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The map label for this gene is 21673961

Identifier: 21673961

GI number: 21673961

Start: 1060599

End: 1062605

Strand: Reverse

Name: 21673961

Synonym: CT1135

Alternate gene names: NA

Gene position: 1062605-1060599 (Counterclockwise)

Preceding gene: 21673964

Following gene: 21673960

Centisome position: 49.31

GC content: 56.2

Gene sequence:

>2007_bases
ATGGGCAAGATTGACCACTCCGCAGCCGGGGCAATACTGGCCAGCAACAAAAGCAAAGATATCGGACGAATTCTTGGCTA
CCTGATCGCCGGGCACCATACCGGCTTGCCGGATTGGGACAAAGACGCCGGAACCAAAGGCGATCCGCTATCCGAGCGTT
TGAGTAATTCCGAACATCTGCAACATGCCTTGAAAGGTAATCCTCCCGAAAACATTCTGGATACGCCTTTACCATCGTCG
TTGCCATGCCAAACCCAGAATGGCGGCGCGGAGCTGGTGCACCTCTGGATCCGGATGCTGTACTCCTGCCTCGTTGATGC
GGACTTTCTTGATACAGAGCGCTTCATGAATCCAGAGACATCTGAACTTCGTCCGAACGGCGTTGATCTGGCAATGCTGA
AAGAGCGTTTTGACCAGCACATGTCGCTCAAAGAGAGCGGTGCTTCGGATACGCCGGTCAACCGGGCGCGAAAAGAGATT
CTCCGCGAGTGCCGCCAAAAAGGCGTGTCGCTGGAGCCGGGACTGTTTTCGCTGACCGTGCCCACCGGCGGCGGCAAAAC
GCTTGCCTCGATGGCCTTCGCGCTCGAACACGCTCTGAAGCACGATAAAAAGCGGATCATCGTGGTGATTCCCTACACCA
GCATCATCGAGCAGACGGCGGCGGTCTATCGCGAAGTGTTCGGAGATGACGCAGTGTTGGAGCACCACAGCAACCTCGAT
CCATCGAGAGAAACTCCGGCATCCCGGCTGGCGACTGAAAACTGGGATGCACCGATTATCGTGACCACCAACGTGCAGTT
TTTCGAGTCGCTCTTCGCGGCCCGAAGCTCGGCCTGCCGCAAGTTGCACAATATCGTCAATTCGGTTGTTGTGCTCGACG
AGGCGCAGATGCTGCCGACCGATTTTCTGCAACCGATAGTCTCGGTCATTAAAATGCTGAGTGCGCATTTCAGAACGTCG
GTCGTGCTCTGCACGGCCACCCAGCCGGTTTTGAGCGGCAAGGTCGGAACCGGCAAAGATATTCTTAAAGGGTTTGACGA
CGGCCGTGTGCGCGAGTTGATGGCCGATCCGGAAAAGCTGTTCGGCATCTTTCAGCGCGTCCGCGTGCGGATGCTTGGCC
AGGCTGATCAACGGCACGAATGGGCTGAGATCGCCAGGCGGCTTTGTGAGCCCGAGCAGGTGTTGTGCATCGTCAACACC
CGCAAGGATTGCCGCGAGCTCCATGACTTGATGCCGGACGGCACGGTTCATCTTTCCGCGCTGATGTGCCCGGAGCATCG
CAGTACCGTCATTGCCGAGTTGAAATCGAAGCTCGTTGCGGGCGAGCCGGTTCGGGTGGTGAGCACCCAGTTGCTCGAAG
CTGGCGTTGACATTGATTTTCCAACGGTCTATCGTTCGTTCAGCGGGCTTGACAGCATCGCACAGGCGGCGGGCCGGTGC
AATCGTGAGGGCAAGCTTGAGCATGGCGATGTTGTGGTGTTCAACCCGCCGAATCCCTCGCCATCGGGCCGCTTGCGCAA
AGCCGAACAGGCCGCCCAGGAGCTGTTCCGCACGGTTCCTGAACTTGCCGCCTCGCTCATGCCGGAAGCGTTCCGCCGTT
ATTTCATGCACTACTTCAGCGGCCTGAATGGCTTCGACACGAAGGGAATCATGGATTTGCTGGCGAGCAACGACGCGGCC
AGATATTTCCAAATCCAGTTCCGCACCGCAGCCAGAAAATTCAAACTCATCGATGATACGCTGCAACACGGCATCATCGT
CAGATATCGCAACGGAAAAGCAAACATCGACGCCTTGATCGATCAACTGCGTTTTGGCGGCCCAAATCGAAAACTGATGC
GGCAACTTCAGCGCTATTCGGTGAATGTCTATGATCCGGATTTGAAAAAACTGATCGAGAACGGCTTGATCGAAGAGGTT
CATGGTGTCTGGGTGCAGACGTCGGAAAGCGCGTACGATCCGGTTTTCGGGTTGAATATCGACGCCAACCTGAATTTTTA
CTGGTAA

Upstream 100 bases:

>100_bases
TGGGCGATGGCTGCCGGTATGCTGCACGATCTCGGCAAATTCAATCCGCGCTGGCAGAAGTATCTGCGCAAGAGCAACGG
CGATTATCTGGAAAAGAGCG

Downstream 100 bases:

>100_bases
GCTCAACAAGGGAGAACAACGTTATGGAGCATTGGAATAAAACATTCTGTCTTGAAGTCAAGGGCGATTACGCCTGCTTC
ACCCGGCCCGAAATGAAGGT

Product: ATP-dependent RNA helicase SrmB, putative

Products: NA

Alternate protein names: Helicase; CRISPR-Associated Helicase Cas3 Family Protein Protein; CRISPR-Associated Helicase Cas3 Domain Protein; CRISPR-Associated HD Domain Protein; CRISPR-Associated Helicase Cas3 Domain-Containing Protein; ATP-Dependent RNA Helicase; CRISPR-Associated Helicase; DEAD/DEAH Box Helicase Domain-Containing Protein; Crispr-Associated Helicase Cas3 Domain Protein; Crispr-Associated Hd Domain Protein; Helicases; CRISPR-Associated Helicase Cas3 Core; CRISPR-Associated Helicase Cas3 Family; Helicase-Like Protein; Cas3 Family CRISPR-Associated Helicase; Helicases-Like Protein; CRISPR-Associated Helicase Cas3 Protein; CRISPR-Associated HD Domain-Containing Protein; ATP-Dependent RNA Helicase SrmB

Number of amino acids: Translated: 668; Mature: 667

Protein sequence:

>668_residues
MGKIDHSAAGAILASNKSKDIGRILGYLIAGHHTGLPDWDKDAGTKGDPLSERLSNSEHLQHALKGNPPENILDTPLPSS
LPCQTQNGGAELVHLWIRMLYSCLVDADFLDTERFMNPETSELRPNGVDLAMLKERFDQHMSLKESGASDTPVNRARKEI
LRECRQKGVSLEPGLFSLTVPTGGGKTLASMAFALEHALKHDKKRIIVVIPYTSIIEQTAAVYREVFGDDAVLEHHSNLD
PSRETPASRLATENWDAPIIVTTNVQFFESLFAARSSACRKLHNIVNSVVVLDEAQMLPTDFLQPIVSVIKMLSAHFRTS
VVLCTATQPVLSGKVGTGKDILKGFDDGRVRELMADPEKLFGIFQRVRVRMLGQADQRHEWAEIARRLCEPEQVLCIVNT
RKDCRELHDLMPDGTVHLSALMCPEHRSTVIAELKSKLVAGEPVRVVSTQLLEAGVDIDFPTVYRSFSGLDSIAQAAGRC
NREGKLEHGDVVVFNPPNPSPSGRLRKAEQAAQELFRTVPELAASLMPEAFRRYFMHYFSGLNGFDTKGIMDLLASNDAA
RYFQIQFRTAARKFKLIDDTLQHGIIVRYRNGKANIDALIDQLRFGGPNRKLMRQLQRYSVNVYDPDLKKLIENGLIEEV
HGVWVQTSESAYDPVFGLNIDANLNFYW

Sequences:

>Translated_668_residues
MGKIDHSAAGAILASNKSKDIGRILGYLIAGHHTGLPDWDKDAGTKGDPLSERLSNSEHLQHALKGNPPENILDTPLPSS
LPCQTQNGGAELVHLWIRMLYSCLVDADFLDTERFMNPETSELRPNGVDLAMLKERFDQHMSLKESGASDTPVNRARKEI
LRECRQKGVSLEPGLFSLTVPTGGGKTLASMAFALEHALKHDKKRIIVVIPYTSIIEQTAAVYREVFGDDAVLEHHSNLD
PSRETPASRLATENWDAPIIVTTNVQFFESLFAARSSACRKLHNIVNSVVVLDEAQMLPTDFLQPIVSVIKMLSAHFRTS
VVLCTATQPVLSGKVGTGKDILKGFDDGRVRELMADPEKLFGIFQRVRVRMLGQADQRHEWAEIARRLCEPEQVLCIVNT
RKDCRELHDLMPDGTVHLSALMCPEHRSTVIAELKSKLVAGEPVRVVSTQLLEAGVDIDFPTVYRSFSGLDSIAQAAGRC
NREGKLEHGDVVVFNPPNPSPSGRLRKAEQAAQELFRTVPELAASLMPEAFRRYFMHYFSGLNGFDTKGIMDLLASNDAA
RYFQIQFRTAARKFKLIDDTLQHGIIVRYRNGKANIDALIDQLRFGGPNRKLMRQLQRYSVNVYDPDLKKLIENGLIEEV
HGVWVQTSESAYDPVFGLNIDANLNFYW
>Mature_667_residues
GKIDHSAAGAILASNKSKDIGRILGYLIAGHHTGLPDWDKDAGTKGDPLSERLSNSEHLQHALKGNPPENILDTPLPSSL
PCQTQNGGAELVHLWIRMLYSCLVDADFLDTERFMNPETSELRPNGVDLAMLKERFDQHMSLKESGASDTPVNRARKEIL
RECRQKGVSLEPGLFSLTVPTGGGKTLASMAFALEHALKHDKKRIIVVIPYTSIIEQTAAVYREVFGDDAVLEHHSNLDP
SRETPASRLATENWDAPIIVTTNVQFFESLFAARSSACRKLHNIVNSVVVLDEAQMLPTDFLQPIVSVIKMLSAHFRTSV
VLCTATQPVLSGKVGTGKDILKGFDDGRVRELMADPEKLFGIFQRVRVRMLGQADQRHEWAEIARRLCEPEQVLCIVNTR
KDCRELHDLMPDGTVHLSALMCPEHRSTVIAELKSKLVAGEPVRVVSTQLLEAGVDIDFPTVYRSFSGLDSIAQAAGRCN
REGKLEHGDVVVFNPPNPSPSGRLRKAEQAAQELFRTVPELAASLMPEAFRRYFMHYFSGLNGFDTKGIMDLLASNDAAR
YFQIQFRTAARKFKLIDDTLQHGIIVRYRNGKANIDALIDQLRFGGPNRKLMRQLQRYSVNVYDPDLKKLIENGLIEEVH
GVWVQTSESAYDPVFGLNIDANLNFYW

Specific function: Unknown

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74498; Mature: 74367

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIDHSAAGAILASNKSKDIGRILGYLIAGHHTGLPDWDKDAGTKGDPLSERLSNSEHL
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHH
QHALKGNPPENILDTPLPSSLPCQTQNGGAELVHLWIRMLYSCLVDADFLDTERFMNPET
HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
SELRPNGVDLAMLKERFDQHMSLKESGASDTPVNRARKEILRECRQKGVSLEPGLFSLTV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
PTGGGKTLASMAFALEHALKHDKKRIIVVIPYTSIIEQTAAVYREVFGDDAVLEHHSNLD
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHCCCCC
PSRETPASRLATENWDAPIIVTTNVQFFESLFAARSSACRKLHNIVNSVVVLDEAQMLPT
CCCCCCHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCH
DFLQPIVSVIKMLSAHFRTSVVLCTATQPVLSGKVGTGKDILKGFDDGRVRELMADPEKL
HHHHHHHHHHHHHHHHHHHEEEEEECCCHHHCCCCCCCHHHHCCCCCHHHHHHHCCHHHH
FGIFQRVRVRMLGQADQRHEWAEIARRLCEPEQVLCIVNTRKDCRELHDLMPDGTVHLSA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEE
LMCPEHRSTVIAELKSKLVAGEPVRVVSTQLLEAGVDIDFPTVYRSFSGLDSIAQAAGRC
EECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
NREGKLEHGDVVVFNPPNPSPSGRLRKAEQAAQELFRTVPELAASLMPEAFRRYFMHYFS
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLNGFDTKGIMDLLASNDAARYFQIQFRTAARKFKLIDDTLQHGIIVRYRNGKANIDALI
CCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHH
DQLRFGGPNRKLMRQLQRYSVNVYDPDLKKLIENGLIEEVHGVWVQTSESAYDPVFGLNI
HHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCEEECCCCCCCCEEEEEE
DANLNFYW
CCCCEEEC
>Mature Secondary Structure 
GKIDHSAAGAILASNKSKDIGRILGYLIAGHHTGLPDWDKDAGTKGDPLSERLSNSEHL
CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHH
QHALKGNPPENILDTPLPSSLPCQTQNGGAELVHLWIRMLYSCLVDADFLDTERFMNPET
HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
SELRPNGVDLAMLKERFDQHMSLKESGASDTPVNRARKEILRECRQKGVSLEPGLFSLTV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
PTGGGKTLASMAFALEHALKHDKKRIIVVIPYTSIIEQTAAVYREVFGDDAVLEHHSNLD
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHCCCCC
PSRETPASRLATENWDAPIIVTTNVQFFESLFAARSSACRKLHNIVNSVVVLDEAQMLPT
CCCCCCHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCH
DFLQPIVSVIKMLSAHFRTSVVLCTATQPVLSGKVGTGKDILKGFDDGRVRELMADPEKL
HHHHHHHHHHHHHHHHHHHEEEEEECCCHHHCCCCCCCHHHHCCCCCHHHHHHHCCHHHH
FGIFQRVRVRMLGQADQRHEWAEIARRLCEPEQVLCIVNTRKDCRELHDLMPDGTVHLSA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEE
LMCPEHRSTVIAELKSKLVAGEPVRVVSTQLLEAGVDIDFPTVYRSFSGLDSIAQAAGRC
EECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
NREGKLEHGDVVVFNPPNPSPSGRLRKAEQAAQELFRTVPELAASLMPEAFRRYFMHYFS
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLNGFDTKGIMDLLASNDAARYFQIQFRTAARKFKLIDDTLQHGIIVRYRNGKANIDALI
CCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHH
DQLRFGGPNRKLMRQLQRYSVNVYDPDLKKLIENGLIEEVHGVWVQTSESAYDPVFGLNI
HHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCEEECCCCCCCCEEEEEE
DANLNFYW
CCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA