| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673947
Identifier: 21673947
GI number: 21673947
Start: 1051371
End: 1051640
Strand: Direct
Name: 21673947
Synonym: CT1121
Alternate gene names: NA
Gene position: 1051371-1051640 (Clockwise)
Preceding gene: 21673946
Following gene: 21673962
Centisome position: 48.79
GC content: 48.89
Gene sequence:
>270_bases GTGAGCAACAGAAATCTAACAACGGATCCCCGATGGAAAAGTATATTAAGACCGGCAACCACTTGTAACCATCAAAACAT CTCAGACATGGCCATGACCGTCGAAATCAGGGACAACAAGCTCTGCATCGAAATCGACCTCGAAAAACCGACCCCCTCGT CATCCGGCAAAACTCTCGTTGTCGCCAGCACTCACGGCAATGCCGTCACCGACGTCATGATCGAAGGAAAACCTGTAACG ATCGGTCTGAACGCCTACATCAAAAAGTAA
Upstream 100 bases:
>100_bases ATCGGCACGCGCGGTATCGTTTCCCGGATAAACGACTTGGCCGATCAACCGGACGCGAAAGAGACCTTGAAGATTTAAAG CTGCCTGACCTTGGGGATTC
Downstream 100 bases:
>100_bases GACGAACTGGCAAGACGGTGCCGCCATCCCGCGCGGTGCACGTCTGCTTGCCGGACAATTTTTCGCCGAGCCTGAGCTGT TGTTTTTTCAGGGTTTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSNRNLTTDPRWKSILRPATTCNHQNISDMAMTVEIRDNKLCIEIDLEKPTPSSSGKTLVVASTHGNAVTDVMIEGKPVT IGLNAYIKK
Sequences:
>Translated_89_residues MSNRNLTTDPRWKSILRPATTCNHQNISDMAMTVEIRDNKLCIEIDLEKPTPSSSGKTLVVASTHGNAVTDVMIEGKPVT IGLNAYIKK >Mature_88_residues SNRNLTTDPRWKSILRPATTCNHQNISDMAMTVEIRDNKLCIEIDLEKPTPSSSGKTLVVASTHGNAVTDVMIEGKPVTI GLNAYIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9782; Mature: 9651
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRNLTTDPRWKSILRPATTCNHQNISDMAMTVEIRDNKLCIEIDLEKPTPSSSGKTLV CCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCEEE VASTHGNAVTDVMIEGKPVTIGLNAYIKK EEECCCCEEEEEEECCCCEEEEEEEEEEC >Mature Secondary Structure SNRNLTTDPRWKSILRPATTCNHQNISDMAMTVEIRDNKLCIEIDLEKPTPSSSGKTLV CCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCEEE VASTHGNAVTDVMIEGKPVTIGLNAYIKK EEECCCCEEEEEEECCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA