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The map label for this gene is ylbK [H]

Identifier: 21674697

GI number: 21674697

Start: 1784158

End: 1784940

Strand: Reverse

Name: ylbK [H]

Synonym: CT1885

Alternate gene names: 21674697

Gene position: 1784940-1784158 (Counterclockwise)

Preceding gene: 21674698

Following gene: 21674695

Centisome position: 82.83

GC content: 62.96

Gene sequence:

>783_bases
ATGAGTACAACAGAGAACGTATCGGAACGAACCGGCCTGGCCTTCGGCGGCGGCGTGGTGCTTGGCGCGGCGCACATCGG
CGTGCTCAAGGCGATGGAGGAGACCGGCTTCAGGGCAGAGTGCGTGTCGGGCACCAGCATCGGTTCGTTCATCGCGGCGA
TGTACGCTTTCGGCAAGAGCTGGCGGGAGATCGAAGCAGTCGCCCTCGAGCTGGACTGGTCTGATCTGTCGGGCCTCACC
CTCTCCGGCTACGGACTGCTCTCGATCCGCAAGTTTGGCAAGATCGTCCGCGCCCAGCTCGGTTCCCGCCGCATCGAGGA
TGCGCCGCTTCCTCTCGCCATCGTCGCCACCGACATCTGCACCGGAAACGAGGTGGTGCTGCGCGAGGGCGACGTGGCCA
CGGCGGTGATGGCCAGCTCGTCGATTCCGGGCATTTTCAAGCCGGTGGAGCAGGGAGAGATGCTGCTGGTCGATGGCGTG
CTGACCGAGAATGTGCCGGTTTCTCCGCTCAAGGAGATGGGCGCGAGCCGGATCGCGTGCATCGACCTTTTTGGCCGCCA
CTCCTTCCGCCGGCCAGAGCATCTGTCCGATTTGTTGCTTAACGCTTTTTACAGCGCCATGCGCGCCATTTCGCAGATTC
AGATCAGCAAAGCCGATCTGGTCATCGCTCCCGATCTCTCCCGCTTCAGCCTGGTCGATATGTCAGCCGTGCCGGAGATT
CTCGACACGGGATACAGGGAGGCACTGCCCTTGCTCGAATCCTGGCGAGACGCGCACCGGTGA

Upstream 100 bases:

>100_bases
GACCGGGGCGGTTTTCCCGACCCGGATCTGCGTTATCCACCCTACAGTTCAGGCCGTTTTGACCTGCTCAAAAAAATTGT
CACCCTCTTTTCATAGGCTT

Downstream 100 bases:

>100_bases
GCCTCCGGGCCTGTTCGCCCATGCGGTTTGCGTCGGTCTGCTCTTTTTTGTACAATGATAATTGTTTCCTTTCGACTTAT
TCATGGCCGGTTCCTTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSTTENVSERTGLAFGGGVVLGAAHIGVLKAMEETGFRAECVSGTSIGSFIAAMYAFGKSWREIEAVALELDWSDLSGLT
LSGYGLLSIRKFGKIVRAQLGSRRIEDAPLPLAIVATDICTGNEVVLREGDVATAVMASSSIPGIFKPVEQGEMLLVDGV
LTENVPVSPLKEMGASRIACIDLFGRHSFRRPEHLSDLLLNAFYSAMRAISQIQISKADLVIAPDLSRFSLVDMSAVPEI
LDTGYREALPLLESWRDAHR

Sequences:

>Translated_260_residues
MSTTENVSERTGLAFGGGVVLGAAHIGVLKAMEETGFRAECVSGTSIGSFIAAMYAFGKSWREIEAVALELDWSDLSGLT
LSGYGLLSIRKFGKIVRAQLGSRRIEDAPLPLAIVATDICTGNEVVLREGDVATAVMASSSIPGIFKPVEQGEMLLVDGV
LTENVPVSPLKEMGASRIACIDLFGRHSFRRPEHLSDLLLNAFYSAMRAISQIQISKADLVIAPDLSRFSLVDMSAVPEI
LDTGYREALPLLESWRDAHR
>Mature_259_residues
STTENVSERTGLAFGGGVVLGAAHIGVLKAMEETGFRAECVSGTSIGSFIAAMYAFGKSWREIEAVALELDWSDLSGLTL
SGYGLLSIRKFGKIVRAQLGSRRIEDAPLPLAIVATDICTGNEVVLREGDVATAVMASSSIPGIFKPVEQGEMLLVDGVL
TENVPVSPLKEMGASRIACIDLFGRHSFRRPEHLSDLLLNAFYSAMRAISQIQISKADLVIAPDLSRFSLVDMSAVPEIL
DTGYREALPLLESWRDAHR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=277, Percent_Identity=27.4368231046931, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI260656041, Length=277, Percent_Identity=27.4368231046931, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI116256487, Length=277, Percent_Identity=27.4368231046931, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI260656043, Length=277, Percent_Identity=27.4368231046931, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI260656037, Length=277, Percent_Identity=27.4368231046931, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI148727335, Length=280, Percent_Identity=25, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI148727290, Length=280, Percent_Identity=25, Blast_Score=79, Evalue=3e-15,
Organism=Escherichia coli, GI226510936, Length=176, Percent_Identity=34.6590909090909, Blast_Score=96, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71997299, Length=164, Percent_Identity=29.8780487804878, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71997289, Length=164, Percent_Identity=29.8780487804878, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=199, Percent_Identity=29.1457286432161, Blast_Score=85, Evalue=9e-18,
Organism=Drosophila melanogaster, GI281376913, Length=271, Percent_Identity=29.520295202952, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571388, Length=271, Percent_Identity=28.0442804428044, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 27986; Mature: 27854

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTENVSERTGLAFGGGVVLGAAHIGVLKAMEETGFRAECVSGTSIGSFIAAMYAFGKS
CCCCCCHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCC
WREIEAVALELDWSDLSGLTLSGYGLLSIRKFGKIVRAQLGSRRIEDAPLPLAIVATDIC
HHEEEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC
TGNEVVLREGDVATAVMASSSIPGIFKPVEQGEMLLVDGVLTENVPVSPLKEMGASRIAC
CCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCEEEEECEECCCCCCCHHHHCCCCHHHH
IDLFGRHSFRRPEHLSDLLLNAFYSAMRAISQIQISKADLVIAPDLSRFSLVDMSAVPEI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHEEHHHHHHHHH
LDTGYREALPLLESWRDAHR
HHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STTENVSERTGLAFGGGVVLGAAHIGVLKAMEETGFRAECVSGTSIGSFIAAMYAFGKS
CCCCCHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCC
WREIEAVALELDWSDLSGLTLSGYGLLSIRKFGKIVRAQLGSRRIEDAPLPLAIVATDIC
HHEEEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC
TGNEVVLREGDVATAVMASSSIPGIFKPVEQGEMLLVDGVLTENVPVSPLKEMGASRIAC
CCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCEEEEECEECCCCCCCHHHHCCCCHHHH
IDLFGRHSFRRPEHLSDLLLNAFYSAMRAISQIQISKADLVIAPDLSRFSLVDMSAVPEI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHEEHHHHHHHHH
LDTGYREALPLLESWRDAHR
HHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]