| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is murB [H]
Identifier: 21674053
GI number: 21674053
Start: 1151355
End: 1152947
Strand: Reverse
Name: murB [H]
Synonym: CT1228
Alternate gene names: 21674053
Gene position: 1152947-1151355 (Counterclockwise)
Preceding gene: 21674054
Following gene: 21674052
Centisome position: 53.5
GC content: 62.4
Gene sequence:
>1593_bases ATGACCGAGCCGATTTTTCCCTGTCCTTTCGATGAGCGGATGCCGCTGTCAACCGTCGGTTACTACGGTATCGGCGGGGA GGCTCGCTGGATCGTTCATCCCCGGAGTGTTGGGGAGCTCGCTTTGGTGCTTGACCGCTGCCGTCAGCTTGGCCTGCCGG TCATTATCGCTGGAAAGGGGAGCAACATGCTCTTTTCGGATGAGGAATTCCCCGGCGTGGTCATCGTTCTTGATGCGATG AATCGCATGTTTCAGGTCTCCGACGAGCTGTTTTTCTGCGAGGCAGGGGTTGAGAACACCGACGCGGCTATCGTGCTTCA GGAGGCGGGCCGGTGTGGCGGGGAGTGGCTTTACCGCCTGCCGGGAACCATCGGCGCGACGGTGCGCATGAACGGGCGCT GCTACGGACGCGAGATTTCCGCCGTGGCCAGAAGCGTCGTGACGGTTGGGCTGGATGGCGCGGTTCGCTGGCGTCGTGCT GACGAGGTGTTCCTCGGCTACAAGGAGACCCGCCTGATGCAAAGCCCGGAGATCGTGGTTGGCGCGATGCTTGAATTTGC TGAGCACGATGAGCCCGAAGCTATCGGCAAGCGGATGCAGGAGTACGGCGACGACCGCGACGCGAAGCACCAGTTCGATT TTCCAAGCTGCGGTTCTACGTTCAAAAACAGCTACGATGCGGGCCGCCCGAGCGGGCAGATTTTCGACGCTCTCGGCTTT CGGGGTCGCCGAGAAGGCGGGGCGCAGGTGAGCGACCACCATGCCAACTTCATTTTCAACACTGGCGGGGCGAAGGCTGC CGATGTGCTGAATCTTTGTGCCGCCATGCGCACCGAAGCGCGCGAGAAGTTGGGTGCGACGCTGGAGCTCGAACTCCAGT GCGCCGGACTGTTCCAAACAGCGCTGCTCGACGCCTGTGGCATCGCCTCGACGCCCGAGCCTTCGCGCCCCGGTTATGGC TGGACAGGCCTGTTGCCCTTCCCGGATGCTTGCGATGACGCCTTTCCGCGCGTCTTGCTGCAAGGTGAAGCGCTCGACTA CTTCTGCCGTGACGCCGTGTTTCCGGCTGGCATCGCCGTCGAAGTCGGCCAGCTCATTCCGCTCGACGAGGCGCGAAAAG CGCCGGATCGGCCCTTCATCCGCTGGACGACGCGCGACGAATCGGGTGTGGCGTTTTCATTGCATCCCGATGCTCCGGTG GGAGCGTTCGTTGATCGTTTGTGGGAGCACAACGTCTCCGAGCTGTTCATCGGCCAAGGCGGCGGAAGCGGGCAGTATCT CGAATTCGAGGTGACGCCGGAAGGCCACTGGCTCGCCATCCGCTTCGACGCCCCACGCCAGCGAACCGCCGGGCACGAAA TTCCGTCGGAGGAACTCTGGCGCAGCCAGGCAACGCCCTTCGCCAGCGAAAAAGGCTTCGGCATAGAGCTTTCATACGCC CTGCTGGAGCCGTTTATCCACGACGATACGCTCCGATTGCAATGCGCCGTCAGCCTCGGAGATGGGCGTTACGGACTATT TCCATGGTGGCGTGGAGAGGGGGCGCCGGATTTCCACCAGCCGGAGAGGTATTGCGTAGTGCGGTTGGGGTGA
Upstream 100 bases:
>100_bases CTCTTTTTCGTGCTTTTTTTCAGGGATAGCGCCATGTCGCCTATATTTCAACCTTTTGACAAGAGCACTGACTGAAACAA GCCTCTCAGATCATTTATTT
Downstream 100 bases:
>100_bases AGATAATAATAATCTTCAATGTTCAACTTTGTTGATAAAATGTCTTTGCTTTCACACTACACCACGGGTTCTTCTCAGAT TACCGTGGGTAAATGGTGAA
Product: UDP-N-acetylenolpyruvoylglucosamine reductase, putative
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MTEPIFPCPFDERMPLSTVGYYGIGGEARWIVHPRSVGELALVLDRCRQLGLPVIIAGKGSNMLFSDEEFPGVVIVLDAM NRMFQVSDELFFCEAGVENTDAAIVLQEAGRCGGEWLYRLPGTIGATVRMNGRCYGREISAVARSVVTVGLDGAVRWRRA DEVFLGYKETRLMQSPEIVVGAMLEFAEHDEPEAIGKRMQEYGDDRDAKHQFDFPSCGSTFKNSYDAGRPSGQIFDALGF RGRREGGAQVSDHHANFIFNTGGAKAADVLNLCAAMRTEAREKLGATLELELQCAGLFQTALLDACGIASTPEPSRPGYG WTGLLPFPDACDDAFPRVLLQGEALDYFCRDAVFPAGIAVEVGQLIPLDEARKAPDRPFIRWTTRDESGVAFSLHPDAPV GAFVDRLWEHNVSELFIGQGGGSGQYLEFEVTPEGHWLAIRFDAPRQRTAGHEIPSEELWRSQATPFASEKGFGIELSYA LLEPFIHDDTLRLQCAVSLGDGRYGLFPWWRGEGAPDFHQPERYCVVRLG
Sequences:
>Translated_530_residues MTEPIFPCPFDERMPLSTVGYYGIGGEARWIVHPRSVGELALVLDRCRQLGLPVIIAGKGSNMLFSDEEFPGVVIVLDAM NRMFQVSDELFFCEAGVENTDAAIVLQEAGRCGGEWLYRLPGTIGATVRMNGRCYGREISAVARSVVTVGLDGAVRWRRA DEVFLGYKETRLMQSPEIVVGAMLEFAEHDEPEAIGKRMQEYGDDRDAKHQFDFPSCGSTFKNSYDAGRPSGQIFDALGF RGRREGGAQVSDHHANFIFNTGGAKAADVLNLCAAMRTEAREKLGATLELELQCAGLFQTALLDACGIASTPEPSRPGYG WTGLLPFPDACDDAFPRVLLQGEALDYFCRDAVFPAGIAVEVGQLIPLDEARKAPDRPFIRWTTRDESGVAFSLHPDAPV GAFVDRLWEHNVSELFIGQGGGSGQYLEFEVTPEGHWLAIRFDAPRQRTAGHEIPSEELWRSQATPFASEKGFGIELSYA LLEPFIHDDTLRLQCAVSLGDGRYGLFPWWRGEGAPDFHQPERYCVVRLG >Mature_529_residues TEPIFPCPFDERMPLSTVGYYGIGGEARWIVHPRSVGELALVLDRCRQLGLPVIIAGKGSNMLFSDEEFPGVVIVLDAMN RMFQVSDELFFCEAGVENTDAAIVLQEAGRCGGEWLYRLPGTIGATVRMNGRCYGREISAVARSVVTVGLDGAVRWRRAD EVFLGYKETRLMQSPEIVVGAMLEFAEHDEPEAIGKRMQEYGDDRDAKHQFDFPSCGSTFKNSYDAGRPSGQIFDALGFR GRREGGAQVSDHHANFIFNTGGAKAADVLNLCAAMRTEAREKLGATLELELQCAGLFQTALLDACGIASTPEPSRPGYGW TGLLPFPDACDDAFPRVLLQGEALDYFCRDAVFPAGIAVEVGQLIPLDEARKAPDRPFIRWTTRDESGVAFSLHPDAPVG AFVDRLWEHNVSELFIGQGGGSGQYLEFEVTPEGHWLAIRFDAPRQRTAGHEIPSEELWRSQATPFASEKGFGIELSYAL LEPFIHDDTLRLQCAVSLGDGRYGLFPWWRGEGAPDFHQPERYCVVRLG
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 58446; Mature: 58314
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPIFPCPFDERMPLSTVGYYGIGGEARWIVHPRSVGELALVLDRCRQLGLPVIIAGKG CCCCCCCCCCCCCCCCHHCCEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECC SNMLFSDEEFPGVVIVLDAMNRMFQVSDELFFCEAGVENTDAAIVLQEAGRCGGEWLYRL CCCEECCCCCCCEEEEHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCCHHHEEC PGTIGATVRMNGRCYGREISAVARSVVTVGLDGAVRWRRADEVFLGYKETRLMQSPEIVV CCCEEEEEEECCEEECHHHHHHHHHHHEECCCCCEEEECCCCEEECCHHHHHCCCCCHHH GAMLEFAEHDEPEAIGKRMQEYGDDRDAKHQFDFPSCGSTFKNSYDAGRPSGQIFDALGF HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHCC RGRREGGAQVSDHHANFIFNTGGAKAADVLNLCAAMRTEAREKLGATLELELQCAGLFQT CCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHH ALLDACGIASTPEPSRPGYGWTGLLPFPDACDDAFPRVLLQGEALDYFCRDAVFPAGIAV HHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHEECCCHHHHHHHHCCCCCCCEE EVGQLIPLDEARKAPDRPFIRWTTRDESGVAFSLHPDAPVGAFVDRLWEHNVSELFIGQG ECCCCCCCHHHHCCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECC GGSGQYLEFEVTPEGHWLAIRFDAPRQRTAGHEIPSEELWRSQATPFASEKGFGIELSYA CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEHH LLEPFIHDDTLRLQCAVSLGDGRYGLFPWWRGEGAPDFHQPERYCVVRLG HHHHHHCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure TEPIFPCPFDERMPLSTVGYYGIGGEARWIVHPRSVGELALVLDRCRQLGLPVIIAGKG CCCCCCCCCCCCCCCHHCCEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECC SNMLFSDEEFPGVVIVLDAMNRMFQVSDELFFCEAGVENTDAAIVLQEAGRCGGEWLYRL CCCEECCCCCCCEEEEHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCCHHHEEC PGTIGATVRMNGRCYGREISAVARSVVTVGLDGAVRWRRADEVFLGYKETRLMQSPEIVV CCCEEEEEEECCEEECHHHHHHHHHHHEECCCCCEEEECCCCEEECCHHHHHCCCCCHHH GAMLEFAEHDEPEAIGKRMQEYGDDRDAKHQFDFPSCGSTFKNSYDAGRPSGQIFDALGF HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHCC RGRREGGAQVSDHHANFIFNTGGAKAADVLNLCAAMRTEAREKLGATLELELQCAGLFQT CCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHH ALLDACGIASTPEPSRPGYGWTGLLPFPDACDDAFPRVLLQGEALDYFCRDAVFPAGIAV HHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHEECCCHHHHHHHHCCCCCCCEE EVGQLIPLDEARKAPDRPFIRWTTRDESGVAFSLHPDAPVGAFVDRLWEHNVSELFIGQG ECCCCCCCHHHHCCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECC GGSGQYLEFEVTPEGHWLAIRFDAPRQRTAGHEIPSEELWRSQATPFASEKGFGIELSYA CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEHH LLEPFIHDDTLRLQCAVSLGDGRYGLFPWWRGEGAPDFHQPERYCVVRLG HHHHHHCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA