| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674589
Identifier: 21674589
GI number: 21674589
Start: 1682490
End: 1682711
Strand: Reverse
Name: 21674589
Synonym: CT1775
Alternate gene names: NA
Gene position: 1682711-1682490 (Counterclockwise)
Preceding gene: 21674590
Following gene: 21674588
Centisome position: 78.09
GC content: 47.75
Gene sequence:
>222_bases ATGAATTACAGTTTCAAGACGCTCTGGAATGCGATGTTTCTCGCTGTCGGGCCGGTCTGGTTCGTGCTTGTCTGGATGAT CTGGTCATCCGGACAGCTCAAAACAGCGGAAGATCATACTCTTTTTCTTGGCCTGGTCATTCCGGGCTTTATCCTGATCT ATGTGTCAGGTTTTCTGATCCAGAAGCGTCATGCGAAAAAAATACAGGGTCAGCATTCCTGA
Upstream 100 bases:
>100_bases GGATCATTCTCGAAAAAAACAACGAACGAAAGCTGAAGGGGCAGGGGGCGATCTGATCTCCGTCCTGTTTTGCCGCTTGT CAGCATAGCTTGCGCCGATT
Downstream 100 bases:
>100_bases GCAGCGCATCGCAACTTTAACCGTGATTACAGGAATAGTTCAATCCTTATGAAGAATCTCTGGAACGAGTCCGATCTGAA CATGATGGAGGCTGGCCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MNYSFKTLWNAMFLAVGPVWFVLVWMIWSSGQLKTAEDHTLFLGLVIPGFILIYVSGFLIQKRHAKKIQGQHS
Sequences:
>Translated_73_residues MNYSFKTLWNAMFLAVGPVWFVLVWMIWSSGQLKTAEDHTLFLGLVIPGFILIYVSGFLIQKRHAKKIQGQHS >Mature_73_residues MNYSFKTLWNAMFLAVGPVWFVLVWMIWSSGQLKTAEDHTLFLGLVIPGFILIYVSGFLIQKRHAKKIQGQHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8411; Mature: 8411
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYSFKTLWNAMFLAVGPVWFVLVWMIWSSGQLKTAEDHTLFLGLVIPGFILIYVSGFLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QKRHAKKIQGQHS HHHHHHHCCCCCC >Mature Secondary Structure MNYSFKTLWNAMFLAVGPVWFVLVWMIWSSGQLKTAEDHTLFLGLVIPGFILIYVSGFLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QKRHAKKIQGQHS HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA