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The map label for this gene is 21674286

Identifier: 21674286

GI number: 21674286

Start: 1374692

End: 1375639

Strand: Direct

Name: 21674286

Synonym: CT1466

Alternate gene names: NA

Gene position: 1374692-1375639 (Clockwise)

Preceding gene: 21674285

Following gene: 21674287

Centisome position: 63.79

GC content: 45.78

Gene sequence:

>948_bases
ATGTCCCCCAAAGTTTTTGTAAGCCACGCCAGCGAAGATAAAGATCGATTTGTACTTCAGTTCGCAGAGCGCCTTCGTCA
AAAAGGTATCGATGCTTGGCTGGACAAGTGGGAAATGCTCCCGGGAGATAGCCTTGTAGACAAGATATTCGAAGAGGGAA
TAAAGGAGGCCAAAGCAGTAATCGTCGTTTTATCAAAGTTCAGCGTGGAAAAGCCGTGGGTAAGAGAAGAACTAAACGCC
GCCTTTGTTAAAAGGATCAACAACGGGAGCAAACTCATTCCAATCGTTATCGACGATTGCGAAGTCCCAGAAGCGTTGAA
AAGCACGTTATGGGAACCCATCGCTGATCTGTCGGCTTATGACAAAAGCTTCGATCGTATTGTTGCCTCGATCTATGGTG
CCAATGACAGACCACCTATAGGGCCGCAGCCCGAGTACGTCCAGTCATTTGTTCAAGCCATCGGCAACCTAAACAACATC
GATAGTCTTGTGCTCCGTTTTTCCTGCGAGGAAGTATTGAAGACTGGGAATGCTTTCGTTAATCCTGAGCGCGTCTTCTT
AAAAGATGACAAACCGATCCTTCCGGAGGACGAGCTGAAAGATTCCTTAGAAATACTTGATGGTGGCGGCTATATCAAAC
TGATGCGAACCCTCGGCGGTGGCTTTTTCCCATACCAGATAACCACCTATGGCTTTGATGTTTATGCAAATGCTTCTATT
CCCGATTATCAGGGCAAGATTGCGGCGGTAGTCTCTGCCATAGTGAATGAGAAGTTGATGAGTAATGCCAAAATTCAAGA
GCGACTAAAGGAGAACAAAATCATCGTTGATCACATCTTAAACGTGCTTGAAAACAAGGGCCACATAAAGCAATCAAAAA
TGATTGGCGGGTTGTCGGAAATATTTAATGTTTCGCCTTCATTGAAGCGAGCACTAAGCGGTGGCTAG

Upstream 100 bases:

>100_bases
GCTTTTAAGGGATTTCGTTACAGAGCGTTGTTGATGAGCGTCACATGAAACGAGATATGAAGAAACGAACTAATAACTTG
TTAGAAACCAGAGGCACTCT

Downstream 100 bases:

>100_bases
TGTCACGTCACCACAAAACTGTCTCATCAAAAATTACAAAAACTGATTAATCTCTTTATTTTTATAGGCTTATGAGCAGG
CCCGCATCCTCTCTCCGCAA

Product: TIR domain-containing protein

Products: NA

Alternate protein names: SEFIR Domain Protein; TPR Repeat-Containing Protein; Tir Protein; Ll-Interleukin Receptor; TIR Domain-Containing Protein

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSPKVFVSHASEDKDRFVLQFAERLRQKGIDAWLDKWEMLPGDSLVDKIFEEGIKEAKAVIVVLSKFSVEKPWVREELNA
AFVKRINNGSKLIPIVIDDCEVPEALKSTLWEPIADLSAYDKSFDRIVASIYGANDRPPIGPQPEYVQSFVQAIGNLNNI
DSLVLRFSCEEVLKTGNAFVNPERVFLKDDKPILPEDELKDSLEILDGGGYIKLMRTLGGGFFPYQITTYGFDVYANASI
PDYQGKIAAVVSAIVNEKLMSNAKIQERLKENKIIVDHILNVLENKGHIKQSKMIGGLSEIFNVSPSLKRALSGG

Sequences:

>Translated_315_residues
MSPKVFVSHASEDKDRFVLQFAERLRQKGIDAWLDKWEMLPGDSLVDKIFEEGIKEAKAVIVVLSKFSVEKPWVREELNA
AFVKRINNGSKLIPIVIDDCEVPEALKSTLWEPIADLSAYDKSFDRIVASIYGANDRPPIGPQPEYVQSFVQAIGNLNNI
DSLVLRFSCEEVLKTGNAFVNPERVFLKDDKPILPEDELKDSLEILDGGGYIKLMRTLGGGFFPYQITTYGFDVYANASI
PDYQGKIAAVVSAIVNEKLMSNAKIQERLKENKIIVDHILNVLENKGHIKQSKMIGGLSEIFNVSPSLKRALSGG
>Mature_314_residues
SPKVFVSHASEDKDRFVLQFAERLRQKGIDAWLDKWEMLPGDSLVDKIFEEGIKEAKAVIVVLSKFSVEKPWVREELNAA
FVKRINNGSKLIPIVIDDCEVPEALKSTLWEPIADLSAYDKSFDRIVASIYGANDRPPIGPQPEYVQSFVQAIGNLNNID
SLVLRFSCEEVLKTGNAFVNPERVFLKDDKPILPEDELKDSLEILDGGGYIKLMRTLGGGFFPYQITTYGFDVYANASIP
DYQGKIAAVVSAIVNEKLMSNAKIQERLKENKIIVDHILNVLENKGHIKQSKMIGGLSEIFNVSPSLKRALSGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35160; Mature: 35029

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50104 TIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPKVFVSHASEDKDRFVLQFAERLRQKGIDAWLDKWEMLPGDSLVDKIFEEGIKEAKAV
CCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IVVLSKFSVEKPWVREELNAAFVKRINNGSKLIPIVIDDCEVPEALKSTLWEPIADLSAY
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
DKSFDRIVASIYGANDRPPIGPQPEYVQSFVQAIGNLNNIDSLVLRFSCEEVLKTGNAFV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
NPERVFLKDDKPILPEDELKDSLEILDGGGYIKLMRTLGGGFFPYQITTYGFDVYANASI
CCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECEEEEECCCC
PDYQGKIAAVVSAIVNEKLMSNAKIQERLKENKIIVDHILNVLENKGHIKQSKMIGGLSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
IFNVSPSLKRALSGG
HHCCCHHHHHHHCCC
>Mature Secondary Structure 
SPKVFVSHASEDKDRFVLQFAERLRQKGIDAWLDKWEMLPGDSLVDKIFEEGIKEAKAV
CCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IVVLSKFSVEKPWVREELNAAFVKRINNGSKLIPIVIDDCEVPEALKSTLWEPIADLSAY
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
DKSFDRIVASIYGANDRPPIGPQPEYVQSFVQAIGNLNNIDSLVLRFSCEEVLKTGNAFV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
NPERVFLKDDKPILPEDELKDSLEILDGGGYIKLMRTLGGGFFPYQITTYGFDVYANASI
CCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECEEEEECCCC
PDYQGKIAAVVSAIVNEKLMSNAKIQERLKENKIIVDHILNVLENKGHIKQSKMIGGLSE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
IFNVSPSLKRALSGG
HHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA