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The map label for this gene is csmC

Identifier: 21674755

GI number: 21674755

Start: 1836033

End: 1836452

Strand: Reverse

Name: csmC

Synonym: CT1943

Alternate gene names: 21674755

Gene position: 1836452-1836033 (Counterclockwise)

Preceding gene: 21674757

Following gene: 21674754

Centisome position: 85.22

GC content: 51.43

Gene sequence:

>420_bases
ATGTCAGAATCGTATCAGAAACTTCGTAAGGACTTCAAGGAACTTGATTTTACCGACAGGCTGACCTTTCTTGCGGAAAG
CCTGCTCCTGACCGGTCAGAGCGCCATCGTTGGCGGGCTTGAGGTCGCTGGCAGGGTTGTAGAAACGGTTACGGGAACAG
TTGGTTCTTTGATCGATGCATCTGGTATCACCAATATACTTGGTGGTTCGGGCGGAGTTGTTGGGGAAACCATTGATCGC
GTTGCGATTACCGTGAAGGACGTGTCCCGTTCGGCAGGTGAGCTGTACAACGATGCAGTGAGGAATGTCGAAAACGCGAC
CAGCAACGCGGCAAAAGCGGTTGGTGATGTAGGGGTTTCGGCGTCTGAGGCAGTTAAGAACATTGCTGGCTCATTCCAGA
AAACAACCGGAAACAAGTAA

Upstream 100 bases:

>100_bases
AGCATGGCTGATTTTTTTATTAGGTTTAAGTAGATGTAAATTTCACCATAAAACCAGTAACCGGTGGCTGCACCGGCCGT
CGGCAAAAAGGAGAAGTACC

Downstream 100 bases:

>100_bases
GGCCGTTTTCCCCGGCGGCCATCGCCAAGGCATAGAGGCGGTTGGCCCATGAAATCTTTTATTTGTGTTTTTTCGTTTAT
TCGATTATTTTTGTCTTAGA

Product: chlorosome envelope protein C

Products: NA

Alternate protein names: 14 kDa chlorosome protein

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSESYQKLRKDFKELDFTDRLTFLAESLLLTGQSAIVGGLEVAGRVVETVTGTVGSLIDASGITNILGGSGGVVGETIDR
VAITVKDVSRSAGELYNDAVRNVENATSNAAKAVGDVGVSASEAVKNIAGSFQKTTGNK

Sequences:

>Translated_139_residues
MSESYQKLRKDFKELDFTDRLTFLAESLLLTGQSAIVGGLEVAGRVVETVTGTVGSLIDASGITNILGGSGGVVGETIDR
VAITVKDVSRSAGELYNDAVRNVENATSNAAKAVGDVGVSASEAVKNIAGSFQKTTGNK
>Mature_138_residues
SESYQKLRKDFKELDFTDRLTFLAESLLLTGQSAIVGGLEVAGRVVETVTGTVGSLIDASGITNILGGSGGVVGETIDRV
AITVKDVSRSAGELYNDAVRNVENATSNAAKAVGDVGVSASEAVKNIAGSFQKTTGNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Chlorosome

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CSMC_CHLTE (Q46367)

Other databases:

- EMBL:   U09866
- EMBL:   AE006470
- RefSeq:   NP_662820.1
- GeneID:   1008246
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT1943
- NMPDR:   fig|194439.1.peg.1914
- TIGR:   CT1943
- HOGENOM:   HBG405483
- OMA:   RVAITVK
- ProtClustDB:   CLSK638012
- BioCyc:   CTEP194439:CT_1943-MONOMER
- GO:   GO:0046858
- GO:   GO:0015979
- InterPro:   IPR020995

Pfam domain/function: PF11098 Chlorosome_CsmC

EC number: NA

Molecular weight: Translated: 14325; Mature: 14194

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESYQKLRKDFKELDFTDRLTFLAESLLLTGQSAIVGGLEVAGRVVETVTGTVGSLIDA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGITNILGGSGGVVGETIDRVAITVKDVSRSAGELYNDAVRNVENATSNAAKAVGDVGVS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASEAVKNIAGSFQKTTGNK
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SESYQKLRKDFKELDFTDRLTFLAESLLLTGQSAIVGGLEVAGRVVETVTGTVGSLIDA
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGITNILGGSGGVVGETIDRVAITVKDVSRSAGELYNDAVRNVENATSNAAKAVGDVGVS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASEAVKNIAGSFQKTTGNK
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901