| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is aroE
Identifier: 21674623
GI number: 21674623
Start: 1714662
End: 1715549
Strand: Direct
Name: aroE
Synonym: CT1809
Alternate gene names: 21674623
Gene position: 1714662-1715549 (Clockwise)
Preceding gene: 21674622
Following gene: 21674624
Centisome position: 79.57
GC content: 58.9
Gene sequence:
>888_bases GTGTCAAACTCTCAGTCCAAAAAGATTTTCGGACTCATCGGCAAACACGTCGATTACTCCTGGTCGCCACTGATTCACAA TACCGGATTCGAGGCACTCGGGCTTCCCTGCGTCTACACCATTTTCAACATCCCTTCGCCCGAAATGATCGGCGATGCAC TCAAAGGAAGCCGTGCTCTCGGCATTGCGGGATTCAGCGTAACCATTCCGTACAAGAAAACCGTCGTGCCATTCCTTGAC GAACTCTCACCTGAAGCGCTCTCCATCGGGGCGGTCAACACCATCGTCAACGACAACGGACGGCTGCTCGGCTACAATAC GGACATCGACGGTTTCGCTGCTCCGCTCCTTCCGATGGCGGAGTCGATCCGGAACAGGCCGGTCTGCATCTTCGGCAACG GCGGAGCCGCGCTGGCCGCCGTCGAAGCTTTCAGGCTCCGCTTCAACCCTTCATCGGTGCTCCTCGTGGTGCGGGATACG CAGAAAGCCGAAGATATGCTCGAAGAGTACGCATACCGCGACCTCGTCACCATCCATGCGGGCCGGGAGATCGACCAGCC CGCGTGCAGCAAACTGATCCGCGATTGCCGCGTACTGGTCAACGCAACGCCGGTCGGCACTGCCGGAAGAAACGATCACA TCCACAGCATCCTGCCGACCGGACACGGGCTCCTGCACGATGGCCAGATCGTTTACGACATGGTCTACAATCCGCCCGAA ACACCCCTGCTCGCCGAAGCCCGCGCCGCAGGAGCAACTGTCATTGCGGGCATCGAGATGCTCATCGCCCAGGCCGCCCG TGCCTTCTCCATCTGGACAGGACAGGAACTTCCGGTCGATCTGGTCAGAAAAACCGTACTCGCTGCAATCGAAAAGAGCG AAGGCTGA
Upstream 100 bases:
>100_bases CAAAAAGCAGCTGTTTCAGAGCGTCTTCCCCGAGCTGTACCAGCAAGATGCGGTACGCCGGCTGCTGGAAATTTCCTGAA CCACCAGCGAAACAAACATC
Downstream 100 bases:
>100_bases GGCGGCGGTTTGAAAGAGGCCTGAATGGTATTACATTCTCTTCGACCTCTTTTGACCTCCTGACAACAACACTACTCTAT GGCCCTTTTTTATCTGCTCG
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSNSQSKKIFGLIGKHVDYSWSPLIHNTGFEALGLPCVYTIFNIPSPEMIGDALKGSRALGIAGFSVTIPYKKTVVPFLD ELSPEALSIGAVNTIVNDNGRLLGYNTDIDGFAAPLLPMAESIRNRPVCIFGNGGAALAAVEAFRLRFNPSSVLLVVRDT QKAEDMLEEYAYRDLVTIHAGREIDQPACSKLIRDCRVLVNATPVGTAGRNDHIHSILPTGHGLLHDGQIVYDMVYNPPE TPLLAEARAAGATVIAGIEMLIAQAARAFSIWTGQELPVDLVRKTVLAAIEKSEG
Sequences:
>Translated_295_residues MSNSQSKKIFGLIGKHVDYSWSPLIHNTGFEALGLPCVYTIFNIPSPEMIGDALKGSRALGIAGFSVTIPYKKTVVPFLD ELSPEALSIGAVNTIVNDNGRLLGYNTDIDGFAAPLLPMAESIRNRPVCIFGNGGAALAAVEAFRLRFNPSSVLLVVRDT QKAEDMLEEYAYRDLVTIHAGREIDQPACSKLIRDCRVLVNATPVGTAGRNDHIHSILPTGHGLLHDGQIVYDMVYNPPE TPLLAEARAAGATVIAGIEMLIAQAARAFSIWTGQELPVDLVRKTVLAAIEKSEG >Mature_294_residues SNSQSKKIFGLIGKHVDYSWSPLIHNTGFEALGLPCVYTIFNIPSPEMIGDALKGSRALGIAGFSVTIPYKKTVVPFLDE LSPEALSIGAVNTIVNDNGRLLGYNTDIDGFAAPLLPMAESIRNRPVCIFGNGGAALAAVEAFRLRFNPSSVLLVVRDTQ KAEDMLEEYAYRDLVTIHAGREIDQPACSKLIRDCRVLVNATPVGTAGRNDHIHSILPTGHGLLHDGQIVYDMVYNPPET PLLAEARAAGATVIAGIEMLIAQAARAFSIWTGQELPVDLVRKTVLAAIEKSEG
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1787983, Length=293, Percent_Identity=31.3993174061433, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1789675, Length=269, Percent_Identity=28.996282527881, Blast_Score=90, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320332, Length=303, Percent_Identity=27.0627062706271, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROE_CHLTE (Q8KBH8)
Other databases:
- EMBL: AE006470 - RefSeq: NP_662688.1 - ProteinModelPortal: Q8KBH8 - SMR: Q8KBH8 - GeneID: 1008183 - GenomeReviews: AE006470_GR - KEGG: cte:CT1809 - NMPDR: fig|194439.1.peg.1782 - TIGR: CT1809 - HOGENOM: HBG553408 - OMA: LIHNTAC - ProtClustDB: CLSK637945 - BioCyc: CTEP194439:CT_1809-MONOMER - BRENDA: 1.1.1.25 - HAMAP: MF_00222 - InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR00507
Pfam domain/function: PF08501 Shikimate_dh_N
EC number: =1.1.1.25
Molecular weight: Translated: 31734; Mature: 31603
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: ACT_SITE 72-72
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSQSKKIFGLIGKHVDYSWSPLIHNTGFEALGLPCVYTIFNIPSPEMIGDALKGSRAL CCCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHCCCCEEEEECCCCHHHHHHHHCCCCEE GIAGFSVTIPYKKTVVPFLDELSPEALSIGAVNTIVNDNGRLLGYNTDIDGFAAPLLPMA EEEEEEEECCCHHHHHHHHHHCCCCCEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHH ESIRNRPVCIFGNGGAALAAVEAFRLRFNPSSVLLVVRDTQKAEDMLEEYAYRDLVTIHA HHHCCCCEEEEECCCHHHHHEEHHHEEECCCEEEEEEECCHHHHHHHHHHHHHCEEEEEC GREIDQPACSKLIRDCRVLVNATPVGTAGRNDHIHSILPTGHGLLHDGQIVYDMVYNPPE CCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEECCCCCCEEECCEEEEEEECCCCC TPLLAEARAAGATVIAGIEMLIAQAARAFSIWTGQELPVDLVRKTVLAAIEKSEG CCHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNSQSKKIFGLIGKHVDYSWSPLIHNTGFEALGLPCVYTIFNIPSPEMIGDALKGSRAL CCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHCCCCEEEEECCCCHHHHHHHHCCCCEE GIAGFSVTIPYKKTVVPFLDELSPEALSIGAVNTIVNDNGRLLGYNTDIDGFAAPLLPMA EEEEEEEECCCHHHHHHHHHHCCCCCEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHH ESIRNRPVCIFGNGGAALAAVEAFRLRFNPSSVLLVVRDTQKAEDMLEEYAYRDLVTIHA HHHCCCCEEEEECCCHHHHHEEHHHEEECCCEEEEEEECCHHHHHHHHHHHHHCEEEEEC GREIDQPACSKLIRDCRVLVNATPVGTAGRNDHIHSILPTGHGLLHDGQIVYDMVYNPPE CCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEECCCCCCEEECCEEEEEEECCCCC TPLLAEARAAGATVIAGIEMLIAQAARAFSIWTGQELPVDLVRKTVLAAIEKSEG CCHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901