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The map label for this gene is 21673960

Identifier: 21673960

GI number: 21673960

Start: 1059862

End: 1060575

Strand: Reverse

Name: 21673960

Synonym: CT1134

Alternate gene names: NA

Gene position: 1060575-1059862 (Counterclockwise)

Preceding gene: 21673961

Following gene: 21673959

Centisome position: 49.22

GC content: 55.18

Gene sequence:

>714_bases
ATGGAGCATTGGAATAAAACATTCTGTCTTGAAGTCAAGGGCGATTACGCCTGCTTCACCCGGCCCGAAATGAAGGTCGA
GCGGGTGAGCTACGACGTCATTACCCCATCGGCGGCGCGGGGAATTTTCGAGGCGATTTTCTGGAAACCGGCCATTCGCT
GGCGGATTCGGAAGATTGAAGTATTGAATCCGATCAAGTGGATTTCGGTGCGGCGCAACGAGGTCGGCCAAACAGCAAGC
GAGCGGAGCGACGGCATTTTCATTGAAACGGCGCGTCAGCAACGAGCTGGCTTGTTTCTGCGGGATGTGGCCTACCGGCT
TCACGCCGAGCTTGAGTTCGTTCCGCCGTCGGAGCGGCCAGATGCAAAGCGCCCGGTGCCGGAATCATTGCAGGACGGCA
GGGAAACCTCAGAGCTGCGTAAGGATGAAAATCCGGGAAAATACTACGCCATCTTCGAGCGCCGGGCGCGGAAAGGGCAG
TGCTTCAACCAGCCCTATCTCGGCTGCCGCGAGTTCAGTTGCGAATTCAGGCTGGTCGATGATCTGGCAAATGAACCCCC
ACCGATCAGCGAAACCCGCAATTTGGGATTTATGCTTTACGACCTCGATTTTCAAAAGAACTTGAAAGAGCCACCTCCGG
CATTTTTCCCGGCGTGTCTGGAAAAAGGAGTTATCAAAGTGCCCGATTGGGAGAGCGAGGAGGTGAGAAAATGA

Upstream 100 bases:

>100_bases
GGGTGCAGACGTCGGAAAGCGCGTACGATCCGGTTTTCGGGTTGAATATCGACGCCAACCTGAATTTTTACTGGTAAGCT
CAACAAGGGAGAACAACGTT

Downstream 100 bases:

>100_bases
TTCTGCAAGCACTGTACGACTATTACCAGCGAAAAGCTGCCGATCCGGAAAGCGGTATTGCACCGGAAGGATTTGAATGG
AAGGAGATTCCATTCATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csd1 Family Protein; CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Dvulg Subtype; Cas5 Family CRISPR-Associated Protein; CRISPR-Associated Cas5d Family Protein; CRISPR-Associated RAMP Csd5d Family Protein; CRISPR-Associated D; CRISPR-Associated Protein Csd5d Family; CRISPR-Associated Protein; Crispr- Family

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MEHWNKTFCLEVKGDYACFTRPEMKVERVSYDVITPSAARGIFEAIFWKPAIRWRIRKIEVLNPIKWISVRRNEVGQTAS
ERSDGIFIETARQQRAGLFLRDVAYRLHAELEFVPPSERPDAKRPVPESLQDGRETSELRKDENPGKYYAIFERRARKGQ
CFNQPYLGCREFSCEFRLVDDLANEPPPISETRNLGFMLYDLDFQKNLKEPPPAFFPACLEKGVIKVPDWESEEVRK

Sequences:

>Translated_237_residues
MEHWNKTFCLEVKGDYACFTRPEMKVERVSYDVITPSAARGIFEAIFWKPAIRWRIRKIEVLNPIKWISVRRNEVGQTAS
ERSDGIFIETARQQRAGLFLRDVAYRLHAELEFVPPSERPDAKRPVPESLQDGRETSELRKDENPGKYYAIFERRARKGQ
CFNQPYLGCREFSCEFRLVDDLANEPPPISETRNLGFMLYDLDFQKNLKEPPPAFFPACLEKGVIKVPDWESEEVRK
>Mature_237_residues
MEHWNKTFCLEVKGDYACFTRPEMKVERVSYDVITPSAARGIFEAIFWKPAIRWRIRKIEVLNPIKWISVRRNEVGQTAS
ERSDGIFIETARQQRAGLFLRDVAYRLHAELEFVPPSERPDAKRPVPESLQDGRETSELRKDENPGKYYAIFERRARKGQ
CFNQPYLGCREFSCEFRLVDDLANEPPPISETRNLGFMLYDLDFQKNLKEPPPAFFPACLEKGVIKVPDWESEEVRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27750; Mature: 27750

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHWNKTFCLEVKGDYACFTRPEMKVERVSYDVITPSAARGIFEAIFWKPAIRWRIRKIE
CCCCCCEEEEEECCCEEEECCCCCEEEHEEEEEECCHHHHHHHHHHHHCHHHHHEEEEEE
VLNPIKWISVRRNEVGQTASERSDGIFIETARQQRAGLFLRDVAYRLHAELEFVPPSERP
CCCCHHHEEEHHHHHCCCHHHCCCCEEEEECHHHHHCHHHHHHHHHHHCEEEECCCCCCC
DAKRPVPESLQDGRETSELRKDENPGKYYAIFERRARKGQCFNQPYLGCREFSCEFRLVD
CCCCCCCHHHHCCHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEHH
DLANEPPPISETRNLGFMLYDLDFQKNLKEPPPAFFPACLEKGVIKVPDWESEEVRK
HHCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCHHHHHHHHCCEEECCCCCHHHHCC
>Mature Secondary Structure
MEHWNKTFCLEVKGDYACFTRPEMKVERVSYDVITPSAARGIFEAIFWKPAIRWRIRKIE
CCCCCCEEEEEECCCEEEECCCCCEEEHEEEEEECCHHHHHHHHHHHHCHHHHHEEEEEE
VLNPIKWISVRRNEVGQTASERSDGIFIETARQQRAGLFLRDVAYRLHAELEFVPPSERP
CCCCHHHEEEHHHHHCCCHHHCCCCEEEEECHHHHHCHHHHHHHHHHHCEEEECCCCCCC
DAKRPVPESLQDGRETSELRKDENPGKYYAIFERRARKGQCFNQPYLGCREFSCEFRLVD
CCCCCCCHHHHCCHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEHH
DLANEPPPISETRNLGFMLYDLDFQKNLKEPPPAFFPACLEKGVIKVPDWESEEVRK
HHCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCHHHHHHHHCCEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA