| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673877
Identifier: 21673877
GI number: 21673877
Start: 987376
End: 988050
Strand: Direct
Name: 21673877
Synonym: CT1051
Alternate gene names: NA
Gene position: 987376-988050 (Clockwise)
Preceding gene: 21673876
Following gene: 21673878
Centisome position: 45.82
GC content: 60.15
Gene sequence:
>675_bases ATGTCGGTAACCTTCTCATATCTGGCCGAGACGGACTATCCGGTCTTCACTCTCGGCGGTTCGACAGCTGATGCGGCAAG GCGGCTCGCTGCTTCGGGGTGCGCCTGCGCTCCAGTGCTTGACGGCGAGCGCTACCTTGGCATGGTCCACCTTTCGCGCC TGCTTGAAGGGCGGAAGGGGTGGCCGACAGTGAAGGAGAAGCTCGGCGAGGAGCTGCTCGAAACCGTCAGAAGCTACCGG CCTGGCGAGCAGCTTTTCGACAATCTCATCTCCGTGGCGGCGGCAAAGTGCAGCGTCGTGCCGCTTGCCGACGAGGATGG CCGGTATGAAGGGGTGGTTTCCCGCAAGCGAATTCTCGGCTTTCTCGCCGAGCGTATCCACTCCGGCGAGGGCGGCTTGA CGATGGAGATCGAGGTGCCGCCGACCGGGGCCAAGCTTTCCGAAATCATCGAGACCATCGAAAAGAACGACGCCTCGATC CTCAGCTTCACCTCGTGGACAACGGGCGAGGGACGAATCATCTTTTTCCGGGTCGCCACACACGACTTTTTCCGTCTGGT TAGAAACATGGAGAACTACGGCTACCTCATCCGCTACCACTCCGCGTTTCCCAACGCCGGTTACGACGAGCTTCGCGAGA AGGCGCTGGAGTTCATTCACTACATGGACATGTAG
Upstream 100 bases:
>100_bases CGACTCCAGTGCAGCGAAGATTCTCGAAAGCTGGTTCGCATCAGAATTCGAGGGGGGACGTCACCAGCGACGCGTCGATA AAATCGAGTTTTGCTGCTGA
Downstream 100 bases:
>100_bases AGCATGGCAGCCAGGCGACATCATGACAGTTACGGCATATGCACAATGAAGCGTTCAGTACCATCGCGGCCAGGGTCAGG GAGGCCGCGCACAACTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; XRE Family Transcriptional Regulator
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVRSYR PGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAERIHSGEGGLTMEIEVPPTGAKLSEIIETIEKNDASI LSFTSWTTGEGRIIFFRVATHDFFRLVRNMENYGYLIRYHSAFPNAGYDELREKALEFIHYMDM
Sequences:
>Translated_224_residues MSVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVRSYR PGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAERIHSGEGGLTMEIEVPPTGAKLSEIIETIEKNDASI LSFTSWTTGEGRIIFFRVATHDFFRLVRNMENYGYLIRYHSAFPNAGYDELREKALEFIHYMDM >Mature_223_residues SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVRSYRP GEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAERIHSGEGGLTMEIEVPPTGAKLSEIIETIEKNDASIL SFTSWTTGEGRIIFFRVATHDFFRLVRNMENYGYLIRYHSAFPNAGYDELREKALEFIHYMDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25032; Mature: 24901
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKG CCEEHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC WPTVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILG CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHH FLAERIHSGEGGLTMEIEVPPTGAKLSEIIETIEKNDASILSFTSWTTGEGRIIFFRVAT HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEHH HDFFRLVRNMENYGYLIRYHSAFPNAGYDELREKALEFIHYMDM HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKG CEEHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC WPTVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILG CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHH FLAERIHSGEGGLTMEIEVPPTGAKLSEIIETIEKNDASILSFTSWTTGEGRIIFFRVAT HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEHH HDFFRLVRNMENYGYLIRYHSAFPNAGYDELREKALEFIHYMDM HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA