| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673888
Identifier: 21673888
GI number: 21673888
Start: 999131
End: 999526
Strand: Reverse
Name: 21673888
Synonym: CT1062
Alternate gene names: NA
Gene position: 999526-999131 (Counterclockwise)
Preceding gene: 21673891
Following gene: 21673887
Centisome position: 46.38
GC content: 54.55
Gene sequence:
>396_bases ATGCTCAATACCTTTCTGGAAAGCCTCCTGTCGCGGTTGAAAAGCGCTTTCGATCTTGAACATCCTGGCAGCCTGCCGGG TGAAGTCGTCATCGTGCTGATCACCATATCTTTCATGCTGACATTCTTTTACCTGCTCTGGCGAATCGTTTGGTTTTCTT GGCTTTTATACGGCTTCTCACTCGCTTACCGGAACATCCGGTACATGGGCGTCTCCGTACAGAGCCGCGAAAGAAGCCGC GCTTTTGGGATTCGTCAGAACGGCAAGCTGGCCGGCTATGGCCTTATAGGCCTCTGCCGCAGCGGCTTCAAGATTGGCCC GCTTTTCGCCGCACCCCTGAGCTTGCCGAAACGCTTTTCAGCGCGCTCGAAAGCCCGATTCCTGAAGGCTCACTGA
Upstream 100 bases:
>100_bases ACCGGCAATGCAATCAATGCAATGTGTTGTGGATTTTTCTTGTCTCCGGCGTTGTTTTTGCAGAGTGCGACTCAATGCTT GAAACAATGGACTCATCTCC
Downstream 100 bases:
>100_bases TTTTTCTTGACATTCCGAAGGTCAACCCTGCAGCGCTTGAACTGGTTCAACGGCACAGGATGAACATGGTTTTCGAGACT GCCCGCATTACAAGGGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLNTFLESLLSRLKSAFDLEHPGSLPGEVVIVLITISFMLTFFYLLWRIVWFSWLLYGFSLAYRNIRYMGVSVQSRERSR AFGIRQNGKLAGYGLIGLCRSGFKIGPLFAAPLSLPKRFSARSKARFLKAH
Sequences:
>Translated_131_residues MLNTFLESLLSRLKSAFDLEHPGSLPGEVVIVLITISFMLTFFYLLWRIVWFSWLLYGFSLAYRNIRYMGVSVQSRERSR AFGIRQNGKLAGYGLIGLCRSGFKIGPLFAAPLSLPKRFSARSKARFLKAH >Mature_131_residues MLNTFLESLLSRLKSAFDLEHPGSLPGEVVIVLITISFMLTFFYLLWRIVWFSWLLYGFSLAYRNIRYMGVSVQSRERSR AFGIRQNGKLAGYGLIGLCRSGFKIGPLFAAPLSLPKRFSARSKARFLKAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14955; Mature: 14955
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTFLESLLSRLKSAFDLEHPGSLPGEVVIVLITISFMLTFFYLLWRIVWFSWLLYGFS CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYRNIRYMGVSVQSRERSRAFGIRQNGKLAGYGLIGLCRSGFKIGPLFAAPLSLPKRFS HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCHHHHH ARSKARFLKAH HHHHHHHHCCC >Mature Secondary Structure MLNTFLESLLSRLKSAFDLEHPGSLPGEVVIVLITISFMLTFFYLLWRIVWFSWLLYGFS CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYRNIRYMGVSVQSRERSRAFGIRQNGKLAGYGLIGLCRSGFKIGPLFAAPLSLPKRFS HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCHHHHH ARSKARFLKAH HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA