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The map label for this gene is ybjY [C]

Identifier: 21674046

GI number: 21674046

Start: 1145337

End: 1146506

Strand: Reverse

Name: ybjY [C]

Synonym: CT1221

Alternate gene names: 21674046

Gene position: 1146506-1145337 (Counterclockwise)

Preceding gene: 21674047

Following gene: 21674045

Centisome position: 53.2

GC content: 64.27

Gene sequence:

>1170_bases
ATGAAACCTTTCAGTAAAACACAGCGCATTGTCGCCATTTCTTCAATCGCCGTGGCTATTCTGCTGTTTCTCGTGCTTCG
GCCTGCGCCGTTGCCCGTCGATGCGGGCGTGGCGAGTTACGGGCCGCTGGAGGTCTCCGTCGAAGACGAGGGAATCACGA
GGGTGATCGACCGTTTCACCGTTTCGTCTCCGGTCAACGGCAAGGTGTTGCGGAGCAAACTGGTCGAGGGCGACAGCGTC
CGGGCGGGCATGACAGTGGCCGCGATTCTGCCACCTGAGCAGAATGCGCTGGAGTACCGCGAATCGGCGGCGCAGGCCGG
TTCTGCCTCGGCGTCGGTCAACGAAGCGCTGGCGCGGCAGCACGAAACCTCGGTGCGGCTCGCCCAGGCCCGCCTGAAAG
CGGGGCGCTACGAGCGACTCTACAGCGAAGGCGCGGTCTCGAAGGAGAGCAGCGAGCTGGCCACCGAAGCGGCTTCGGTG
CTCGAAAAGGAGGCGCGCGCGGCAGCGGCGGCCGTCCGGGCGGCGCGAATGCAGGCCACGGCGGCGGAGGCTCGAATCGA
CGCCGGAGTCGCGAGCAAGGCGGTGGATGTCCGCTCGCCGGTCGATGGCAAGGTGCTGCGCATCATCGAAAAGAACGAGC
GCTTCGTGCCCGCCGGAACGCCTCTGGTGGAGATTGGCAATCCGGGGCTGCTCGAAGTGGTGATCGACGTGCTTTCGTCG
GACGCCGTGCGGGTCAGGCCGGGAGACCGCGTCTGGATCGAGGATTGGGGTGGCGGGGGAGCGCTCCCTGGAGTGGTGAA
GCGAATCGAACCGGCTGCTTTCACCAAGGTCTCCGCGCTTGGCATCGAGGAGAAGCGGGTCAATATCATTGCCATGCTCG
AAAAGCCCGAACCGCGCTTGGGCGACAACTTCCGCATTCAGGCGAAGATCGTGACGAGCAAAGCTGACCGCGTGCTCCGC
GTGCCGGTGAGCGCCCTCTTCAGAGGTGACGGTGGCTGGGAGGTGTTCGTCATCGACGCAGGCCGCGCCAAAGTGCGCAA
AATCAAAATCGGCATGAGAGGCGCCGACATGGCCGAAGTGCTTGGAGGCCTCCGCGAAGGCGAAAAGGTCGTGACGCATC
CCCCGAACGAACTGGAACCAGGAATGCGCGTGGCTACGAAGGACGAATAA

Upstream 100 bases:

>100_bases
TTTACGGTTATGGTTACGGTTGCGGTCGTAACGGGAGCACTTGTCGGCAGAAAAATCGTGAAGCTCGACCTGATCGCTGT
TCTGAAAACAAGAGAGTGAT

Downstream 100 bases:

>100_bases
GGAATTATGAATTGAAGAGAAAGAAGAACGGAAAGTTTTTCCATTCTTGAAACCATGCAAAGTCTCAAATGAGCCACACA
ACGTCAACACTTCTCATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Multidrug Resistance Efflux Pump-Like Protein; Membrane Fusion Protein AcrA; Membrane Fusion Protein

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKPFSKTQRIVAISSIAVAILLFLVLRPAPLPVDAGVASYGPLEVSVEDEGITRVIDRFTVSSPVNGKVLRSKLVEGDSV
RAGMTVAAILPPEQNALEYRESAAQAGSASASVNEALARQHETSVRLAQARLKAGRYERLYSEGAVSKESSELATEAASV
LEKEARAAAAAVRAARMQATAAEARIDAGVASKAVDVRSPVDGKVLRIIEKNERFVPAGTPLVEIGNPGLLEVVIDVLSS
DAVRVRPGDRVWIEDWGGGGALPGVVKRIEPAAFTKVSALGIEEKRVNIIAMLEKPEPRLGDNFRIQAKIVTSKADRVLR
VPVSALFRGDGGWEVFVIDAGRAKVRKIKIGMRGADMAEVLGGLREGEKVVTHPPNELEPGMRVATKDE

Sequences:

>Translated_389_residues
MKPFSKTQRIVAISSIAVAILLFLVLRPAPLPVDAGVASYGPLEVSVEDEGITRVIDRFTVSSPVNGKVLRSKLVEGDSV
RAGMTVAAILPPEQNALEYRESAAQAGSASASVNEALARQHETSVRLAQARLKAGRYERLYSEGAVSKESSELATEAASV
LEKEARAAAAAVRAARMQATAAEARIDAGVASKAVDVRSPVDGKVLRIIEKNERFVPAGTPLVEIGNPGLLEVVIDVLSS
DAVRVRPGDRVWIEDWGGGGALPGVVKRIEPAAFTKVSALGIEEKRVNIIAMLEKPEPRLGDNFRIQAKIVTSKADRVLR
VPVSALFRGDGGWEVFVIDAGRAKVRKIKIGMRGADMAEVLGGLREGEKVVTHPPNELEPGMRVATKDE
>Mature_389_residues
MKPFSKTQRIVAISSIAVAILLFLVLRPAPLPVDAGVASYGPLEVSVEDEGITRVIDRFTVSSPVNGKVLRSKLVEGDSV
RAGMTVAAILPPEQNALEYRESAAQAGSASASVNEALARQHETSVRLAQARLKAGRYERLYSEGAVSKESSELATEAASV
LEKEARAAAAAVRAARMQATAAEARIDAGVASKAVDVRSPVDGKVLRIIEKNERFVPAGTPLVEIGNPGLLEVVIDVLSS
DAVRVRPGDRVWIEDWGGGGALPGVVKRIEPAAFTKVSALGIEEKRVNIIAMLEKPEPRLGDNFRIQAKIVTSKADRVLR
VPVSALFRGDGGWEVFVIDAGRAKVRKIKIGMRGADMAEVLGGLREGEKVVTHPPNELEPGMRVATKDE

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081796, Length=393, Percent_Identity=24.1730279898219, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41482; Mature: 41482

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFSKTQRIVAISSIAVAILLFLVLRPAPLPVDAGVASYGPLEVSVEDEGITRVIDRFT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
VSSPVNGKVLRSKLVEGDSVRAGMTVAAILPPEQNALEYRESAAQAGSASASVNEALARQ
CCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
HETSVRLAQARLKAGRYERLYSEGAVSKESSELATEAASVLEKEARAAAAAVRAARMQAT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEARIDAGVASKAVDVRSPVDGKVLRIIEKNERFVPAGTPLVEIGNPGLLEVVIDVLSS
HHHHHHHCCHHHCCEECCCCCCCCEEEEEECCCEEECCCCCEEEECCCCHHHHHHHHHCC
DAVRVRPGDRVWIEDWGGGGALPGVVKRIEPAAFTKVSALGIEEKRVNIIAMLEKPEPRL
CCEEECCCCEEEEEECCCCCCCHHHHHHCCCHHHHHHHHCCCCHHCEEEEEEEECCCCCC
GDNFRIQAKIVTSKADRVLRVPVSALFRGDGGWEVFVIDAGRAKVRKIKIGMRGADMAEV
CCCEEEEEEEEECCCCCEEECCHHHHEECCCCEEEEEEECCCCEEEEEEECCCCCCHHHH
LGGLREGEKVVTHPPNELEPGMRVATKDE
HHHHHCCCEEEECCCCCCCCCCEECCCCC
>Mature Secondary Structure
MKPFSKTQRIVAISSIAVAILLFLVLRPAPLPVDAGVASYGPLEVSVEDEGITRVIDRFT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH
VSSPVNGKVLRSKLVEGDSVRAGMTVAAILPPEQNALEYRESAAQAGSASASVNEALARQ
CCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
HETSVRLAQARLKAGRYERLYSEGAVSKESSELATEAASVLEKEARAAAAAVRAARMQAT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEARIDAGVASKAVDVRSPVDGKVLRIIEKNERFVPAGTPLVEIGNPGLLEVVIDVLSS
HHHHHHHCCHHHCCEECCCCCCCCEEEEEECCCEEECCCCCEEEECCCCHHHHHHHHHCC
DAVRVRPGDRVWIEDWGGGGALPGVVKRIEPAAFTKVSALGIEEKRVNIIAMLEKPEPRL
CCEEECCCCEEEEEECCCCCCCHHHHHHCCCHHHHHHHHCCCCHHCEEEEEEEECCCCCC
GDNFRIQAKIVTSKADRVLRVPVSALFRGDGGWEVFVIDAGRAKVRKIKIGMRGADMAEV
CCCEEEEEEEEECCCCCEEECCHHHHEECCCCEEEEEEECCCCEEEEEEECCCCCCHHHH
LGGLREGEKVVTHPPNELEPGMRVATKDE
HHHHHCCCEEEECCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA