| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674715
Identifier: 21674715
GI number: 21674715
Start: 1801054
End: 1802556
Strand: Direct
Name: 21674715
Synonym: CT1903
Alternate gene names: NA
Gene position: 1801054-1802556 (Clockwise)
Preceding gene: 21674714
Following gene: 21674718
Centisome position: 83.58
GC content: 57.09
Gene sequence:
>1503_bases ATGAACATTCTGCTGCTCTATCCGGAATTTCCGGACACCTTCTGGAGTTTCAAGCACGCCCTCAAGTTCGTCAGAAAAAA GGCATCGCTGCCGCCGCTCGGCCTCCTGACCGTGGCTTCAATGCTTCCGCCCGCCTGGCAGCGGCGGCTGGTCGATCTCA ACGTCCGCAAGCTCCGCAGTGAGGATATTGCCTGGGCTGACCTTGCATTCGTCAGCGCGATGGCCGTGCAGCAGGATTCC GCTCGCGAGGCAATCGCACGCTGCAAGGCTGCCGGATTGCCGGTGGTCGCCGGAGGCCCGCTTTTCACCACCGGTTATGC CGAATTTCCCGAGGTTGACTATTTCGTGCTGAACGAGGCTGAAATCACCCTTCCACGCTTCATCGCGGATCTCGAAAACG GAGTTCCGGAGCGCTACTATACCGCCGATGAATTCCCGGCGCTTGGTTGCACACCGGTACCGGAGTGGAAGCTGCTCGAC ATGAAACAGTACGCCTCAATGGCCATACAGTTTTCGCGCGGCTGCCCATACCGCTGCGATTTCTGCAACGTCACGGCCCT GTTCGGCCACAAAATCCGCACCAAAACCAGCTCACAGATCATCGCCGAGCTGGAGGAACTTCGACGGCACGGATGGCAGG ATAGCGTCTTTTTCGTGGACGACAACTTCATCGCCCACCGCGCCTACCTCAAAAAAGAGCTGCTTCCGGCGCTGATCGAA TGGCGAAAAACGAAAGGCGCAACCAACGAGTTCTACACGGAGTGCTCAATCAATCTGGCCGATGATGCCGAACTGATGAA GCTGATGGTAGACGCGGGTTTCAACCGGGTGTTCATCGGCATCGAAACGCCGGAAGTCACCGCTTTGCAAGCATGCGGCA AACAGCACAACACCTCGCGCGACATGCTCGACAACATCCGCAAAATCCAGAATGCAGGCCTCGAGGTGCAAGGAGGCTTT ATCGTGGGCTTCGACAGCGACACACCGTCGATCTTCCAGAAACAGATCGAGTTCATCCAGAAGAGCGGCATCGTCACCGC GATGGTTGGCATTTTACAGGCCCTGCCTGGCACGAAGCTTTATGAGCGACTGAAAAACGAGGGACGCCTGTTGCCCCATT CAAGCGGCGACAATGCAGACGGCAACACCAACATCGTGCCGATGATGGATCCCGAAATCCTGCGCAGGGGGTACAGGGAG ATGATGAAGCACCTCTATGCTCCGAAATACTACTACCAGCGCATCCGCACGCTGCTGGAGGCGTACCGGGCCCCACAACT GAAAAGCCGTTTCAGGATGAGCCAGTTCATGGCTTTCATGCGCTCGACAGTGATGCTTGGCGTCATTGGCAGGGAACGTT TCCAGTACTGGAAAATGCTCGCCTGGACGGCCGTAAACCGTCGGCAGGCACTGCCGCTGGCGGTAACGCTTGCCATCTAC GGCCACCATTTCCGGAAGGTCTGCTCCCTGCATCTGAAAGAACGGCAACATGGAAGTATATGA
Upstream 100 bases:
>100_bases AACTTGACCTGACGTTGAACCGGTGGCTCTCACGCCCGGCACCGGACGCTTTGCCCCGGCTCGAATGACCAATCCGCAAC GCTATCGGAAAGAGAAGCCT
Downstream 100 bases:
>100_bases ACTTCAGATCATCACGGATTTGTATGTTCACATAATAAAGATTATTATAAACTTTCTGGACAACGGTTGGGCCAGAGGCT TTCAAGTGATTTGTGCTTTT
Product: BchE/P-methylase family protein
Products: NA
Alternate protein names: ORF N [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MNILLLYPEFPDTFWSFKHALKFVRKKASLPPLGLLTVASMLPPAWQRRLVDLNVRKLRSEDIAWADLAFVSAMAVQQDS AREAIARCKAAGLPVVAGGPLFTTGYAEFPEVDYFVLNEAEITLPRFIADLENGVPERYYTADEFPALGCTPVPEWKLLD MKQYASMAIQFSRGCPYRCDFCNVTALFGHKIRTKTSSQIIAELEELRRHGWQDSVFFVDDNFIAHRAYLKKELLPALIE WRKTKGATNEFYTECSINLADDAELMKLMVDAGFNRVFIGIETPEVTALQACGKQHNTSRDMLDNIRKIQNAGLEVQGGF IVGFDSDTPSIFQKQIEFIQKSGIVTAMVGILQALPGTKLYERLKNEGRLLPHSSGDNADGNTNIVPMMDPEILRRGYRE MMKHLYAPKYYYQRIRTLLEAYRAPQLKSRFRMSQFMAFMRSTVMLGVIGRERFQYWKMLAWTAVNRRQALPLAVTLAIY GHHFRKVCSLHLKERQHGSI
Sequences:
>Translated_500_residues MNILLLYPEFPDTFWSFKHALKFVRKKASLPPLGLLTVASMLPPAWQRRLVDLNVRKLRSEDIAWADLAFVSAMAVQQDS AREAIARCKAAGLPVVAGGPLFTTGYAEFPEVDYFVLNEAEITLPRFIADLENGVPERYYTADEFPALGCTPVPEWKLLD MKQYASMAIQFSRGCPYRCDFCNVTALFGHKIRTKTSSQIIAELEELRRHGWQDSVFFVDDNFIAHRAYLKKELLPALIE WRKTKGATNEFYTECSINLADDAELMKLMVDAGFNRVFIGIETPEVTALQACGKQHNTSRDMLDNIRKIQNAGLEVQGGF IVGFDSDTPSIFQKQIEFIQKSGIVTAMVGILQALPGTKLYERLKNEGRLLPHSSGDNADGNTNIVPMMDPEILRRGYRE MMKHLYAPKYYYQRIRTLLEAYRAPQLKSRFRMSQFMAFMRSTVMLGVIGRERFQYWKMLAWTAVNRRQALPLAVTLAIY GHHFRKVCSLHLKERQHGSI >Mature_500_residues MNILLLYPEFPDTFWSFKHALKFVRKKASLPPLGLLTVASMLPPAWQRRLVDLNVRKLRSEDIAWADLAFVSAMAVQQDS AREAIARCKAAGLPVVAGGPLFTTGYAEFPEVDYFVLNEAEITLPRFIADLENGVPERYYTADEFPALGCTPVPEWKLLD MKQYASMAIQFSRGCPYRCDFCNVTALFGHKIRTKTSSQIIAELEELRRHGWQDSVFFVDDNFIAHRAYLKKELLPALIE WRKTKGATNEFYTECSINLADDAELMKLMVDAGFNRVFIGIETPEVTALQACGKQHNTSRDMLDNIRKIQNAGLEVQGGF IVGFDSDTPSIFQKQIEFIQKSGIVTAMVGILQALPGTKLYERLKNEGRLLPHSSGDNADGNTNIVPMMDPEILRRGYRE MMKHLYAPKYYYQRIRTLLEAYRAPQLKSRFRMSQFMAFMRSTVMLGVIGRERFQYWKMLAWTAVNRRQALPLAVTLAIY GHHFRKVCSLHLKERQHGSI
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 57106; Mature: 57106
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILLLYPEFPDTFWSFKHALKFVRKKASLPPLGLLTVASMLPPAWQRRLVDLNVRKLRS CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHCC EDIAWADLAFVSAMAVQQDSAREAIARCKAAGLPVVAGGPLFTTGYAEFPEVDYFVLNEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCEEEECCC EITLPRFIADLENGVPERYYTADEFPALGCTPVPEWKLLDMKQYASMAIQFSRGCPYRCD CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCC FCNVTALFGHKIRTKTSSQIIAELEELRRHGWQDSVFFVDDNFIAHRAYLKKELLPALIE CCCHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH WRKTKGATNEFYTECSINLADDAELMKLMVDAGFNRVFIGIETPEVTALQACGKQHNTSR HHHCCCCCCHHHHEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCHH DMLDNIRKIQNAGLEVQGGFIVGFDSDTPSIFQKQIEFIQKSGIVTAMVGILQALPGTKL HHHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH YERLKNEGRLLPHSSGDNADGNTNIVPMMDPEILRRGYREMMKHLYAPKYYYQRIRTLLE HHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AYRAPQLKSRFRMSQFMAFMRSTVMLGVIGRERFQYWKMLAWTAVNRRQALPLAVTLAIY HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH GHHFRKVCSLHLKERQHGSI HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNILLLYPEFPDTFWSFKHALKFVRKKASLPPLGLLTVASMLPPAWQRRLVDLNVRKLRS CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHCC EDIAWADLAFVSAMAVQQDSAREAIARCKAAGLPVVAGGPLFTTGYAEFPEVDYFVLNEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCEEEECCC EITLPRFIADLENGVPERYYTADEFPALGCTPVPEWKLLDMKQYASMAIQFSRGCPYRCD CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCC FCNVTALFGHKIRTKTSSQIIAELEELRRHGWQDSVFFVDDNFIAHRAYLKKELLPALIE CCCHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH WRKTKGATNEFYTECSINLADDAELMKLMVDAGFNRVFIGIETPEVTALQACGKQHNTSR HHHCCCCCCHHHHEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCHH DMLDNIRKIQNAGLEVQGGFIVGFDSDTPSIFQKQIEFIQKSGIVTAMVGILQALPGTKL HHHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH YERLKNEGRLLPHSSGDNADGNTNIVPMMDPEILRRGYREMMKHLYAPKYYYQRIRTLLE HHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AYRAPQLKSRFRMSQFMAFMRSTVMLGVIGRERFQYWKMLAWTAVNRRQALPLAVTLAIY HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH GHHFRKVCSLHLKERQHGSI HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231; 8467083 [H]