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The map label for this gene is cydA [H]

Identifier: 21674632

GI number: 21674632

Start: 1721597

End: 1722952

Strand: Direct

Name: cydA [H]

Synonym: CT1818

Alternate gene names: 21674632

Gene position: 1721597-1722952 (Clockwise)

Preceding gene: 21674631

Following gene: 21674633

Centisome position: 79.89

GC content: 60.32

Gene sequence:

>1356_bases
ATGGATACCCTGTTTCTTGCGCGACTTCAATTCGCCCTGACGTCGGTGTTCCACTTTTTCTTTGTTCCCCTCACCCTCGG
GCTCTCCATCTTCACGGCGATCATGGAAACTGCGTGGGTCAGGACGGGCAAGGAGAAGTACCGTCAGCTGGCCAAATTCT
GGGGGCATCTGTTCCTCATCAACTTCGCCATCGGCGTCGTCACCGGCATCGTCATGGAGTTCCAGTTCGGCATGAACTGG
TCGCAGTACTCCCGCTTCGTCGGCGACATCTTCGGCGTGCCGCTTGCCATCGAGGCGCTGCTCGCCTTCTTCCTTGAATC
AACCTTCCTCGGCATCTGGGTCTTCGGCTGGGATCGTATCCCCAAAGGGCTGCACGCCGCCTCGATCTGGCTGGTGGCCA
TCGGCTCGAACCTCTCGGCACTCTGGATTCTGGTCGCCAACTCCTTCATGCAGTCGCCGGTGGGCTTCCACATGGCCGCC
GACGGATCGCGCGCCGAGATGACCAGCTTCTCCGCGCTGCTCTTCAACCCCTACGTCTGGCTGCAATTCCCGCATGTCAT
CACCGCCGGCATCGCCACGGGTGGGTTCCTCGTCATCGCGGTCAGCGTGTGGCACCTTATGAAAAAAACCGCCGACGAGG
AGCAGTTCCGAACCTCGCTCAAGTTCGGCGCGATCTACGCCTTCATCGGCTCGCTGCTCGTCACCCTCGCCGGTCACACC
CAGATGCAGGAGATGGTGCACAACCAGCCGATGAAAGTCGCCGCCGCCGAAGCGCTCTGGCACAGCGAAAATCCGGCCAG
CTTCTCGCTCTTCACCGTCGGTGACGAAGAGAATCTGAAGGATGTCTTCTCCATCCGCGTGCCCGGAATGCTCTCGTTCC
TGGCCTACAACAAGTTCTCTGGCGAGGTGAAGGGCATCAGCGAATTGCAGCAGGAGGCGGTCGCCAAATACGGCCCAGGG
AACTACATTCCGTCGGTCATCACCGCCTACTGGAGTTTCCGCTTCATGGTGGGCGCGGGCACGCTGATGCTCCTGGCCGC
CGTGGTGGCGCTCTTCAAGGTGATCCGCGAAGATTACAATTTCGGCAAGCTCACGGGGGCGCTCCTGCTCTCGGCATTCA
TTCTGCCCTTCGTGGCCAACTCGGCGGGGTGGCTCCTGACCGAGACGGGCCGTCAGCCATGGATCGTGGTCGGGCTGCTC
AAAACCGAACAGGCCGTCACGCCCGCATCGGTAGTAAGCAGCGCTGAATTGCTGACCTCGGTCGTGGTGTTCACCCTCAT
CTACAGCGTGCTGACGCTCGTCGATGTGTTCCTCTTGAAAAAATATGCAACGGCTGGCCTTCACGGCGCCGAATAA

Upstream 100 bases:

>100_bases
TAAAAGTTTACAGCTATTGGTGAATTTTTTGTGGGCGCACGCGGTTTTTTTCATCGTTGTCACAACCAACAACCATACAT
CAACCTTTCAACAATCGATA

Downstream 100 bases:

>100_bases
ACCGAAAAGGAGACAACAATGGATTTGCAGACATTGCAGATAATCTGGTTCATCCTGGTCGCCGTGCTGTTTACCGGATA
CTTCATTCTCGAAGGATTCG

Product: cytochrome d ubiquinol oxidase, subunit I

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MDTLFLARLQFALTSVFHFFFVPLTLGLSIFTAIMETAWVRTGKEKYRQLAKFWGHLFLINFAIGVVTGIVMEFQFGMNW
SQYSRFVGDIFGVPLAIEALLAFFLESTFLGIWVFGWDRIPKGLHAASIWLVAIGSNLSALWILVANSFMQSPVGFHMAA
DGSRAEMTSFSALLFNPYVWLQFPHVITAGIATGGFLVIAVSVWHLMKKTADEEQFRTSLKFGAIYAFIGSLLVTLAGHT
QMQEMVHNQPMKVAAAEALWHSENPASFSLFTVGDEENLKDVFSIRVPGMLSFLAYNKFSGEVKGISELQQEAVAKYGPG
NYIPSVITAYWSFRFMVGAGTLMLLAAVVALFKVIREDYNFGKLTGALLLSAFILPFVANSAGWLLTETGRQPWIVVGLL
KTEQAVTPASVVSSAELLTSVVVFTLIYSVLTLVDVFLLKKYATAGLHGAE

Sequences:

>Translated_451_residues
MDTLFLARLQFALTSVFHFFFVPLTLGLSIFTAIMETAWVRTGKEKYRQLAKFWGHLFLINFAIGVVTGIVMEFQFGMNW
SQYSRFVGDIFGVPLAIEALLAFFLESTFLGIWVFGWDRIPKGLHAASIWLVAIGSNLSALWILVANSFMQSPVGFHMAA
DGSRAEMTSFSALLFNPYVWLQFPHVITAGIATGGFLVIAVSVWHLMKKTADEEQFRTSLKFGAIYAFIGSLLVTLAGHT
QMQEMVHNQPMKVAAAEALWHSENPASFSLFTVGDEENLKDVFSIRVPGMLSFLAYNKFSGEVKGISELQQEAVAKYGPG
NYIPSVITAYWSFRFMVGAGTLMLLAAVVALFKVIREDYNFGKLTGALLLSAFILPFVANSAGWLLTETGRQPWIVVGLL
KTEQAVTPASVVSSAELLTSVVVFTLIYSVLTLVDVFLLKKYATAGLHGAE
>Mature_451_residues
MDTLFLARLQFALTSVFHFFFVPLTLGLSIFTAIMETAWVRTGKEKYRQLAKFWGHLFLINFAIGVVTGIVMEFQFGMNW
SQYSRFVGDIFGVPLAIEALLAFFLESTFLGIWVFGWDRIPKGLHAASIWLVAIGSNLSALWILVANSFMQSPVGFHMAA
DGSRAEMTSFSALLFNPYVWLQFPHVITAGIATGGFLVIAVSVWHLMKKTADEEQFRTSLKFGAIYAFIGSLLVTLAGHT
QMQEMVHNQPMKVAAAEALWHSENPASFSLFTVGDEENLKDVFSIRVPGMLSFLAYNKFSGEVKGISELQQEAVAKYGPG
NYIPSVITAYWSFRFMVGAGTLMLLAAVVALFKVIREDYNFGKLTGALLLSAFILPFVANSAGWLLTETGRQPWIVVGLL
KTEQAVTPASVVSSAELLTSVVVFTLIYSVLTLVDVFLLKKYATAGLHGAE

Specific function: Cytochrome Oxidase Subunit. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=505, Percent_Identity=39.4059405940594, Blast_Score=338, Evalue=6e-94,
Organism=Escherichia coli, GI87081779, Length=503, Percent_Identity=38.3697813121272, Blast_Score=328, Evalue=4e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 49751; Mature: 49751

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLFLARLQFALTSVFHFFFVPLTLGLSIFTAIMETAWVRTGKEKYRQLAKFWGHLFLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NFAIGVVTGIVMEFQFGMNWSQYSRFVGDIFGVPLAIEALLAFFLESTFLGIWVFGWDRI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEHHHC
PKGLHAASIWLVAIGSNLSALWILVANSFMQSPVGFHMAADGSRAEMTSFSALLFNPYVW
CCCHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCE
LQFPHVITAGIATGGFLVIAVSVWHLMKKTADEEQFRTSLKFGAIYAFIGSLLVTLAGHT
EECHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
QMQEMVHNQPMKVAAAEALWHSENPASFSLFTVGDEENLKDVFSIRVPGMLSFLAYNKFS
HHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHCC
GEVKGISELQQEAVAKYGPGNYIPSVITAYWSFRFMVGAGTLMLLAAVVALFKVIREDYN
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FGKLTGALLLSAFILPFVANSAGWLLTETGRQPWIVVGLLKTEQAVTPASVVSSAELLTS
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
VVVFTLIYSVLTLVDVFLLKKYATAGLHGAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDTLFLARLQFALTSVFHFFFVPLTLGLSIFTAIMETAWVRTGKEKYRQLAKFWGHLFLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NFAIGVVTGIVMEFQFGMNWSQYSRFVGDIFGVPLAIEALLAFFLESTFLGIWVFGWDRI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEHHHC
PKGLHAASIWLVAIGSNLSALWILVANSFMQSPVGFHMAADGSRAEMTSFSALLFNPYVW
CCCHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCE
LQFPHVITAGIATGGFLVIAVSVWHLMKKTADEEQFRTSLKFGAIYAFIGSLLVTLAGHT
EECHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
QMQEMVHNQPMKVAAAEALWHSENPASFSLFTVGDEENLKDVFSIRVPGMLSFLAYNKFS
HHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHCC
GEVKGISELQQEAVAKYGPGNYIPSVITAYWSFRFMVGAGTLMLLAAVVALFKVIREDYN
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FGKLTGALLLSAFILPFVANSAGWLLTETGRQPWIVVGLLKTEQAVTPASVVSSAELLTS
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
VVVFTLIYSVLTLVDVFLLKKYATAGLHGAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]