| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is ftn [H]
Identifier: 21674555
GI number: 21674555
Start: 1651285
End: 1651896
Strand: Reverse
Name: ftn [H]
Synonym: CT1740
Alternate gene names: 21674555
Gene position: 1651896-1651285 (Counterclockwise)
Preceding gene: 21674556
Following gene: 21674554
Centisome position: 76.66
GC content: 58.17
Gene sequence:
>612_bases ATGCTTAGTAAAACCATTCTCGATAAGCTCAACCATCAGGTTAACTTCGAAGCGGCTTCGGCGCATCTCTATCTGCAAAT GAGCGCGTGGCTCCTGACGCAGTCGCTCGACAGCACAGCGGCTTTTTTCCGCGCTCACGCCGAGGAGGAGAAGGCGCACA TGATGAAACTGTTCGATTACATCAACGAAACCGGCTCGCTGGCGCTGATCGGCGAGGTCGCCACTCCAGCGCCGGAGTGG AAGTCGCACATCGAGCTGCTCGAAGCGGCGTATAACCACGAACTGGCGATCACCCAGAGCATCAACGATCTGGTCGATAC AGCCTTGCGGGAGAAGGACTACTCGACCTTCCAGTTCCTCCAGTGGTACGTGGCCGAGCAGCACGAGGAGGAGTACCTGT TCAGCTCGATGCTGCACAAGGCGCGAATCATCAACACGATGGATGGGCGGGCGCTGTTCCGCTTCGACGAGGAGGTACGC AAGTCGGTGCTTCACCATGAGCATCACCAGCAGAAGCCGATGTTCCTGCAGGTGGGCCCCGCGCCAAAGCACCACGATGG CCACGATGGCCTCCATGCTCATCAGCATTCGTCACACTGGTCCGGGCATTGA
Upstream 100 bases:
>100_bases TATCTATACAATTTCTAAATAAGATGAGGAGGTGATCGCTGTCTCTAGCTTCTCTTTTTCTCGTAACTCCATATTCAGTT AATACCAAACAATTCATTCC
Downstream 100 bases:
>100_bases AACGTCAGCCTGTCGGACGCCCCCGGATCAACAGTGATCGGGGGCGTTTTCCGGATGCCGGAGTATCGAAGTTCGAGTAT AACATCAATCAGGAGAAGCA
Product: ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLSKTILDKLNHQVNFEAASAHLYLQMSAWLLTQSLDSTAAFFRAHAEEEKAHMMKLFDYINETGSLALIGEVATPAPEW KSHIELLEAAYNHELAITQSINDLVDTALREKDYSTFQFLQWYVAEQHEEEYLFSSMLHKARIINTMDGRALFRFDEEVR KSVLHHEHHQQKPMFLQVGPAPKHHDGHDGLHAHQHSSHWSGH
Sequences:
>Translated_203_residues MLSKTILDKLNHQVNFEAASAHLYLQMSAWLLTQSLDSTAAFFRAHAEEEKAHMMKLFDYINETGSLALIGEVATPAPEW KSHIELLEAAYNHELAITQSINDLVDTALREKDYSTFQFLQWYVAEQHEEEYLFSSMLHKARIINTMDGRALFRFDEEVR KSVLHHEHHQQKPMFLQVGPAPKHHDGHDGLHAHQHSSHWSGH >Mature_203_residues MLSKTILDKLNHQVNFEAASAHLYLQMSAWLLTQSLDSTAAFFRAHAEEEKAHMMKLFDYINETGSLALIGEVATPAPEW KSHIELLEAAYNHELAITQSINDLVDTALREKDYSTFQFLQWYVAEQHEEEYLFSSMLHKARIINTMDGRALFRFDEEVR KSVLHHEHHQQKPMFLQVGPAPKHHDGHDGLHAHQHSSHWSGH
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=159, Percent_Identity=46.5408805031447, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI1788212, Length=168, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 23459; Mature: 23459
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKTILDKLNHQVNFEAASAHLYLQMSAWLLTQSLDSTAAFFRAHAEEEKAHMMKLFDY CCHHHHHHHHCCCCCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INETGSLALIGEVATPAPEWKSHIELLEAAYNHELAITQSINDLVDTALREKDYSTFQFL HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCHHHHHH QWYVAEQHEEEYLFSSMLHKARIINTMDGRALFRFDEEVRKSVLHHEHHQQKPMFLQVGP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECC APKHHDGHDGLHAHQHSSHWSGH CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLSKTILDKLNHQVNFEAASAHLYLQMSAWLLTQSLDSTAAFFRAHAEEEKAHMMKLFDY CCHHHHHHHHCCCCCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INETGSLALIGEVATPAPEWKSHIELLEAAYNHELAITQSINDLVDTALREKDYSTFQFL HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCHHHHHH QWYVAEQHEEEYLFSSMLHKARIINTMDGRALFRFDEEVRKSVLHHEHHQQKPMFLQVGP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECC APKHHDGHDGLHAHQHSSHWSGH CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]