| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21674389
Identifier: 21674389
GI number: 21674389
Start: 1480140
End: 1481378
Strand: Direct
Name: 21674389
Synonym: CT1571
Alternate gene names: NA
Gene position: 1480140-1481378 (Clockwise)
Preceding gene: 21674388
Following gene: 21674394
Centisome position: 68.69
GC content: 51.17
Gene sequence:
>1239_bases TTGATAGCACCCATGCAAACCTGCCCAGTTTCCAATCTTCCGGTTACCTCAAAACACAACTGGAAATCAATCCCGGCCGG CGCCGATTATGTCAAACGCCTTGAGCTTATCGGTGACAACATTTTTCACCACTATGTCGAGTCGGATCATCCGGTAACGC TGAACTCCATGAGCACCGAACTGGTTCACGATGTGCTCGAAGAGAGTGGAATCAAGGACTCACCGCTCTACCTCCTGTGG GACATGAACAACATCAGTAACATATCATTCCAGTACAAGCAGGGCATTAACGACATCGTCTACCGCTCGGGTCTCGATTT TGCCGTAGTCGTTTTTTACAACATCGACGAGTCGTGCAGAATCATCATCGAAACCTTCGCTGCAATGGCGCCCAACACGA TGACCGTGCTGCTCAGGGAAGACTATCGCGATGCGATGACCACCCTCCTGGAGTACCGGTCAGGCAAAGCTCCCGAGAAG CTGGAGGATCAGGATGTCGATGAGGAAATCTCGATGAAAAATGAATTTCTCGCGACTATCGCCAGAATGTCGTGGCTCAA CATGCTCAACCAGAAAATATTCCTTCCACCCACCGATAGTCCCTTCTACCCCTACTTCAAGGCTATCGATCACATGCAAG AGGATCTGAAAGCTAAAGAAGAACTCCATGAAAAGGAGATGCGCCAGCTCAAGGCAGAAAACGAGCAAAAGCTGAGTCAG AAAATCATCCAGCTCAATGCCCAGATCGAGCTTGGCAAAAAGGAGATCCAGCGATTCGAGCAGGAAAAAAATGCCCTGAA ATCCAGAATCGCCGCTCAGGAGATGGAGCTGACAAGAATTTCCACTGCTATCGGCGAAAAGACCTCCTCCCTGCACCTGA TCTGCGACCAGATCAAGAGTCTCAACATCGAATCGGCGGCCAAGCAGAAAATTCTCGAGCAGTGCCACAGTATGATCGAG ACCGAACTGAACGAAAAACGCCTCAAAACCGAGCTCACCGCCGGCGACTCGGCGTTCCTCTCCAAGCTTCAGAAAAAGCA CCCAAACCTCAACCAGCGTGAACTCAGGGTAAGCCTGATGGTCAAGCTCAACTACGACACGCGGGAGATCGCGCGCTCAA TCGGCATTTCGACGAGAGGCATGGAGAGCATCCGCTACCGGATGCACCGAAAACTCGGTCTGGACAAGCACAAGTCGATC AAGACCTACCTGTCAGAACTCGCATCGGAAGTGAGCTGA
Upstream 100 bases:
>100_bases TATTGGGAATAATGGGAGAAAAAGTCGTATAATATGTGTAACACCTGCATCATAACCGTATGATTATACTTCATGACAGG TGCCTTTAATAACGTAATAG
Downstream 100 bases:
>100_bases CACCTGACAGACACCATACGAATCGAACCACCGGGGTGCAATGAACACCCCGGTTTGCTTTTACGCCATCCCACCCCAAT ACAATACTACGGCTATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MIAPMQTCPVSNLPVTSKHNWKSIPAGADYVKRLELIGDNIFHHYVESDHPVTLNSMSTELVHDVLEESGIKDSPLYLLW DMNNISNISFQYKQGINDIVYRSGLDFAVVVFYNIDESCRIIIETFAAMAPNTMTVLLREDYRDAMTTLLEYRSGKAPEK LEDQDVDEEISMKNEFLATIARMSWLNMLNQKIFLPPTDSPFYPYFKAIDHMQEDLKAKEELHEKEMRQLKAENEQKLSQ KIIQLNAQIELGKKEIQRFEQEKNALKSRIAAQEMELTRISTAIGEKTSSLHLICDQIKSLNIESAAKQKILEQCHSMIE TELNEKRLKTELTAGDSAFLSKLQKKHPNLNQRELRVSLMVKLNYDTREIARSIGISTRGMESIRYRMHRKLGLDKHKSI KTYLSELASEVS
Sequences:
>Translated_412_residues MIAPMQTCPVSNLPVTSKHNWKSIPAGADYVKRLELIGDNIFHHYVESDHPVTLNSMSTELVHDVLEESGIKDSPLYLLW DMNNISNISFQYKQGINDIVYRSGLDFAVVVFYNIDESCRIIIETFAAMAPNTMTVLLREDYRDAMTTLLEYRSGKAPEK LEDQDVDEEISMKNEFLATIARMSWLNMLNQKIFLPPTDSPFYPYFKAIDHMQEDLKAKEELHEKEMRQLKAENEQKLSQ KIIQLNAQIELGKKEIQRFEQEKNALKSRIAAQEMELTRISTAIGEKTSSLHLICDQIKSLNIESAAKQKILEQCHSMIE TELNEKRLKTELTAGDSAFLSKLQKKHPNLNQRELRVSLMVKLNYDTREIARSIGISTRGMESIRYRMHRKLGLDKHKSI KTYLSELASEVS >Mature_412_residues MIAPMQTCPVSNLPVTSKHNWKSIPAGADYVKRLELIGDNIFHHYVESDHPVTLNSMSTELVHDVLEESGIKDSPLYLLW DMNNISNISFQYKQGINDIVYRSGLDFAVVVFYNIDESCRIIIETFAAMAPNTMTVLLREDYRDAMTTLLEYRSGKAPEK LEDQDVDEEISMKNEFLATIARMSWLNMLNQKIFLPPTDSPFYPYFKAIDHMQEDLKAKEELHEKEMRQLKAENEQKLSQ KIIQLNAQIELGKKEIQRFEQEKNALKSRIAAQEMELTRISTAIGEKTSSLHLICDQIKSLNIESAAKQKILEQCHSMIE TELNEKRLKTELTAGDSAFLSKLQKKHPNLNQRELRVSLMVKLNYDTREIARSIGISTRGMESIRYRMHRKLGLDKHKSI KTYLSELASEVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47490; Mature: 47490
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPMQTCPVSNLPVTSKHNWKSIPAGADYVKRLELIGDNIFHHYVESDHPVTLNSMSTE CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH LVHDVLEESGIKDSPLYLLWDMNNISNISFQYKQGINDIVYRSGLDFAVVVFYNIDESCR HHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHCCHHHHHHCCCCEEEEEEEECCHHHH IIIETFAAMAPNTMTVLLREDYRDAMTTLLEYRSGKAPEKLEDQDVDEEISMKNEFLATI HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH ARMSWLNMLNQKIFLPPTDSPFYPYFKAIDHMQEDLKAKEELHEKEMRQLKAENEQKLSQ HHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIIQLNAQIELGKKEIQRFEQEKNALKSRIAAQEMELTRISTAIGEKTSSLHLICDQIKS HHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LNIESAAKQKILEQCHSMIETELNEKRLKTELTAGDSAFLSKLQKKHPNLNQRELRVSLM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHEEEEEE VKLNYDTREIARSIGISTRGMESIRYRMHRKLGLDKHKSIKTYLSELASEVS EEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIAPMQTCPVSNLPVTSKHNWKSIPAGADYVKRLELIGDNIFHHYVESDHPVTLNSMSTE CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH LVHDVLEESGIKDSPLYLLWDMNNISNISFQYKQGINDIVYRSGLDFAVVVFYNIDESCR HHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHCCHHHHHHCCCCEEEEEEEECCHHHH IIIETFAAMAPNTMTVLLREDYRDAMTTLLEYRSGKAPEKLEDQDVDEEISMKNEFLATI HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH ARMSWLNMLNQKIFLPPTDSPFYPYFKAIDHMQEDLKAKEELHEKEMRQLKAENEQKLSQ HHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIIQLNAQIELGKKEIQRFEQEKNALKSRIAAQEMELTRISTAIGEKTSSLHLICDQIKS HHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LNIESAAKQKILEQCHSMIETELNEKRLKTELTAGDSAFLSKLQKKHPNLNQRELRVSLM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHEEEEEE VKLNYDTREIARSIGISTRGMESIRYRMHRKLGLDKHKSIKTYLSELASEVS EEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA