Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21674158

Identifier: 21674158

GI number: 21674158

Start: 1256860

End: 1257459

Strand: Reverse

Name: 21674158

Synonym: CT1336

Alternate gene names: NA

Gene position: 1257459-1256860 (Counterclockwise)

Preceding gene: 21674159

Following gene: 21674157

Centisome position: 58.35

GC content: 63.17

Gene sequence:

>600_bases
ATGGAGAAGCGCCTGCCGGACGCCTGCCTTTCGGAGGTGATTGGCAAGGAGCAGCTCGATGAGGCCCTCGACCTCTACCG
CGGTGACGGTATCGATGCCAGGATTGCCCGCGCCGCCGCCGAAGTCGAGGGGCTTTACTATGGAAAGCTGACCCGCGCCG
AGGAGATCGTTGCCTTTGCCCGGAGAATCGGCGCGAAAAGGATCGGCCTTGCTACCTGTGTCGGTCTCGCCGGAGAGGCG
CGCGTTTTCGCGAAGATTCTCGAAGCCAACGGATTCGAGCCGTTCTCGGCGCTCTGCAAGGCGGGCGCGGTGGATAAAAG
CCAAATCGGCATCGCCGAGGAGCTGAAGATCACGCCCGGCAGCCACGAATCGCTCTGCAATCCGGTGCTGCAAGCCCGCG
TGATGAACGAACAGCCGACCGACCTCAACGTTGTCATTGGCCTCTGCGTTGGCCATGACAGCCTTTTCACGAAGCACTCA
GCCGCTCCGGTCACGACGCTGATCGTCAAGGACCGGGTGCTCGGCCACAATCCCGCCGCCGCGCTCTACGCCTCGGGCTC
TTATTACAAACGCCTGCTGGAGCCGGGCCGCGAGCTGTGA

Upstream 100 bases:

>100_bases
ACCCATTTTGATAATGACTGTTATGAACGATGAGTTGAAGGCTGAGGACGCTGGAAACGAACGCGGCTGCGTGGATTGCC
ATACGATGAGCTGCTACCGG

Downstream 100 bases:

>100_bases
CGTTTCAAAGAACCTTTTGAGAGAGTCAGAGATGAAAAGAGCATTCTGGATAGTCATCATCGCGTTGCTTTCAATGCAGT
TTCCTGCGGTGTGGCAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MEKRLPDACLSEVIGKEQLDEALDLYRGDGIDARIARAAAEVEGLYYGKLTRAEEIVAFARRIGAKRIGLATCVGLAGEA
RVFAKILEANGFEPFSALCKAGAVDKSQIGIAEELKITPGSHESLCNPVLQARVMNEQPTDLNVVIGLCVGHDSLFTKHS
AAPVTTLIVKDRVLGHNPAAALYASGSYYKRLLEPGREL

Sequences:

>Translated_199_residues
MEKRLPDACLSEVIGKEQLDEALDLYRGDGIDARIARAAAEVEGLYYGKLTRAEEIVAFARRIGAKRIGLATCVGLAGEA
RVFAKILEANGFEPFSALCKAGAVDKSQIGIAEELKITPGSHESLCNPVLQARVMNEQPTDLNVVIGLCVGHDSLFTKHS
AAPVTTLIVKDRVLGHNPAAALYASGSYYKRLLEPGREL
>Mature_199_residues
MEKRLPDACLSEVIGKEQLDEALDLYRGDGIDARIARAAAEVEGLYYGKLTRAEEIVAFARRIGAKRIGLATCVGLAGEA
RVFAKILEANGFEPFSALCKAGAVDKSQIGIAEELKITPGSHESLCNPVLQARVMNEQPTDLNVVIGLCVGHDSLFTKHS
AAPVTTLIVKDRVLGHNPAAALYASGSYYKRLLEPGREL

Specific function: Unknown

COG id: COG4887

COG function: function code R; Uncharacterized metal-binding protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014997 [H]

Pfam domain/function: PF08901 DUF1847 [H]

EC number: NA

Molecular weight: Translated: 21377; Mature: 21377

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRLPDACLSEVIGKEQLDEALDLYRGDGIDARIARAAAEVEGLYYGKLTRAEEIVAFA
CCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RRIGAKRIGLATCVGLAGEARVFAKILEANGFEPFSALCKAGAVDKSQIGIAEELKITPG
HHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCHHHEEECCC
SHESLCNPVLQARVMNEQPTDLNVVIGLCVGHDSLFTKHSAAPVTTLIVKDRVLGHNPAA
CHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHCCCCCCHHHHHHHHHHCCCCCCH
ALYASGSYYKRLLEPGREL
HEEECCHHHHHHHCCCCCC
>Mature Secondary Structure
MEKRLPDACLSEVIGKEQLDEALDLYRGDGIDARIARAAAEVEGLYYGKLTRAEEIVAFA
CCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RRIGAKRIGLATCVGLAGEARVFAKILEANGFEPFSALCKAGAVDKSQIGIAEELKITPG
HHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCHHHEEECCC
SHESLCNPVLQARVMNEQPTDLNVVIGLCVGHDSLFTKHSAAPVTTLIVKDRVLGHNPAA
CHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHCCCCCCHHHHHHHHHHCCCCCCH
ALYASGSYYKRLLEPGREL
HEEECCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]