| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674678
Identifier: 21674678
GI number: 21674678
Start: 1764905
End: 1765492
Strand: Reverse
Name: 21674678
Synonym: CT1866
Alternate gene names: NA
Gene position: 1765492-1764905 (Counterclockwise)
Preceding gene: 21674679
Following gene: 21674675
Centisome position: 81.93
GC content: 55.78
Gene sequence:
>588_bases ATGGCTATGAAAAAGGACATCCTTGAGCGCTACGACCGTCTGGATGACGGCCGCGTCGTCATCGACGTCTATGCGTCGAA GGTGGAGGAGCTGTACGAGGATTTCGACAAGCAGGCGCCGTTTCACCGCAAAGACCTCGACGAGGAACTCGCCGCTTACC TGTTTGACTGCGTGCGTGAAATAGGTCGGGTCGATTTCATCATCCGCATTACGCTCGATGCTGTTCCGTCCGCCGAGCTT CAGGAGCGTATCAGGACGAGTTTGAAAAAATTCTTTATCTACCAGCGCGGACTGGAGTCGGCCTCGATGCAGCAGCTGCT GAGGAAATCCCTGCTCTTTTTTCTTTCCGGCATGGCGCTGCTTTTTTTTTCGTTATGGTTTGGCGGGAGCATGATTCCGG AGGTGCGGCAGCTCGTTTACGAACGGGTGCTGGTCGAGGGCGTGACCATTGCGTCCTGGGTGTCGATCTGGGAGTCACTG AGCATTCTCATGTTCAACTGGTGGCCTGCAAGGCTGCGGATCAGGCTGAACTCCCGCATTGCTGATGCTGAAGTGCAGTT TCAGAGCCATCCGGGCATCCGGCGCTGA
Upstream 100 bases:
>100_bases GGGAAGCGGGAAGTAAGGCAAGAAGGGGAGGGGGCGGCGGAGATCCGCTCTTTCCATTCGATACAAAGCGCGGCAACGGT TTTCACCACCATGATGCGCG
Downstream 100 bases:
>100_bases ATGGCGCGCCGGACGGCTTTATGCGGGCTGACTTTTTTGTCGCAACGAAAAAAGCTTTATCTTTGCTGATTATTATAAAA AAGCCAGCGGACTTCTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAMKKDILERYDRLDDGRVVIDVYASKVEELYEDFDKQAPFHRKDLDEELAAYLFDCVREIGRVDFIIRITLDAVPSAEL QERIRTSLKKFFIYQRGLESASMQQLLRKSLLFFLSGMALLFFSLWFGGSMIPEVRQLVYERVLVEGVTIASWVSIWESL SILMFNWWPARLRIRLNSRIADAEVQFQSHPGIRR
Sequences:
>Translated_195_residues MAMKKDILERYDRLDDGRVVIDVYASKVEELYEDFDKQAPFHRKDLDEELAAYLFDCVREIGRVDFIIRITLDAVPSAEL QERIRTSLKKFFIYQRGLESASMQQLLRKSLLFFLSGMALLFFSLWFGGSMIPEVRQLVYERVLVEGVTIASWVSIWESL SILMFNWWPARLRIRLNSRIADAEVQFQSHPGIRR >Mature_194_residues AMKKDILERYDRLDDGRVVIDVYASKVEELYEDFDKQAPFHRKDLDEELAAYLFDCVREIGRVDFIIRITLDAVPSAELQ ERIRTSLKKFFIYQRGLESASMQQLLRKSLLFFLSGMALLFFSLWFGGSMIPEVRQLVYERVLVEGVTIASWVSIWESLS ILMFNWWPARLRIRLNSRIADAEVQFQSHPGIRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22962; Mature: 22831
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKKDILERYDRLDDGRVVIDVYASKVEELYEDFDKQAPFHRKDLDEELAAYLFDCVRE CCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IGRVDFIIRITLDAVPSAELQERIRTSLKKFFIYQRGLESASMQQLLRKSLLFFLSGMAL HHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LFFSLWFGGSMIPEVRQLVYERVLVEGVTIASWVSIWESLSILMFNWWPARLRIRLNSRI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCC ADAEVQFQSHPGIRR CCHHEEECCCCCCCC >Mature Secondary Structure AMKKDILERYDRLDDGRVVIDVYASKVEELYEDFDKQAPFHRKDLDEELAAYLFDCVRE CHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IGRVDFIIRITLDAVPSAELQERIRTSLKKFFIYQRGLESASMQQLLRKSLLFFLSGMAL HHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LFFSLWFGGSMIPEVRQLVYERVLVEGVTIASWVSIWESLSILMFNWWPARLRIRLNSRI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCC ADAEVQFQSHPGIRR CCHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA