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The map label for this gene is crtB [H]

Identifier: 21674208

GI number: 21674208

Start: 1300012

End: 1300944

Strand: Direct

Name: crtB [H]

Synonym: CT1386

Alternate gene names: 21674208

Gene position: 1300012-1300944 (Clockwise)

Preceding gene: 21674207

Following gene: 21674209

Centisome position: 60.33

GC content: 56.48

Gene sequence:

>933_bases
ATGAACTACAGCTATAACGGACAGACAGTGCTTCACGACGCAGGCCAAAAGCTGTCGCTCCCGAACGCCTACGACTACTG
CCGCCAGATCGCCCGGCACCACGCCAAGACCTTCTACCTCGCCGCCAAATTCCTGCCCAAACGCCAGCAGAACCCGATCT
TTGCCATGTATGCCCTGTTGCGCACGGTGGACGACCTGGTCGATCTGGCGCAGGACAAGCTGAGCAACGGCCAGTTGACA
CGCAAGGAGATCAATGACTCGATTGCCGACTGGAAAATGCGCCTTCGCGCCTGTTACGATGGCTCGCCGAGCAACGACCC
GATCCTCATGGCCTGGCAGGATACCCTGCGTCACTACTCGATTCCCATCGAACTGCCGCTCGACCTGATCGACGGAGTGG
CGATGGACATCGACTTCAAGACCTTCGAGACCTTCGACGAACTCTACGTTTACTGCTACAAGGTGGCCTCGGTAGTCGGC
CTCATGACGGTCGAAATTTTCGGTTACAGCAACAAGGAGGCACTCCAGCACGCTATCGACCTCGGCATCGCCATGCAGCT
CACCAACATCCTGCGCGACATCGGCGAGGACATCGACCGCAACCGCATCTATTTGCCGCTGGAGGATTTACGGCGTTTCA
ACTACAGCCGCGAGGAGTTCATGAGCCGCACGATGAACAACAAGTTCGTCGATCTCATGAAGTTCCAGATCGATCGCGCC
CGAAAGTATTACGCCTCGGCTGACCTTGGCATTCCAATGCTTGAAAAAAACAGTCGTCTCGCCGTCGGCATCAGCAGCCG
CAACTACAGCGACATCCTCAAGGCTATCGAAGAGAACAGCTACGATGTCTTCACCCAGCGCGCCTACCGCTCGTTTTACC
AGAAACTGAGCACCCTGCCGTCGATCTGGATCAAAACCATGATCTCGGCCTGA

Upstream 100 bases:

>100_bases
ACACAAAAACGAGCTGGCAAATGCAAAAATCAGGCCGTTCTGCTCACAAGGCAACAGACGTCCCGGCTAACAGACAGGCA
AAACCAGCGGCAAGAGTTTC

Downstream 100 bases:

>100_bases
CCCGCGCAAGCTTCAGATAACCCGTTTTACTTTTATCACTTCAGACCATCAGCATGTCCAACGCACCAGAACAGAAGAAT
CCGCAGAACGATCCGTCACC

Product: phytoene desaturase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNYSYNGQTVLHDAGQKLSLPNAYDYCRQIARHHAKTFYLAAKFLPKRQQNPIFAMYALLRTVDDLVDLAQDKLSNGQLT
RKEINDSIADWKMRLRACYDGSPSNDPILMAWQDTLRHYSIPIELPLDLIDGVAMDIDFKTFETFDELYVYCYKVASVVG
LMTVEIFGYSNKEALQHAIDLGIAMQLTNILRDIGEDIDRNRIYLPLEDLRRFNYSREEFMSRTMNNKFVDLMKFQIDRA
RKYYASADLGIPMLEKNSRLAVGISSRNYSDILKAIEENSYDVFTQRAYRSFYQKLSTLPSIWIKTMISA

Sequences:

>Translated_310_residues
MNYSYNGQTVLHDAGQKLSLPNAYDYCRQIARHHAKTFYLAAKFLPKRQQNPIFAMYALLRTVDDLVDLAQDKLSNGQLT
RKEINDSIADWKMRLRACYDGSPSNDPILMAWQDTLRHYSIPIELPLDLIDGVAMDIDFKTFETFDELYVYCYKVASVVG
LMTVEIFGYSNKEALQHAIDLGIAMQLTNILRDIGEDIDRNRIYLPLEDLRRFNYSREEFMSRTMNNKFVDLMKFQIDRA
RKYYASADLGIPMLEKNSRLAVGISSRNYSDILKAIEENSYDVFTQRAYRSFYQKLSTLPSIWIKTMISA
>Mature_310_residues
MNYSYNGQTVLHDAGQKLSLPNAYDYCRQIARHHAKTFYLAAKFLPKRQQNPIFAMYALLRTVDDLVDLAQDKLSNGQLT
RKEINDSIADWKMRLRACYDGSPSNDPILMAWQDTLRHYSIPIELPLDLIDGVAMDIDFKTFETFDELYVYCYKVASVVG
LMTVEIFGYSNKEALQHAIDLGIAMQLTNILRDIGEDIDRNRIYLPLEDLRRFNYSREEFMSRTMNNKFVDLMKFQIDRA
RKYYASADLGIPMLEKNSRLAVGISSRNYSDILKAIEENSYDVFTQRAYRSFYQKLSTLPSIWIKTMISA

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

Organism=Homo sapiens, GI124517691, Length=305, Percent_Identity=21.6393442622951, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 36032; Mature: 36032

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYSYNGQTVLHDAGQKLSLPNAYDYCRQIARHHAKTFYLAAKFLPKRQQNPIFAMYALL
CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RTVDDLVDLAQDKLSNGQLTRKEINDSIADWKMRLRACYDGSPSNDPILMAWQDTLRHYS
HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCC
IPIELPLDLIDGVAMDIDFKTFETFDELYVYCYKVASVVGLMTVEIFGYSNKEALQHAID
CCEECCHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
LGIAMQLTNILRDIGEDIDRNRIYLPLEDLRRFNYSREEFMSRTMNNKFVDLMKFQIDRA
HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHH
RKYYASADLGIPMLEKNSRLAVGISSRNYSDILKAIEENSYDVFTQRAYRSFYQKLSTLP
HHHHHHCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SIWIKTMISA
HHHHHHHHCC
>Mature Secondary Structure
MNYSYNGQTVLHDAGQKLSLPNAYDYCRQIARHHAKTFYLAAKFLPKRQQNPIFAMYALL
CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RTVDDLVDLAQDKLSNGQLTRKEINDSIADWKMRLRACYDGSPSNDPILMAWQDTLRHYS
HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCC
IPIELPLDLIDGVAMDIDFKTFETFDELYVYCYKVASVVGLMTVEIFGYSNKEALQHAID
CCEECCHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
LGIAMQLTNILRDIGEDIDRNRIYLPLEDLRRFNYSREEFMSRTMNNKFVDLMKFQIDRA
HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHH
RKYYASADLGIPMLEKNSRLAVGISSRNYSDILKAIEENSYDVFTQRAYRSFYQKLSTLP
HHHHHHCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SIWIKTMISA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8018713; 8905231 [H]