| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674438
Identifier: 21674438
GI number: 21674438
Start: 1524671
End: 1525258
Strand: Reverse
Name: 21674438
Synonym: CT1620
Alternate gene names: NA
Gene position: 1525258-1524671 (Counterclockwise)
Preceding gene: 21674439
Following gene: 21674437
Centisome position: 70.78
GC content: 51.36
Gene sequence:
>588_bases GTGCATTATGAGCCGCAGAAGCTCATGGGCATGGGAACGACTACCGAAACGCTCTATTTTGACGATTATGGCAGAAAAGA GGCTGTGGAAAGGGTTACGGAATCGAATGTCATGGGAATCAAGACGTATGAGCATACCATGCAGGTCACTGATGGTCATA CCGGTATTTCCTACGAAATCAAGAAAACCGTCAACGGCAAGGATGAAACCAGCAAGGTGACGACAAAGAGCGACCTCCGG GAGTTTCAGGAGATGGCGCAGGCGATGGCCAAATCCCTGGATGTCAATGAGCTGAAGAAAAACATGGATTACCGCGAGGA GGGGACGGAGACGATTGCGGGAGTTACTGGCAAGAAGTACTCGGTTGCCATGAGCAAGGAGCAGTCCGATGCACGTGTTT ATGGCGTGATGTACAAGAATATCGTTTTGAAAAGTGAAATGGGCAGCATCTCCACGAAAGCGGCAAGCATCGAGGAAAAC GTCGTCGGTTCGGCGTCGAAATTCGCGATTCCGGCGCGCCACACCGTTCAGGAGGTCAATGTTGCCGAGGAGATGGAGAA AGCCGCAAATGGTGGGTCAGGAGAGTAA
Upstream 100 bases:
>100_bases GATTTCCGGCTGTTCAAAATCGGATAACCCGGTATCCGAGGCGGTCTCTTCACTTTCAGGCGAATAGCTCCCGAAGTGTT ATGAAATCAAATCGGGCATT
Downstream 100 bases:
>100_bases CGTCACCATGCAAGTCCATAGCCGGTAACGCGATGGCCGGTTTTTGCATTACAGCGAAAGGAAAAAAGGCGGTGCTTGTG CCGCCTTTTTTATGATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MHYEPQKLMGMGTTTETLYFDDYGRKEAVERVTESNVMGIKTYEHTMQVTDGHTGISYEIKKTVNGKDETSKVTTKSDLR EFQEMAQAMAKSLDVNELKKNMDYREEGTETIAGVTGKKYSVAMSKEQSDARVYGVMYKNIVLKSEMGSISTKAASIEEN VVGSASKFAIPARHTVQEVNVAEEMEKAANGGSGE
Sequences:
>Translated_195_residues MHYEPQKLMGMGTTTETLYFDDYGRKEAVERVTESNVMGIKTYEHTMQVTDGHTGISYEIKKTVNGKDETSKVTTKSDLR EFQEMAQAMAKSLDVNELKKNMDYREEGTETIAGVTGKKYSVAMSKEQSDARVYGVMYKNIVLKSEMGSISTKAASIEEN VVGSASKFAIPARHTVQEVNVAEEMEKAANGGSGE >Mature_195_residues MHYEPQKLMGMGTTTETLYFDDYGRKEAVERVTESNVMGIKTYEHTMQVTDGHTGISYEIKKTVNGKDETSKVTTKSDLR EFQEMAQAMAKSLDVNELKKNMDYREEGTETIAGVTGKKYSVAMSKEQSDARVYGVMYKNIVLKSEMGSISTKAASIEEN VVGSASKFAIPARHTVQEVNVAEEMEKAANGGSGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21564; Mature: 21564
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYEPQKLMGMGTTTETLYFDDYGRKEAVERVTESNVMGIKTYEHTMQVTDGHTGISYEI CCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEHHHEEEEECCCCCCEEEE KKTVNGKDETSKVTTKSDLREFQEMAQAMAKSLDVNELKKNMDYREEGTETIAGVTGKKY EECCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCHHHHCCCCCEE SVAMSKEQSDARVYGVMYKNIVLKSEMGSISTKAASIEENVVGSASKFAIPARHTVQEVN EEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHEECCCHHHHHHHH VAEEMEKAANGGSGE HHHHHHHHCCCCCCC >Mature Secondary Structure MHYEPQKLMGMGTTTETLYFDDYGRKEAVERVTESNVMGIKTYEHTMQVTDGHTGISYEI CCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEHHHEEEEECCCCCCEEEE KKTVNGKDETSKVTTKSDLREFQEMAQAMAKSLDVNELKKNMDYREEGTETIAGVTGKKY EECCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCHHHHCCCCCEE SVAMSKEQSDARVYGVMYKNIVLKSEMGSISTKAASIEENVVGSASKFAIPARHTVQEVN EEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHEECCCHHHHHHHH VAEEMEKAANGGSGE HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA