| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674134
Identifier: 21674134
GI number: 21674134
Start: 1232086
End: 1232607
Strand: Reverse
Name: 21674134
Synonym: CT1311
Alternate gene names: NA
Gene position: 1232607-1232086 (Counterclockwise)
Preceding gene: 21674145
Following gene: 21674133
Centisome position: 57.2
GC content: 50.19
Gene sequence:
>522_bases ATGTTCCCGCCACGGAGAAAGCACCACATTTGGCCAATGTCGCTTTACAGAACCTATAACCTTTCCCACAGGGACGAAAG AAGAGCTCTCATGAACAGAACGGTTGTGGTGGCTGTGGCGGTCGTGGTGTGTTGTGGCTTGAGCGGCTGCACCGGCCCCA CTGACCAGAAAGTGAATTTACCCCATACGGACCTCAATGGCGCCATCGTTTCTCCTGCCAATACCCCCCAGTCATCTTTA GTCAGCGATATGCCGCCCTGGATCGACCTGTATCGGGAAAGAAACCTGGTGAACGTTTCCTCCGTTGATCATGTCGTCAT TGTCATTTTCGAAACACAGGGGAGCCGGGAAGAGGTTTATCACCACTACTTCGACAAGTTCAACGGTGAGGAGAATTTTT CATCCTTTCGGTACAACCGCGACATCATCAGTTTCGTCAAAGATGGTTACGGCATCAAAATTACCCTGCTCGACTCGACC AAAAATCTCTGGTCACTTGAATATCATCGCCAGATGATCTGA
Upstream 100 bases:
>100_bases AAATAATCAATGATCACCAAAAAAAGAGCATACGCGCACAGGAGGACGATTTATTTATAAAAACGGATGACGTCGCCTCT TTGTTTATTGAAAAAAATGT
Downstream 100 bases:
>100_bases ACCCCCAAGACGGTCGAGCACTCCCGTTTTTTATTCTCTTTTCAGCGGGGCTTTACCGCTGCATCTTTTTCTTTTCAACA TGGTATCTCCGTTTTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MFPPRRKHHIWPMSLYRTYNLSHRDERRALMNRTVVVAVAVVVCCGLSGCTGPTDQKVNLPHTDLNGAIVSPANTPQSSL VSDMPPWIDLYRERNLVNVSSVDHVVIVIFETQGSREEVYHHYFDKFNGEENFSSFRYNRDIISFVKDGYGIKITLLDST KNLWSLEYHRQMI
Sequences:
>Translated_173_residues MFPPRRKHHIWPMSLYRTYNLSHRDERRALMNRTVVVAVAVVVCCGLSGCTGPTDQKVNLPHTDLNGAIVSPANTPQSSL VSDMPPWIDLYRERNLVNVSSVDHVVIVIFETQGSREEVYHHYFDKFNGEENFSSFRYNRDIISFVKDGYGIKITLLDST KNLWSLEYHRQMI >Mature_173_residues MFPPRRKHHIWPMSLYRTYNLSHRDERRALMNRTVVVAVAVVVCCGLSGCTGPTDQKVNLPHTDLNGAIVSPANTPQSSL VSDMPPWIDLYRERNLVNVSSVDHVVIVIFETQGSREEVYHHYFDKFNGEENFSSFRYNRDIISFVKDGYGIKITLLDST KNLWSLEYHRQMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20015; Mature: 20015
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPPRRKHHIWPMSLYRTYNLSHRDERRALMNRTVVVAVAVVVCCGLSGCTGPTDQKVNL CCCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PHTDLNGAIVSPANTPQSSLVSDMPPWIDLYRERNLVNVSSVDHVVIVIFETQGSREEVY CCCCCCCEEECCCCCCHHHHHHCCCHHHHHHHCCCEEEECCCCEEEEEEECCCCCHHHHH HHYFDKFNGEENFSSFRYNRDIISFVKDGYGIKITLLDSTKNLWSLEYHRQMI HHHHHHCCCCCCHHHHHHCHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHCC >Mature Secondary Structure MFPPRRKHHIWPMSLYRTYNLSHRDERRALMNRTVVVAVAVVVCCGLSGCTGPTDQKVNL CCCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PHTDLNGAIVSPANTPQSSLVSDMPPWIDLYRERNLVNVSSVDHVVIVIFETQGSREEVY CCCCCCCEEECCCCCCHHHHHHCCCHHHHHHHCCCEEEECCCCEEEEEEECCCCCHHHHH HHYFDKFNGEENFSSFRYNRDIISFVKDGYGIKITLLDSTKNLWSLEYHRQMI HHHHHHCCCCCCHHHHHHCHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA