| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674401
Identifier: 21674401
GI number: 21674401
Start: 1491158
End: 1491961
Strand: Reverse
Name: 21674401
Synonym: CT1583
Alternate gene names: NA
Gene position: 1491961-1491158 (Counterclockwise)
Preceding gene: 21674402
Following gene: 21674399
Centisome position: 69.23
GC content: 60.57
Gene sequence:
>804_bases GTGTCGTCAAAGTTACAATCGGTGCATCATGAGGCGGCCAGAAAGGCGCAGCGGTGGACTTTCCGCGAACAGTTCCTCGA TACCGACCGGCTGAGGCAGATCAATTACGGCAATCTCGCCCTGCGGCGCGAGGCTCATCTGTTTCTGACTCACGGCGTGG TCGTGGCTGTGTTGCTTCTGTCGATTTTCTGGCTTGTCAGCGCGAACTGGAATCGCGTGATGGGCATGTTCGGCGGCGGG CACAACCAGCAGGCGGCGGTTCAGTGCTACGAGGTTGTCACCAACGTGACGCAGTTGCCGCCACCTCCGTCCATTGCGCC GGAGCCGTCGAAGGTGAAGGCCGCCGCCGCGCCAGTGGAAGCGCCGAAGGTGGGCAAGATCAGGAAGGTGGCTGAAGCGC CGCCGGATCAGACTTTCGCGACGCAGAAGGAGATCAAACAGGCGATCACGCAAGGCCCGGCTTCACAGGATGGCGGCGGT TCGTCAGGCTCTTGTGACACGGTCGTGGAATTTGTCAACTGCCAGAATCCGCCGACGGTGGTCAGCACGCCGAGGCTGGT CTATCCCGAAATGGCGAGGATCGCCGGTTTGGAAGGCAGGGTTTTCGTGCGCGTGCTCATCAGCGAAGAGGGCCGCCCGA TGAAAGCCGAGATTGTCAAACGCATTCCTGCCGACCAGACAGTGTTCGACAAGGAGGCGGTGCGCATTGCTATGGAGACG AAGTACACGGCGGGAGTGCAGAACGGCAGGAAGGTGCGGGTCTGGATGACTATTCCGGTGCGCTTTACGCTGCATGAATC GTGA
Upstream 100 bases:
>100_bases CCTCGACGATTTTACCCCGAAGGACGAAGCTGAAATTCAGAAGGCCGTGACCATGCGCTGAAGACGCGGTTCGTGAACCA GAAAACAGGAGTACGGAAAG
Downstream 100 bases:
>100_bases AGCGAATGATGAATTGAAGAGTGGCGGTTTGATTTGTCGGGGTCGCCCTGATTTGTTTCAAAAGTTATTGATACTCCAAA GCCAACAGAAAGTCTCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Like
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSSKLQSVHHEAARKAQRWTFREQFLDTDRLRQINYGNLALRREAHLFLTHGVVVAVLLLSIFWLVSANWNRVMGMFGGG HNQQAAVQCYEVVTNVTQLPPPPSIAPEPSKVKAAAAPVEAPKVGKIRKVAEAPPDQTFATQKEIKQAITQGPASQDGGG SSGSCDTVVEFVNCQNPPTVVSTPRLVYPEMARIAGLEGRVFVRVLISEEGRPMKAEIVKRIPADQTVFDKEAVRIAMET KYTAGVQNGRKVRVWMTIPVRFTLHES
Sequences:
>Translated_267_residues MSSKLQSVHHEAARKAQRWTFREQFLDTDRLRQINYGNLALRREAHLFLTHGVVVAVLLLSIFWLVSANWNRVMGMFGGG HNQQAAVQCYEVVTNVTQLPPPPSIAPEPSKVKAAAAPVEAPKVGKIRKVAEAPPDQTFATQKEIKQAITQGPASQDGGG SSGSCDTVVEFVNCQNPPTVVSTPRLVYPEMARIAGLEGRVFVRVLISEEGRPMKAEIVKRIPADQTVFDKEAVRIAMET KYTAGVQNGRKVRVWMTIPVRFTLHES >Mature_266_residues SSKLQSVHHEAARKAQRWTFREQFLDTDRLRQINYGNLALRREAHLFLTHGVVVAVLLLSIFWLVSANWNRVMGMFGGGH NQQAAVQCYEVVTNVTQLPPPPSIAPEPSKVKAAAAPVEAPKVGKIRKVAEAPPDQTFATQKEIKQAITQGPASQDGGGS SGSCDTVVEFVNCQNPPTVVSTPRLVYPEMARIAGLEGRVFVRVLISEEGRPMKAEIVKRIPADQTVFDKEAVRIAMETK YTAGVQNGRKVRVWMTIPVRFTLHES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29493; Mature: 29362
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKLQSVHHEAARKAQRWTFREQFLDTDRLRQINYGNLALRREAHLFLTHGVVVAVLLL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEHHHEEHHHHHHHHHHHH SIFWLVSANWNRVMGMFGGGHNQQAAVQCYEVVTNVTQLPPPPSIAPEPSKVKAAAAPVE HHHHHHCCCHHHEEHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC APKVGKIRKVAEAPPDQTFATQKEIKQAITQGPASQDGGGSSGSCDTVVEFVNCQNPPTV CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC VSTPRLVYPEMARIAGLEGRVFVRVLISEEGRPMKAEIVKRIPADQTVFDKEAVRIAMET CCCCCHHCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHEEEEHH KYTAGVQNGRKVRVWMTIPVRFTLHES HHHHCCCCCCEEEEEEEEEEEEEEECC >Mature Secondary Structure SSKLQSVHHEAARKAQRWTFREQFLDTDRLRQINYGNLALRREAHLFLTHGVVVAVLLL CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEHHHEEHHHHHHHHHHHH SIFWLVSANWNRVMGMFGGGHNQQAAVQCYEVVTNVTQLPPPPSIAPEPSKVKAAAAPVE HHHHHHCCCHHHEEHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCC APKVGKIRKVAEAPPDQTFATQKEIKQAITQGPASQDGGGSSGSCDTVVEFVNCQNPPTV CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC VSTPRLVYPEMARIAGLEGRVFVRVLISEEGRPMKAEIVKRIPADQTVFDKEAVRIAMET CCCCCHHCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHEEEEHH KYTAGVQNGRKVRVWMTIPVRFTLHES HHHHCCCCCCEEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA