| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is bchE [H]
Identifier: 21674771
GI number: 21674771
Start: 1855813
End: 1857453
Strand: Direct
Name: bchE [H]
Synonym: CT1959
Alternate gene names: 21674771
Gene position: 1855813-1857453 (Clockwise)
Preceding gene: 21674770
Following gene: 21674772
Centisome position: 86.12
GC content: 56.43
Gene sequence:
>1641_bases ATGAAAATTCTGATGATTCAGCCGAATTATCACTCAGGCGGCGCCGAAATTGCAGGCAACTGGACGCCAAGCTGGGTTGC CTACATCGGCGGTGCGTTGAAGCAGGCTGGCTTCAATCAGGTAAAGTTTGTGGATGCAATGGCTGACGACCTGCCGGACG AGACCATTGAAGAGATCATCCGCAAAAACCAGCCGGATGTGGTAATGACCACCAATATCACCCCGTCGATCTTCAAGGCG CAGGACATCATGAAGATCGCCAAGAAGGTCAACAAGAATATCCGCACCATCATGGGCGGCATTCACTCCACCTTCATGTA CCCGCAGGTGCTCACCGAAGCCCCGGAGACCGATTACGTCGTTCGCGGCGAAGGCGAAGAGGTGACCGTCAACCTCATGA AGGCGATCGCGGCAGGGAACGACAAAGAGACACGCTCCGAAATCACCGGCATCGCCTATATCGATGAGAACGGTAAAGTA TTCGCGACGGCGGCCCACCCGGTCATCGAAGACCTCGACACCCTGTCACCGGACTGGAGCCTCTACGACTGGGACAAGTA CATCTACACCCCTCTGAACTGCCGTCTGGCCGTACCGAACTTCGCCAGAGGCTGCCCCTTCACCTGCACCTTCTGCTCGC AGTGGCAGTTCTGGCGCCGGTACCGCGCCCGCAGCCCGAAGAACTTCGTGGACGAAATCGAGATTCTGGTCAAGAAATAC AAAGTAGGCTTCTTCATTCTCGCCGACGAAGAGCCGACCATTAACAAGCAGAAGTTCGTTTCGCTCTGCCAAGAACTGAT CGACCGCAAGCTCGACGTCACTTGGGGCATCAACACCCGTGTGACCGACATCATGCGTGACGAAGACCTCCTGCCGTTCT ACCGCAAGGCCGGCTTGGTGCACGTCTCTCTCGGCACCGAGGCCGCGAGCCAGATGAACCTGAACCGCTTCCGCAAGGAA ACCACCATCGAAGAGAACAAGTACGCCATCAAGCTGCTCCAGAAAAACGGCATCGTAGCGGAAGCGCAGTTCGTGATGGG TCTCGAGCACGAAACTCCAGAGACCATCGAAGAGACCTACCAGCTCTGCAAGGACTGGGATCCCGACATGGCCAACTGGA CGATCTACACGCCGTGGCCCTTCTCCGACCTCTTCAAGGAGCTTGGCGACCGCGTCGAAGTGCGTGACTACTCTCGCTAC AACTTCGTCTCGCCGATCATCAAGCCAGACAACATGGAACGCGAGGACGTGCTCAAGGGCGTGCTGAAATCGTACGGTCG CTTTTACGCTCGCAAGACCTTCTTCAGCTACCCGTGGATCAAGGATCCGTATGTGCGCAAGTACATGCTCGGCTGCCTAA AAGCGTTCGCGAAGACTACGCTCACCAAGCGTTTCTACGACATCGACCGCGTCAAGACCAAGAACCGCAAGATCGAGATC GACCTCGGTTTCGACCAGTCGCGAATCCTGACGCAGGAAGAGGCGAAGAACCTGAAAGAGCGGAGGCCAGAAATGATCGC CGACATGAGCTTCGGTCTCAAGGAAGCCGGCTACCAGCGAGAGCACGACGAACACAACTGGGACGAGTTCGACGAATCAA CGATCAGGGATCGTACATCCAGCACCGTCCGCAACTGCTGA
Upstream 100 bases:
>100_bases GAATTTTTTACAGCGCACACAGCGTTGCATAACAAGCGTGTAACCACATGCCGATCCAGTCGAATTTGTACACAACAATC TATCCGGAGGGTGGAAACAG
Downstream 100 bases:
>100_bases TCGTCAGCGACAACATCAACAGAAAACCCTCCGAACTCCGGGGGGTTTCTGTTTTTCTGATTCTCCCCTCTCTCAATCAT ACCAGAACGAACAGGCGACA
Product: magnesium-protoporphyrin IX monomethyl ester oxidative cyclase, 66 kDa subunit
Products: NA
Alternate protein names: Anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MKILMIQPNYHSGGAEIAGNWTPSWVAYIGGALKQAGFNQVKFVDAMADDLPDETIEEIIRKNQPDVVMTTNITPSIFKA QDIMKIAKKVNKNIRTIMGGIHSTFMYPQVLTEAPETDYVVRGEGEEVTVNLMKAIAAGNDKETRSEITGIAYIDENGKV FATAAHPVIEDLDTLSPDWSLYDWDKYIYTPLNCRLAVPNFARGCPFTCTFCSQWQFWRRYRARSPKNFVDEIEILVKKY KVGFFILADEEPTINKQKFVSLCQELIDRKLDVTWGINTRVTDIMRDEDLLPFYRKAGLVHVSLGTEAASQMNLNRFRKE TTIEENKYAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWTIYTPWPFSDLFKELGDRVEVRDYSRY NFVSPIIKPDNMEREDVLKGVLKSYGRFYARKTFFSYPWIKDPYVRKYMLGCLKAFAKTTLTKRFYDIDRVKTKNRKIEI DLGFDQSRILTQEEAKNLKERRPEMIADMSFGLKEAGYQREHDEHNWDEFDESTIRDRTSSTVRNC
Sequences:
>Translated_546_residues MKILMIQPNYHSGGAEIAGNWTPSWVAYIGGALKQAGFNQVKFVDAMADDLPDETIEEIIRKNQPDVVMTTNITPSIFKA QDIMKIAKKVNKNIRTIMGGIHSTFMYPQVLTEAPETDYVVRGEGEEVTVNLMKAIAAGNDKETRSEITGIAYIDENGKV FATAAHPVIEDLDTLSPDWSLYDWDKYIYTPLNCRLAVPNFARGCPFTCTFCSQWQFWRRYRARSPKNFVDEIEILVKKY KVGFFILADEEPTINKQKFVSLCQELIDRKLDVTWGINTRVTDIMRDEDLLPFYRKAGLVHVSLGTEAASQMNLNRFRKE TTIEENKYAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWTIYTPWPFSDLFKELGDRVEVRDYSRY NFVSPIIKPDNMEREDVLKGVLKSYGRFYARKTFFSYPWIKDPYVRKYMLGCLKAFAKTTLTKRFYDIDRVKTKNRKIEI DLGFDQSRILTQEEAKNLKERRPEMIADMSFGLKEAGYQREHDEHNWDEFDESTIRDRTSSTVRNC >Mature_546_residues MKILMIQPNYHSGGAEIAGNWTPSWVAYIGGALKQAGFNQVKFVDAMADDLPDETIEEIIRKNQPDVVMTTNITPSIFKA QDIMKIAKKVNKNIRTIMGGIHSTFMYPQVLTEAPETDYVVRGEGEEVTVNLMKAIAAGNDKETRSEITGIAYIDENGKV FATAAHPVIEDLDTLSPDWSLYDWDKYIYTPLNCRLAVPNFARGCPFTCTFCSQWQFWRRYRARSPKNFVDEIEILVKKY KVGFFILADEEPTINKQKFVSLCQELIDRKLDVTWGINTRVTDIMRDEDLLPFYRKAGLVHVSLGTEAASQMNLNRFRKE TTIEENKYAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWTIYTPWPFSDLFKELGDRVEVRDYSRY NFVSPIIKPDNMEREDVLKGVLKSYGRFYARKTFFSYPWIKDPYVRKYMLGCLKAFAKTTLTKRFYDIDRVKTKNRKIEI DLGFDQSRILTQEEAKNLKERRPEMIADMSFGLKEAGYQREHDEHNWDEFDESTIRDRTSSTVRNC
Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis in anaerobic conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-prot
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011772 - InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 63405; Mature: 63405
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILMIQPNYHSGGAEIAGNWTPSWVAYIGGALKQAGFNQVKFVDAMADDLPDETIEEII CEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH RKNQPDVVMTTNITPSIFKAQDIMKIAKKVNKNIRTIMGGIHSTFMYPQVLTEAPETDYV HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE VRGEGEEVTVNLMKAIAAGNDKETRSEITGIAYIDENGKVFATAAHPVIEDLDTLSPDWS EECCCCEEHHHHHHHHHCCCCHHHHHHHCEEEEECCCCCEEEEECCHHHHHHHHCCCCCC LYDWDKYIYTPLNCRLAVPNFARGCPFTCTFCSQWQFWRRYRARSPKNFVDEIEILVKKY EEECCCEEECCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH KVGFFILADEEPTINKQKFVSLCQELIDRKLDVTWGINTRVTDIMRDEDLLPFYRKAGLV CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCHHHHHCCEE HVSLGTEAASQMNLNRFRKETTIEENKYAIKLLQKNGIVAEAQFVMGLEHETPETIEETY EEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCHHHHHHHH QLCKDWDPDMANWTIYTPWPFSDLFKELGDRVEVRDYSRYNFVSPIIKPDNMEREDVLKG HHHHCCCCCCCCEEEECCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHH VLKSYGRFYARKTFFSYPWIKDPYVRKYMLGCLKAFAKTTLTKRFYDIDRVKTKNRKIEI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DLGFDQSRILTQEEAKNLKERRPEMIADMSFGLKEAGYQREHDEHNWDEFDESTIRDRTS EECCCHHHHCCHHHHHHHHHHCHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH STVRNC HHHCCC >Mature Secondary Structure MKILMIQPNYHSGGAEIAGNWTPSWVAYIGGALKQAGFNQVKFVDAMADDLPDETIEEII CEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH RKNQPDVVMTTNITPSIFKAQDIMKIAKKVNKNIRTIMGGIHSTFMYPQVLTEAPETDYV HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE VRGEGEEVTVNLMKAIAAGNDKETRSEITGIAYIDENGKVFATAAHPVIEDLDTLSPDWS EECCCCEEHHHHHHHHHCCCCHHHHHHHCEEEEECCCCCEEEEECCHHHHHHHHCCCCCC LYDWDKYIYTPLNCRLAVPNFARGCPFTCTFCSQWQFWRRYRARSPKNFVDEIEILVKKY EEECCCEEECCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH KVGFFILADEEPTINKQKFVSLCQELIDRKLDVTWGINTRVTDIMRDEDLLPFYRKAGLV CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCHHHHHCCEE HVSLGTEAASQMNLNRFRKETTIEENKYAIKLLQKNGIVAEAQFVMGLEHETPETIEETY EEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCHHHHHHHH QLCKDWDPDMANWTIYTPWPFSDLFKELGDRVEVRDYSRYNFVSPIIKPDNMEREDVLKG HHHHCCCCCCCCEEEECCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHH VLKSYGRFYARKTFFSYPWIKDPYVRKYMLGCLKAFAKTTLTKRFYDIDRVKTKNRKIEI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DLGFDQSRILTQEEAKNLKERRPEMIADMSFGLKEAGYQREHDEHNWDEFDESTIRDRTS EECCCHHHHCCHHHHHHHHHHCHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH STVRNC HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA