Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is ynbE [H]

Identifier: 21674539

GI number: 21674539

Start: 1633781

End: 1634086

Strand: Reverse

Name: ynbE [H]

Synonym: CT1723

Alternate gene names: 21674539

Gene position: 1634086-1633781 (Counterclockwise)

Preceding gene: 21674540

Following gene: 21674538

Centisome position: 75.83

GC content: 51.31

Gene sequence:

>306_bases
TTGCTATATTTCGGGAAAAATCGCCGACACAGGCACTGGGCTTCGGCTTGCCGATGCATCGGAATTGAAATGAACCCCAT
ACAAACCCGAAACCACATGAACAGACCAACTGCTCGCACCTTGTCTGCAGCAATGATTTTGCTTTCAGCAGGCCTTGTCA
TCGGCGGTTGCAGCCCCACGGTGAAGGTGGAGGCGCCGGACAAGCCGATCACGATCAACATGAACATCAAGATCGACCAC
GAAATCAGGATCAGGGTCGATCGCGACATCGACAACGCTATCGGTAAAAGAACGGACATTTTCTAA

Upstream 100 bases:

>100_bases
GCGTCGAGTGATCTCTCCCGTCTGCCGAAACGCCACTTCCCTCTCCGTGGCGATTTAACCAGCCCGATTTCCGCGGGAAA
ACAGGAAAAAACAAAGGGGC

Downstream 100 bases:

>100_bases
TCAGGGAGGATCACCATGCACATGATAACAACATATCGTCTCGCGACGCTGGCCAAAACCTTCGTCCTCTTCTTCACCAT
TCTTGCGGCATCGGCGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MLYFGKNRRHRHWASACRCIGIEMNPIQTRNHMNRPTARTLSAAMILLSAGLVIGGCSPTVKVEAPDKPITINMNIKIDH
EIRIRVDRDIDNAIGKRTDIF

Sequences:

>Translated_101_residues
MLYFGKNRRHRHWASACRCIGIEMNPIQTRNHMNRPTARTLSAAMILLSAGLVIGGCSPTVKVEAPDKPITINMNIKIDH
EIRIRVDRDIDNAIGKRTDIF
>Mature_101_residues
MLYFGKNRRHRHWASACRCIGIEMNPIQTRNHMNRPTARTLSAAMILLSAGLVIGGCSPTVKVEAPDKPITINMNIKIDH
EIRIRVDRDIDNAIGKRTDIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787647, Length=54, Percent_Identity=46.2962962962963, Blast_Score=66, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11438; Mature: 11438

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYFGKNRRHRHWASACRCIGIEMNPIQTRNHMNRPTARTLSAAMILLSAGLVIGGCSPT
CEEECCCCCCHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCE
VKVEAPDKPITINMNIKIDHEIRIRVDRDIDNAIGKRTDIF
EEEECCCCCEEEEEEEEECCEEEEEECCCCHHHCCCCCCCC
>Mature Secondary Structure
MLYFGKNRRHRHWASACRCIGIEMNPIQTRNHMNRPTARTLSAAMILLSAGLVIGGCSPT
CEEECCCCCCHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCE
VKVEAPDKPITINMNIKIDHEIRIRVDRDIDNAIGKRTDIF
EEEECCCCCEEEEEEEEECCEEEEEECCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]