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The map label for this gene is bchD

Identifier: 21674119

GI number: 21674119

Start: 1216054

End: 1217916

Strand: Reverse

Name: bchD

Synonym: CT1296

Alternate gene names: 21674119

Gene position: 1217916-1216054 (Counterclockwise)

Preceding gene: 21674120

Following gene: 21674118

Centisome position: 56.52

GC content: 60.33

Gene sequence:

>1863_bases
ATGATAGCATTTACCGACATTGTAGGAATGGATCTGGCCAAGCAGGCGCTCATGCTCTTGGCCGTCGATCCCTCCCTTGG
CGGTGTCGTGATTCCTTCGACCGTAGGTTCGGGAAAATCGACGCTCGCAAGGGCATTTGCCGACATTCTGCCTGAAGGCA
CTCCCTTTGTGGAGCTGCCGCTGAACGTGACCGAAGACCGTCTCATCGGCGGCGTCGATCTCGAAGCCACCCTTGCTTCA
GGCCAGCGTGTCGTGCAGCACGGTGTGCTTTCAAAGGCGCACAAGGGCGTTCTCTATGTCGATTCGCTCAGCCTGCTCGA
CAGCTCCGCCGTGTCGCACATCATGGACGCCATGAGCCGTGGCGCGGTGATCGTTGAGCGCGAGGGACTCAGCGAGGTGC
ATCCGGCGGACTTCATGCTGGTTGGCACCTACGACCCGAGTGATGGCGAGGTGCGCATGGGCCTGCTCGACCGCATCGGT
ATTATTGTGCCGTTCACACCGGTGAACGACTATCGCGCCCGCAAGCAGATTGTCAGTCTCGTGATGGGCACGCGTAACGA
AGAGGATACGCAGGATGAACTGCGCATGCTTCGCGGCATCATCGGCGCGGCAAGGGAGCAGTTGCATCACGTCTCGATTA
CCAACGAGCAGATCAAGGGTCTTATCCAGACCGCCATCAGCCTTGGCGTCGAGGGCAACCGCGTCGATATTTTCGCGATC
CGTGCTGCCATCGCCAACGCTGCGCTCAACCAGCGTACCGAGGTGGACGACGAAGATCTGAAGCTCGCCATGAAGCTGGT
GCTGGTGCCGAGGGCGACCCGTATGCCCGAGCGCGAACCCAACCCCGAGGAGATGGCCCAGGACGAGCCGCCGCCGCAGG
AGGAGCAGCCGCAGGACGAAGCCGAGGATCAGAACGCACCGCCGGACGAGGCCGACTCCGATGCCGACGAGGAGCAGGAG
GAGACTCCCGACATGATCGAGGAGTTGATGATGGATGCCGTTGAGACCGAACTGCCCGACAACATCCTCAACATCTCGCT
CGCTTCCAAGAAGAAGGCAAAAAGCGGCAGTCGAGGCGAGGCGCTGAACAACAAGCGAGGCCGCTTCGTGCGTTCGCAGC
CGGGCGAAATCAAGAGCGGCAAGGTCGCCTTGATTCCGACGCTGATTTCCGCCGCACCGTGGCAGGCATCGAGAAAAGCC
GAGCAGGCAAAAAAGGGCATTAAGTCTACGGCTGCACTCATCATCGGCAAGGATGACATCAAGATCAAGCGTTTCCGCGA
CAAGTCCGGCACGCTCTTCATCTTCATGGTGGACGCGTCCGGCTCGATGGCGCTGAACCGCATGCGCCAGGCCAAGGGCG
CGGTGGCGAGCCTGTTGCAGAACGCTTACGTGCATCGCGACCAGGTTTCGCTGATCTCGTTCCGTGGCAAGCAGGCGCAG
GTGCTCCTGCCACCATCGCAGAGCGTGGATCGCGCCAAACGAGAGCTTGACGTGCTGCCGACTGGGGGCGGAACTCCGCT
TGCCTCGGCCTTGCTTACCGGCTGGGAAACCGCCAAGCAGGCGCGCGCCAAAGGTATCACGCAAATCATGTTCGTCATGA
TCACCGACGGTCGCGGCAATATTCCGCTGGGTGCTGCATACGATCCCAACGCGACCAAAGCGTCCAAGGAGGAGCTTGAA
AAAGAGGTCGAAGCATTAGCCCTCTCCATCCAGGCCGATGGCATCGCCTCGATTGTGGTCGATACCCAGATGAACTACTT
GTCACGAGGCGAAGCACCCAAGCTCGCGCAGAAACTCGGTGGCCGGTACTTCTACCTTCCCAACGCCAAAGCTGAACAGA
TCGTCGAAGCTGCGTTGAGCTGA

Upstream 100 bases:

>100_bases
TTCGCCACCGCCTTCGCAAGGATCCGCTCGAAACCGTCGATGCGGGAGAGAAGATCGATCGCGAACTCGCAAAAGTACTG
GGAGAGGCCGAAGCAGCAGC

Downstream 100 bases:

>100_bases
CCTGTCTTCTTTGTCATTTGCCGTCTCGCTGTAAAGCGGGACGGCATGATGGCTTCTTTTACTCCGAATCGGAACTTTGT
AGTACCCCGCCATCCTCTTT

Product: magnesium-chelatase, subunit D

Products: NA

Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MIAFTDIVGMDLAKQALMLLAVDPSLGGVVIPSTVGSGKSTLARAFADILPEGTPFVELPLNVTEDRLIGGVDLEATLAS
GQRVVQHGVLSKAHKGVLYVDSLSLLDSSAVSHIMDAMSRGAVIVEREGLSEVHPADFMLVGTYDPSDGEVRMGLLDRIG
IIVPFTPVNDYRARKQIVSLVMGTRNEEDTQDELRMLRGIIGAAREQLHHVSITNEQIKGLIQTAISLGVEGNRVDIFAI
RAAIANAALNQRTEVDDEDLKLAMKLVLVPRATRMPEREPNPEEMAQDEPPPQEEQPQDEAEDQNAPPDEADSDADEEQE
ETPDMIEELMMDAVETELPDNILNISLASKKKAKSGSRGEALNNKRGRFVRSQPGEIKSGKVALIPTLISAAPWQASRKA
EQAKKGIKSTAALIIGKDDIKIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVSLISFRGKQAQ
VLLPPSQSVDRAKRELDVLPTGGGTPLASALLTGWETAKQARAKGITQIMFVMITDGRGNIPLGAAYDPNATKASKEELE
KEVEALALSIQADGIASIVVDTQMNYLSRGEAPKLAQKLGGRYFYLPNAKAEQIVEAALS

Sequences:

>Translated_620_residues
MIAFTDIVGMDLAKQALMLLAVDPSLGGVVIPSTVGSGKSTLARAFADILPEGTPFVELPLNVTEDRLIGGVDLEATLAS
GQRVVQHGVLSKAHKGVLYVDSLSLLDSSAVSHIMDAMSRGAVIVEREGLSEVHPADFMLVGTYDPSDGEVRMGLLDRIG
IIVPFTPVNDYRARKQIVSLVMGTRNEEDTQDELRMLRGIIGAAREQLHHVSITNEQIKGLIQTAISLGVEGNRVDIFAI
RAAIANAALNQRTEVDDEDLKLAMKLVLVPRATRMPEREPNPEEMAQDEPPPQEEQPQDEAEDQNAPPDEADSDADEEQE
ETPDMIEELMMDAVETELPDNILNISLASKKKAKSGSRGEALNNKRGRFVRSQPGEIKSGKVALIPTLISAAPWQASRKA
EQAKKGIKSTAALIIGKDDIKIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVSLISFRGKQAQ
VLLPPSQSVDRAKRELDVLPTGGGTPLASALLTGWETAKQARAKGITQIMFVMITDGRGNIPLGAAYDPNATKASKEELE
KEVEALALSIQADGIASIVVDTQMNYLSRGEAPKLAQKLGGRYFYLPNAKAEQIVEAALS
>Mature_620_residues
MIAFTDIVGMDLAKQALMLLAVDPSLGGVVIPSTVGSGKSTLARAFADILPEGTPFVELPLNVTEDRLIGGVDLEATLAS
GQRVVQHGVLSKAHKGVLYVDSLSLLDSSAVSHIMDAMSRGAVIVEREGLSEVHPADFMLVGTYDPSDGEVRMGLLDRIG
IIVPFTPVNDYRARKQIVSLVMGTRNEEDTQDELRMLRGIIGAAREQLHHVSITNEQIKGLIQTAISLGVEGNRVDIFAI
RAAIANAALNQRTEVDDEDLKLAMKLVLVPRATRMPEREPNPEEMAQDEPPPQEEQPQDEAEDQNAPPDEADSDADEEQE
ETPDMIEELMMDAVETELPDNILNISLASKKKAKSGSRGEALNNKRGRFVRSQPGEIKSGKVALIPTLISAAPWQASRKA
EQAKKGIKSTAALIIGKDDIKIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVSLISFRGKQAQ
VLLPPSQSVDRAKRELDVLPTGGGTPLASALLTGWETAKQARAKGITQIMFVMITDGRGNIPLGAAYDPNATKASKEELE
KEVEALALSIQADGIASIVVDTQMNYLSRGEAPKLAQKLGGRYFYLPNAKAEQIVEAALS

Specific function: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BCHD_CHLTE (Q93SW0)

Other databases:

- EMBL:   AY005135
- EMBL:   AE006470
- RefSeq:   NP_662184.1
- ProteinModelPortal:   Q93SW0
- SMR:   Q93SW0
- GeneID:   1006657
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT1296
- NMPDR:   fig|194439.1.peg.1278
- TIGR:   CT1296
- HOGENOM:   HBG553490
- OMA:   GSMALNR
- ProtClustDB:   CLSK904067
- BioCyc:   CTEP194439:CT_1296-MONOMER
- BRENDA:   6.6.1.1
- GO:   GO:0015979
- InterPro:   IPR003593
- InterPro:   IPR011776
- InterPro:   IPR000523
- InterPro:   IPR002035
- SMART:   SM00382
- SMART:   SM00327
- TIGRFAMs:   TIGR02031

Pfam domain/function: PF01078 Mg_chelatase; PF00092 VWA

EC number: =6.6.1.1

Molecular weight: Translated: 67016; Mature: 67016

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAFTDIVGMDLAKQALMLLAVDPSLGGVVIPSTVGSGKSTLARAFADILPEGTPFVELP
CEEEHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEC
LNVTEDRLIGGVDLEATLASGQRVVQHGVLSKAHKGVLYVDSLSLLDSSAVSHIMDAMSR
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHC
GAVIVEREGLSEVHPADFMLVGTYDPSDGEVRMGLLDRIGIIVPFTPVNDYRARKQIVSL
CEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEHHHHCCEEEECCCCCHHHHHHHHHHH
VMGTRNEEDTQDELRMLRGIIGAAREQLHHVSITNEQIKGLIQTAISLGVEGNRVDIFAI
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCEEEEEHH
RAAIANAALNQRTEVDDEDLKLAMKLVLVPRATRMPEREPNPEEMAQDEPPPQEEQPQDE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCH
AEDQNAPPDEADSDADEEQEETPDMIEELMMDAVETELPDNILNISLASKKKAKSGSRGE
HHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCCC
ALNNKRGRFVRSQPGEIKSGKVALIPTLISAAPWQASRKAEQAKKGIKSTAALIIGKDDI
CCCCCCCCEECCCCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHCEEEEECCCCE
KIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVSLISFRGKQAQ
EEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEE
VLLPPSQSVDRAKRELDVLPTGGGTPLASALLTGWETAKQARAKGITQIMFVMITDGRGN
EEECCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC
IPLGAAYDPNATKASKEELEKEVEALALSIQADGIASIVVDTQMNYLSRGEAPKLAQKLG
CCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCEEEEEEECHHHHHHCCCCHHHHHHHC
GRYFYLPNAKAEQIVEAALS
CEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MIAFTDIVGMDLAKQALMLLAVDPSLGGVVIPSTVGSGKSTLARAFADILPEGTPFVELP
CEEEHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEC
LNVTEDRLIGGVDLEATLASGQRVVQHGVLSKAHKGVLYVDSLSLLDSSAVSHIMDAMSR
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHC
GAVIVEREGLSEVHPADFMLVGTYDPSDGEVRMGLLDRIGIIVPFTPVNDYRARKQIVSL
CEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEHHHHCCEEEECCCCCHHHHHHHHHHH
VMGTRNEEDTQDELRMLRGIIGAAREQLHHVSITNEQIKGLIQTAISLGVEGNRVDIFAI
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCEEEEEHH
RAAIANAALNQRTEVDDEDLKLAMKLVLVPRATRMPEREPNPEEMAQDEPPPQEEQPQDE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCH
AEDQNAPPDEADSDADEEQEETPDMIEELMMDAVETELPDNILNISLASKKKAKSGSRGE
HHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCCC
ALNNKRGRFVRSQPGEIKSGKVALIPTLISAAPWQASRKAEQAKKGIKSTAALIIGKDDI
CCCCCCCCEECCCCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHCEEEEECCCCE
KIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVSLISFRGKQAQ
EEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEE
VLLPPSQSVDRAKRELDVLPTGGGTPLASALLTGWETAKQARAKGITQIMFVMITDGRGN
EEECCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC
IPLGAAYDPNATKASKEELEKEVEALALSIQADGIASIVVDTQMNYLSRGEAPKLAQKLG
CCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCEEEEEEECHHHHHHCCCCHHHHHHHC
GRYFYLPNAKAEQIVEAALS
CEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901