| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is eriC [C]
Identifier: 21674213
GI number: 21674213
Start: 1303909
End: 1305798
Strand: Direct
Name: eriC [C]
Synonym: CT1391
Alternate gene names: 21674213
Gene position: 1303909-1305798 (Clockwise)
Preceding gene: 21674212
Following gene: 21674216
Centisome position: 60.51
GC content: 54.87
Gene sequence:
>1890_bases ATGAGCTGGCTTTTTAAGAACAGCCGCATCAAGCGGCGTGTTATTGTCTTGACCTATCTGATCCTTCGCAAAAGCCGTTA TTTCAAAGGTTCTTCACAGCAGTTCGTCCGCATGACCTGGGCTTCGTTCCTCGCCCAGCTCAACCTCAATCAGGATCTTC CGTTTCTTCTCGTTGCCGTTTTCGTTGGACTGGTCACGGGCTACGTCGCCGTTATTTTTCACGACGCCATCAAGATCATC AGCTCATACCTTTTCTACGGCACAACCGCGCTCGGGTTGCCGACTTTCAACAATTATCTCAGAATTTTTCTGCTTCCGCT CATTCCTGCTCTGGGCGGCCTGATTGTCGGGCTGTATAATGCTTTTGTCGTCAAGGCGAGGCCGGAGCACGGCTTACCTT CGGTCATCAAGGCGGTCGCACAGAAAAATGGCAAAATTCCCACGAAAAACTGGATACACAAAACCATCACCTCGGTGGTC AGCATCGGAACCGGGGGCGGCGGCGGACGCGAGGCGCCGATCGCGCAGGTAGGCGCATCGATCGGTTCAACCGTGGCGCA GTGGCTCAAGTTTTCGCCGGGCAGAACCCGGACACTCCTCGGTTGTGGCGCGGCAGCGGGTCTTGCCGCCGTGTTCAACG CGCCCATCGGTGGCGTGATGTTCGCCGTGGAGGTGATTCTCGGCGATTTCAGCGTCAAGACATTCAGCCCTATCGTGGTG GCTGCCGTGGTGGGAACCGTACTTTCGAGAAGCTATCTCGGCAATTACCCGACTTTTCAGGTTCCCGAATACAGTCTCGT TTCAAATACCGAACTGGTGTTCTACTTCATTCTCGGCGTCCTTGCCGGTCTCACCGCAGTCCTGTTCATCAGAACCTTTT ACTTCATTGAAGAGCATATTCAGAAAATTGAAAAGCGCTTTCGCATTCCCGCGTGGTTGATGCCCGCTATCGGTGGCCTT TTGTGCGGTTTGATCAGTATGTGGGTGCCGGAACTGTACGGTTTCAGCTATGAGGTTATCAACAAGGCACTGATCGGGCA GGAGAGCTGGGAGAACATGGTTGCCGTCTACCTGCTCAAGCCGGTGGTCGTGGCGCTGACGGTCGGCTCTGGCGGTTCGG GCGGCATGTTCGCACCGACCATGAAGATGGGCGCGATGCTCGGCGGCATGTTCGGCAAGGTCGTGAACAATCTCTTTCCG GCAATCACCGCCGCATCAGGGGCTTACGCGCTGGTTGGCATGGGCGCCGTGACCGCCGGAATCATGCGCGCACCGTTGAC TGTTATCCTCATTTTGTTTGAAGTCACCGGTCAGTACGAGATCGTCTTGCCCATCATGTTTGCGGCGGTTACTTCGGCGC TGGTGGCACGGCTGGCTTATCCCTACACCATGGAAACCTACGTGCTCGAAAAGGAGAATGTGCGTGTCGGCTTCGGCATT GCACTGACCATTGCCGGAAATATCAGCGTGCTGGAGGTGATGCAGCGCAAATTCGTCAAGTTCTTCGATGTCACCAAGGT GGAGAACATCATCGATGCGTTCTACAACACCCGCGATTCGCACTTTTTCATCACGACGCCAGAGGGAACGTTCGTCGGCA TCATCGGCCTCGACGAGATGAGCCTCGTGCTGAAGGATGGTATCTTCCCCGGCATGATCGCTGATGATCTGGTCAAAAAG AATGTGACCGTCTTGTACGACACCTCCAAGCTCGACGAGGCGCTGAAGATTTTCGAGATTTCCGAATACTCGACACTGCC GGTGGTCGAATATCATTCACGCAAGCTGCTCGGGATTCTCAAGCAGGACGAGGCGTTTTCCTATTACCGCAAACAGATGA ACCTCATCGGTGAAGATGCCGGTGAGCTGGCCGACCAGCGAACAGCGTAA
Upstream 100 bases:
>100_bases CCATCGAAAGCCTTGCGAAATCAGCGTTTGTTTGGTATCCACATACAGAAAAAATACATTGCAAGTATTGCCATGATTAC CAATCCACTGACCCGATTCA
Downstream 100 bases:
>100_bases TGGCCGTCCGTGACGATTCATTTGTCACAAGAATCAAAAGCCGCTTGCATTAACGGCAACTGATGCGTATGGTTTTGTGA TGTGCTCCCTGAATCGCTTG
Product: chloride channel, putative
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MSWLFKNSRIKRRVIVLTYLILRKSRYFKGSSQQFVRMTWASFLAQLNLNQDLPFLLVAVFVGLVTGYVAVIFHDAIKII SSYLFYGTTALGLPTFNNYLRIFLLPLIPALGGLIVGLYNAFVVKARPEHGLPSVIKAVAQKNGKIPTKNWIHKTITSVV SIGTGGGGGREAPIAQVGASIGSTVAQWLKFSPGRTRTLLGCGAAAGLAAVFNAPIGGVMFAVEVILGDFSVKTFSPIVV AAVVGTVLSRSYLGNYPTFQVPEYSLVSNTELVFYFILGVLAGLTAVLFIRTFYFIEEHIQKIEKRFRIPAWLMPAIGGL LCGLISMWVPELYGFSYEVINKALIGQESWENMVAVYLLKPVVVALTVGSGGSGGMFAPTMKMGAMLGGMFGKVVNNLFP AITAASGAYALVGMGAVTAGIMRAPLTVILILFEVTGQYEIVLPIMFAAVTSALVARLAYPYTMETYVLEKENVRVGFGI ALTIAGNISVLEVMQRKFVKFFDVTKVENIIDAFYNTRDSHFFITTPEGTFVGIIGLDEMSLVLKDGIFPGMIADDLVKK NVTVLYDTSKLDEALKIFEISEYSTLPVVEYHSRKLLGILKQDEAFSYYRKQMNLIGEDAGELADQRTA
Sequences:
>Translated_629_residues MSWLFKNSRIKRRVIVLTYLILRKSRYFKGSSQQFVRMTWASFLAQLNLNQDLPFLLVAVFVGLVTGYVAVIFHDAIKII SSYLFYGTTALGLPTFNNYLRIFLLPLIPALGGLIVGLYNAFVVKARPEHGLPSVIKAVAQKNGKIPTKNWIHKTITSVV SIGTGGGGGREAPIAQVGASIGSTVAQWLKFSPGRTRTLLGCGAAAGLAAVFNAPIGGVMFAVEVILGDFSVKTFSPIVV AAVVGTVLSRSYLGNYPTFQVPEYSLVSNTELVFYFILGVLAGLTAVLFIRTFYFIEEHIQKIEKRFRIPAWLMPAIGGL LCGLISMWVPELYGFSYEVINKALIGQESWENMVAVYLLKPVVVALTVGSGGSGGMFAPTMKMGAMLGGMFGKVVNNLFP AITAASGAYALVGMGAVTAGIMRAPLTVILILFEVTGQYEIVLPIMFAAVTSALVARLAYPYTMETYVLEKENVRVGFGI ALTIAGNISVLEVMQRKFVKFFDVTKVENIIDAFYNTRDSHFFITTPEGTFVGIIGLDEMSLVLKDGIFPGMIADDLVKK NVTVLYDTSKLDEALKIFEISEYSTLPVVEYHSRKLLGILKQDEAFSYYRKQMNLIGEDAGELADQRTA >Mature_628_residues SWLFKNSRIKRRVIVLTYLILRKSRYFKGSSQQFVRMTWASFLAQLNLNQDLPFLLVAVFVGLVTGYVAVIFHDAIKIIS SYLFYGTTALGLPTFNNYLRIFLLPLIPALGGLIVGLYNAFVVKARPEHGLPSVIKAVAQKNGKIPTKNWIHKTITSVVS IGTGGGGGREAPIAQVGASIGSTVAQWLKFSPGRTRTLLGCGAAAGLAAVFNAPIGGVMFAVEVILGDFSVKTFSPIVVA AVVGTVLSRSYLGNYPTFQVPEYSLVSNTELVFYFILGVLAGLTAVLFIRTFYFIEEHIQKIEKRFRIPAWLMPAIGGLL CGLISMWVPELYGFSYEVINKALIGQESWENMVAVYLLKPVVVALTVGSGGSGGMFAPTMKMGAMLGGMFGKVVNNLFPA ITAASGAYALVGMGAVTAGIMRAPLTVILILFEVTGQYEIVLPIMFAAVTSALVARLAYPYTMETYVLEKENVRVGFGIA LTIAGNISVLEVMQRKFVKFFDVTKVENIIDAFYNTRDSHFFITTPEGTFVGIIGLDEMSLVLKDGIFPGMIADDLVKKN VTVLYDTSKLDEALKIFEISEYSTLPVVEYHSRKLLGILKQDEAFSYYRKQMNLIGEDAGELADQRTA
Specific function: Selective chloride channel [C]
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557473, Length=360, Percent_Identity=28.6111111111111, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI189217923, Length=360, Percent_Identity=28.6111111111111, Blast_Score=94, Evalue=5e-19, Organism=Homo sapiens, GI189217921, Length=360, Percent_Identity=28.6111111111111, Blast_Score=94, Evalue=5e-19, Organism=Homo sapiens, GI153252026, Length=361, Percent_Identity=28.808864265928, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI1786350, Length=417, Percent_Identity=29.4964028776978, Blast_Score=123, Evalue=4e-29, Organism=Escherichia coli, GI87081943, Length=343, Percent_Identity=27.6967930029155, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71996452, Length=511, Percent_Identity=24.26614481409, Blast_Score=86, Evalue=9e-17, Organism=Caenorhabditis elegans, GI71996455, Length=511, Percent_Identity=24.26614481409, Blast_Score=85, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 68702; Mature: 68571
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLFKNSRIKRRVIVLTYLILRKSRYFKGSSQQFVRMTWASFLAQLNLNQDLPFLLVAV CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FVGLVTGYVAVIFHDAIKIISSYLFYGTTALGLPTFNNYLRIFLLPLIPALGGLIVGLYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AFVVKARPEHGLPSVIKAVAQKNGKIPTKNWIHKTITSVVSIGTGGGGGREAPIAQVGAS HHEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IGSTVAQWLKFSPGRTRTLLGCGAAAGLAAVFNAPIGGVMFAVEVILGDFSVKTFSPIVV HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHH AAVVGTVLSRSYLGNYPTFQVPEYSLVSNTELVFYFILGVLAGLTAVLFIRTFYFIEEHI HHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKIEKRFRIPAWLMPAIGGLLCGLISMWVPELYGFSYEVINKALIGQESWENMVAVYLLK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHH PVVVALTVGSGGSGGMFAPTMKMGAMLGGMFGKVVNNLFPAITAASGAYALVGMGAVTAG HHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IMRAPLTVILILFEVTGQYEIVLPIMFAAVTSALVARLAYPYTMETYVLEKENVRVGFGI HHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEE ALTIAGNISVLEVMQRKFVKFFDVTKVENIIDAFYNTRDSHFFITTPEGTFVGIIGLDEM EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCHH SLVLKDGIFPGMIADDLVKKNVTVLYDTSKLDEALKIFEISEYSTLPVVEYHSRKLLGIL HHHHHCCCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHEECCCCCCCCHHHCCHHHHHHH KQDEAFSYYRKQMNLIGEDAGELADQRTA HCCHHHHHHHHHHHHHCCCHHHHHHCCCC >Mature Secondary Structure SWLFKNSRIKRRVIVLTYLILRKSRYFKGSSQQFVRMTWASFLAQLNLNQDLPFLLVAV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FVGLVTGYVAVIFHDAIKIISSYLFYGTTALGLPTFNNYLRIFLLPLIPALGGLIVGLYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AFVVKARPEHGLPSVIKAVAQKNGKIPTKNWIHKTITSVVSIGTGGGGGREAPIAQVGAS HHEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IGSTVAQWLKFSPGRTRTLLGCGAAAGLAAVFNAPIGGVMFAVEVILGDFSVKTFSPIVV HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHH AAVVGTVLSRSYLGNYPTFQVPEYSLVSNTELVFYFILGVLAGLTAVLFIRTFYFIEEHI HHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKIEKRFRIPAWLMPAIGGLLCGLISMWVPELYGFSYEVINKALIGQESWENMVAVYLLK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHH PVVVALTVGSGGSGGMFAPTMKMGAMLGGMFGKVVNNLFPAITAASGAYALVGMGAVTAG HHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IMRAPLTVILILFEVTGQYEIVLPIMFAAVTSALVARLAYPYTMETYVLEKENVRVGFGI HHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEE ALTIAGNISVLEVMQRKFVKFFDVTKVENIIDAFYNTRDSHFFITTPEGTFVGIIGLDEM EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCHH SLVLKDGIFPGMIADDLVKKNVTVLYDTSKLDEALKIFEISEYSTLPVVEYHSRKLLGIL HHHHHCCCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHEECCCCCCCCHHHCCHHHHHHH KQDEAFSYYRKQMNLIGEDAGELADQRTA HCCHHHHHHHHHHHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]