| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is mutL
Identifier: 21674838
GI number: 21674838
Start: 1923782
End: 1925656
Strand: Reverse
Name: mutL
Synonym: CT2028
Alternate gene names: 21674838
Gene position: 1925656-1923782 (Counterclockwise)
Preceding gene: 21674839
Following gene: 21674837
Centisome position: 89.36
GC content: 58.03
Gene sequence:
>1875_bases ATGGCTTCCATTGCAAGACTTCCTGATATTGTCGCTAACAAAATTTCAGCTGGCGAGGTGGTGCAGCGCCCTGCCTCGGT GGTCAAGGAGCTGATCGAAAACTCCATTGACGCCGGCGCGAGCCGCATCACCGTCATCATAAAAGATGCCGGGCGGCAGC TCGTGCAGATCATCGATAATGGCTGCGGCATGGAGAGCGACGATGTGCTGCTCAGCGTTGAGCGCTTTGCCACCAGCAAG ATTTCTGAGGTTGACGACCTTGACGCGCTCCGTACGCTCGGCTTCCGTGGCGAGGCGCTGGCGAGCATCTCCTCGGTCTC ACATTTCGAGTTGAAGACTCGCAAGGCAGGCAATTCGCTCGGTACGCTGCTCAGGAGCGACGGCGGCGTCATCGAAACAC CGCAACCCGCGCAGTGCGAACCCGGCACCTCCATCGCTGTCCGGAACCTCTTTTTTAACGTGCCCGCCCGGCGCAAGTTC CTCAAATCCAACGCTACCGAGTTCAAGCACATCCATGAGACGGTCAAGGCGTTCGTGCTCTCCTATCCCGAGATCGAGTG GCGGATGATGAACGATGACGAGGAGCTGTTCCACTTCCGCACCTCCGACGTGCGCGAGCGGCTGAGCCACTTTTATGGGG AGGGATTCGGCGAGAGCCTCATCGAGGTGACCGAGGAGAATGACTACATGACTATCGGCGGCTACCTCGGCAAGCCAGGC ATGATGGTGCGGCAGAAGTACGATCAGTACTTTTTTATCAACCGGCGCCTCATCCAGAACCGGATGCTCGTGCAGGCGGT GCAGCAGGCTTATGGCGAGCTGCTCGAAGAGCGGCAGTCGCCATTCGCATTGCTCTTTCTCGGTCTCGACCCGTCGCTGG TGGATGTGAATGTCCATCCGGCCAAGCTCGAAGTGCGTTTCGAGGATGAAAAAAGCATCCGGAGCATGGTTTATCCGGTG GTCAAGCGAGCCGTCCGAACGGCTGATTTTTCATCCGAGGCGTCGTTTGCGGCTCCATCCGCACCCACAGTTTCCGGCGA GGTTGACTTGCCGGAAGTTTCGTCGCGGAAGCTTTCGTATTCCTCGTTTTCAGGCAAAGCGTCGACCACCGGCGATCTGT ACCGGAACTACCGGGCGGGAGCGTTCAGTGCTCCTTCATCCGTTTCTCCGATGCTTTTCGATTCTTCGCTGGAAACATCG CTGTCCGCCGGAAGTCGCCCCACTCCGATGGTTCAGGAGTCGCTGCTGACCCCGTCGGTGGACCAGCCCGATACCGGTGA CGGGGAGAATCCGGTTGCGCCGGAGAAGGAACCGAAAATCTGGCAGTTGCACAACAAGTACATCATCTGCCAGATCAAGA CCGGGCTGATGATTATCGACCAGCATGTGGCGCACGAGCGGGTGCTCTACGAACGCGCCATCGACATCATGAACGAGGCC GCGCCGAATTCGCAGCAGTTGCTTTTTCCGCAGAAGATCGACCTCAAACCGTGGCAGTACGAGGTTTTCGAGGAGATCAG CGACGAGTTGTACCGGCTCGGCTTTAACATTCGGCCGTTTGGCGGCATGAGCGTCATGATCGAGGGGGTGCCGCCCGACG TGCGAGACGGCGCGGAGGCAACGATTTTACAGGATATGATCGCCGAGTACCAGGAGAACGCCGCGAAGCTGAAGCTCGAA AAGCGCGACAACCTCGCCAAATCCTACTCTTGCCGCAATGCTATCATGACTGGCCAGAAGCTCAGTGTTGAAGAGATGCG AATGCTCATCGACCGCCTTTTCGCCACCCGGATGCCCTATGTCTGTCCGCACGGTCGTCCGGTGATCATAAGGCTTTCAC TCGGCGAACTCGACCGCATGTTCGGAAGAACATAG
Upstream 100 bases:
>100_bases TTCAAAAGCTTCCGGAATATGCCACATTTGTCGAATGATACTTATGACCTGGGAGTGCCCCGAACGAGACTGGATTCATT GAAAACCGTGTGTTCATTGT
Downstream 100 bases:
>100_bases GAGCGGTTAGCCGCGAATGTTGCGGACATCGTGGATCAAAAAAGATATGAAAAAAGCCGAGGGCCTCTTTTCAGAGGTTT GTTTCCTGAAAAATAAGTTC
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MASIARLPDIVANKISAGEVVQRPASVVKELIENSIDAGASRITVIIKDAGRQLVQIIDNGCGMESDDVLLSVERFATSK ISEVDDLDALRTLGFRGEALASISSVSHFELKTRKAGNSLGTLLRSDGGVIETPQPAQCEPGTSIAVRNLFFNVPARRKF LKSNATEFKHIHETVKAFVLSYPEIEWRMMNDDEELFHFRTSDVRERLSHFYGEGFGESLIEVTEENDYMTIGGYLGKPG MMVRQKYDQYFFINRRLIQNRMLVQAVQQAYGELLEERQSPFALLFLGLDPSLVDVNVHPAKLEVRFEDEKSIRSMVYPV VKRAVRTADFSSEASFAAPSAPTVSGEVDLPEVSSRKLSYSSFSGKASTTGDLYRNYRAGAFSAPSSVSPMLFDSSLETS LSAGSRPTPMVQESLLTPSVDQPDTGDGENPVAPEKEPKIWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAIDIMNEA APNSQQLLFPQKIDLKPWQYEVFEEISDELYRLGFNIRPFGGMSVMIEGVPPDVRDGAEATILQDMIAEYQENAAKLKLE KRDNLAKSYSCRNAIMTGQKLSVEEMRMLIDRLFATRMPYVCPHGRPVIIRLSLGELDRMFGRT
Sequences:
>Translated_624_residues MASIARLPDIVANKISAGEVVQRPASVVKELIENSIDAGASRITVIIKDAGRQLVQIIDNGCGMESDDVLLSVERFATSK ISEVDDLDALRTLGFRGEALASISSVSHFELKTRKAGNSLGTLLRSDGGVIETPQPAQCEPGTSIAVRNLFFNVPARRKF LKSNATEFKHIHETVKAFVLSYPEIEWRMMNDDEELFHFRTSDVRERLSHFYGEGFGESLIEVTEENDYMTIGGYLGKPG MMVRQKYDQYFFINRRLIQNRMLVQAVQQAYGELLEERQSPFALLFLGLDPSLVDVNVHPAKLEVRFEDEKSIRSMVYPV VKRAVRTADFSSEASFAAPSAPTVSGEVDLPEVSSRKLSYSSFSGKASTTGDLYRNYRAGAFSAPSSVSPMLFDSSLETS LSAGSRPTPMVQESLLTPSVDQPDTGDGENPVAPEKEPKIWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAIDIMNEA APNSQQLLFPQKIDLKPWQYEVFEEISDELYRLGFNIRPFGGMSVMIEGVPPDVRDGAEATILQDMIAEYQENAAKLKLE KRDNLAKSYSCRNAIMTGQKLSVEEMRMLIDRLFATRMPYVCPHGRPVIIRLSLGELDRMFGRT >Mature_623_residues ASIARLPDIVANKISAGEVVQRPASVVKELIENSIDAGASRITVIIKDAGRQLVQIIDNGCGMESDDVLLSVERFATSKI SEVDDLDALRTLGFRGEALASISSVSHFELKTRKAGNSLGTLLRSDGGVIETPQPAQCEPGTSIAVRNLFFNVPARRKFL KSNATEFKHIHETVKAFVLSYPEIEWRMMNDDEELFHFRTSDVRERLSHFYGEGFGESLIEVTEENDYMTIGGYLGKPGM MVRQKYDQYFFINRRLIQNRMLVQAVQQAYGELLEERQSPFALLFLGLDPSLVDVNVHPAKLEVRFEDEKSIRSMVYPVV KRAVRTADFSSEASFAAPSAPTVSGEVDLPEVSSRKLSYSSFSGKASTTGDLYRNYRAGAFSAPSSVSPMLFDSSLETSL SAGSRPTPMVQESLLTPSVDQPDTGDGENPVAPEKEPKIWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAIDIMNEAA PNSQQLLFPQKIDLKPWQYEVFEEISDELYRLGFNIRPFGGMSVMIEGVPPDVRDGAEATILQDMIAEYQENAAKLKLEK RDNLAKSYSCRNAIMTGQKLSVEEMRMLIDRLFATRMPYVCPHGRPVIIRLSLGELDRMFGRT
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=349, Percent_Identity=36.3896848137536, Blast_Score=213, Evalue=6e-55, Organism=Homo sapiens, GI4505913, Length=330, Percent_Identity=31.2121212121212, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI310128478, Length=330, Percent_Identity=31.2121212121212, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI4505911, Length=325, Percent_Identity=28.3076923076923, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI189458898, Length=325, Percent_Identity=28.3076923076923, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI189458896, Length=317, Percent_Identity=28.0757097791798, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI91992162, Length=255, Percent_Identity=31.7647058823529, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI91992160, Length=255, Percent_Identity=31.7647058823529, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI263191589, Length=255, Percent_Identity=31.3725490196078, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI310128480, Length=296, Percent_Identity=29.3918918918919, Blast_Score=110, Evalue=4e-24, Organism=Escherichia coli, GI1790612, Length=321, Percent_Identity=40.4984423676012, Blast_Score=243, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71991825, Length=322, Percent_Identity=32.6086956521739, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17562796, Length=412, Percent_Identity=28.1553398058252, Blast_Score=139, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323819, Length=349, Percent_Identity=32.6647564469914, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6324247, Length=412, Percent_Identity=25, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6325093, Length=284, Percent_Identity=26.7605633802817, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323063, Length=153, Percent_Identity=30.718954248366, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI17136968, Length=316, Percent_Identity=35.7594936708861, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI17136970, Length=172, Percent_Identity=37.7906976744186, Blast_Score=113, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_CHLTE (Q8KAX3)
Other databases:
- EMBL: AE006470 - RefSeq: NP_662903.1 - ProteinModelPortal: Q8KAX3 - SMR: Q8KAX3 - GeneID: 1007532 - GenomeReviews: AE006470_GR - KEGG: cte:CT2028 - NMPDR: fig|194439.1.peg.1997 - TIGR: CT2028 - HOGENOM: HBG520262 - OMA: FLFINNR - ProtClustDB: CLSK638049 - BioCyc: CTEP194439:CT_2028-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 69838; Mature: 69706
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIARLPDIVANKISAGEVVQRPASVVKELIENSIDAGASRITVIIKDAGRQLVQIIDN CCCHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHC GCGMESDDVLLSVERFATSKISEVDDLDALRTLGFRGEALASISSVSHFELKTRKAGNSL CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHH GTLLRSDGGVIETPQPAQCEPGTSIAVRNLFFNVPARRKFLKSNATEFKHIHETVKAFVL HHHHHCCCCEECCCCCCCCCCCCHHEEHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH SYPEIEWRMMNDDEELFHFRTSDVRERLSHFYGEGFGESLIEVTEENDYMTIGGYLGKPG CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCCC MMVRQKYDQYFFINRRLIQNRMLVQAVQQAYGELLEERQSPFALLFLGLDPSLVDVNVHP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECC AKLEVRFEDEKSIRSMVYPVVKRAVRTADFSSEASFAAPSAPTVSGEVDLPEVSSRKLSY EEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSFSGKASTTGDLYRNYRAGAFSAPSSVSPMLFDSSLETSLSAGSRPTPMVQESLLTPSV CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHCCCCCCCHHHHHHHCCCCC DQPDTGDGENPVAPEKEPKIWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAIDIMNEA CCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHC APNSQQLLFPQKIDLKPWQYEVFEEISDELYRLGFNIRPFGGMSVMIEGVPPDVRDGAEA CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHH TILQDMIAEYQENAAKLKLEKRDNLAKSYSCRNAIMTGQKLSVEEMRMLIDRLFATRMPY HHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC VCPHGRPVIIRLSLGELDRMFGRT CCCCCCEEEEEECHHHHHHHHCCC >Mature Secondary Structure ASIARLPDIVANKISAGEVVQRPASVVKELIENSIDAGASRITVIIKDAGRQLVQIIDN CCHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHC GCGMESDDVLLSVERFATSKISEVDDLDALRTLGFRGEALASISSVSHFELKTRKAGNSL CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHH GTLLRSDGGVIETPQPAQCEPGTSIAVRNLFFNVPARRKFLKSNATEFKHIHETVKAFVL HHHHHCCCCEECCCCCCCCCCCCHHEEHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH SYPEIEWRMMNDDEELFHFRTSDVRERLSHFYGEGFGESLIEVTEENDYMTIGGYLGKPG CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCCC MMVRQKYDQYFFINRRLIQNRMLVQAVQQAYGELLEERQSPFALLFLGLDPSLVDVNVHP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECC AKLEVRFEDEKSIRSMVYPVVKRAVRTADFSSEASFAAPSAPTVSGEVDLPEVSSRKLSY EEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSFSGKASTTGDLYRNYRAGAFSAPSSVSPMLFDSSLETSLSAGSRPTPMVQESLLTPSV CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHCCCCCCCHHHHHHHCCCCC DQPDTGDGENPVAPEKEPKIWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAIDIMNEA CCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHC APNSQQLLFPQKIDLKPWQYEVFEEISDELYRLGFNIRPFGGMSVMIEGVPPDVRDGAEA CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHH TILQDMIAEYQENAAKLKLEKRDNLAKSYSCRNAIMTGQKLSVEEMRMLIDRLFATRMPY HHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC VCPHGRPVIIRLSLGELDRMFGRT CCCCCCEEEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12093901