDFKYDTIPGYSQKIAKSKMPHAWQAGPQTILLHRQLQAMKN
EEECCEEEEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHC
GGTVVICPPDNPFRCPPGPYERASLIAYYLKQHKPKSKIVILDAKEKFSKQGLFTKGWES
CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCCCCCC
RYPGMIELRGSTGGGKVLGVDAKAMTVETDLGAVKGDVINVIPAQKAGKIAFEAGLTNEK
CCCCEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEECCCCCC
GWCPVNPSSFESTIHQGIHVIGDACIAGAMPKSGFAASSQGKVAAVAIINLLRGQEPAPP
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
SLVNTCYSLIGPKYGVSVAGVYQLSPTGIVEIPGSGGRLRPMPATNSWNRRRFSPKAGTP
HHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCCCCEECCCCCCCCCCCEECCCCCCCC
ISARISGDKPLDSCGVPAVNHQAPLPLTHKATPDCRKR
EEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure 
SISRRDFNKLLLAGAAGSAFGLFGSGNTAFAARKRVVVIGGGFGGAATAKYLKKLDPTL
CCCHHCCCEEEEECCCCCEEEEECCCCEEEEECCEEEEEECCCCHHHHHHHHHHCCCEE
AVTLIEPKPAFVTCPFSNWVLGGLRTMKDITHTYTALRTRHGVNVIADRVVSVDAAKGTL
EEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCEE
RLAGGRVIGYDRLVVSPGIDFKYDTIPGYSQKIAKSKMPHAWQAGPQTILLHRQLQAMKN
EEECCEEEEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHC
GGTVVICPPDNPFRCPPGPYERASLIAYYLKQHKPKSKIVILDAKEKFSKQGLFTKGWES
CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCCCCCC
RYPGMIELRGSTGGGKVLGVDAKAMTVETDLGAVKGDVINVIPAQKAGKIAFEAGLTNEK
CCCCEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEECCCCCC
GWCPVNPSSFESTIHQGIHVIGDACIAGAMPKSGFAASSQGKVAAVAIINLLRGQEPAPP
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
SLVNTCYSLIGPKYGVSVAGVYQLSPTGIVEIPGSGGRLRPMPATNSWNRRRFSPKAGTP
HHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCCCCEECCCCCCCCCCCEECCCCCCCC
ISARISGDKPLDSCGVPAVNHQAPLPLTHKATPDCRKR
EEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]