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The map label for this gene is dnaQ [H]

Identifier: 21673865

GI number: 21673865

Start: 977601

End: 978299

Strand: Direct

Name: dnaQ [H]

Synonym: CT1039

Alternate gene names: 21673865

Gene position: 977601-978299 (Clockwise)

Preceding gene: 21673864

Following gene: 21673870

Centisome position: 45.37

GC content: 55.65

Gene sequence:

>699_bases
GTGCTTGAGCTTGCCCGCAAAATCCAGGCGTCGAGGCGCTGCCGCAAAGGTTTGCTGCCGGAAAACATTTGCCGGTACGT
CAGCCTGTTCGACCACCCGTTACAGCGCAATACACCGCTTGACGAGCTGCGTTTCGTCATTTTCGATACAGAAACCAGCG
GTTTCGATCTCGTCAAAGACCGAATACTTTCAATTGGCGCAGTGTCCATGAAGGGCTCGACCATCGACATCGCCGATTCG
TTCGAGGTGCTGCTTCGCCAGGAAGCTATTGGCGGCAAGGATGCGGTCAGCGTACATGGAATCCTGAAGCGGGATCTTAC
CCAGGGGATGGAGGAGGGCGAGGCGGTATGCCGTTTTCTCGATTATCTCGGCAACGGAGTGATTGTGGCGCATCACGCTG
ATTTTGATATCGCCATGGTTAACCGTGTGCTCTCGCAGCGGTACGGCATCAAGCTGTTGAACGAGGCGCTCGATACGGCC
AGTTTTGCCAAGCGGCTCGAAAAAGGGCCATATTATAATCTTGCTCACAAAAGCGGAGAGTATCGTCTCGACAATCTCTG
TGCCCGCTATGGCATCTGTCTCTACGATCGCCACACCTCAGCCGGCGACGCCTACCTCACCGCCCAGCTCTTCCAGCGCC
TCCTCGCCGTCGGGCGAAAAGCAGGCATTGACACGCTTGGGAAGTTATTGCTGAAGTGA

Upstream 100 bases:

>100_bases
CACCTTAACAAAATGCAGCGCCAGAAGCTGAGAGATCTTTTTACAACCATTGGCAAGGTTCAAAGCATGTTGAACCTCCG
TTACCAGCTCGACTACATTC

Downstream 100 bases:

>100_bases
GAACTTTCTGATAATCGAAATCGGTTTGGTCGCCTTCATCGAACGGTCGTGATAAATCAGGTTCCGATAGCGGTTTGGAT
AGAGAGGAATGAAATAGCTG

Product: DNA polymerase III, epsilon subunit

Products: NA

Alternate protein names: PolIII [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MLELARKIQASRRCRKGLLPENICRYVSLFDHPLQRNTPLDELRFVIFDTETSGFDLVKDRILSIGAVSMKGSTIDIADS
FEVLLRQEAIGGKDAVSVHGILKRDLTQGMEEGEAVCRFLDYLGNGVIVAHHADFDIAMVNRVLSQRYGIKLLNEALDTA
SFAKRLEKGPYYNLAHKSGEYRLDNLCARYGICLYDRHTSAGDAYLTAQLFQRLLAVGRKAGIDTLGKLLLK

Sequences:

>Translated_232_residues
MLELARKIQASRRCRKGLLPENICRYVSLFDHPLQRNTPLDELRFVIFDTETSGFDLVKDRILSIGAVSMKGSTIDIADS
FEVLLRQEAIGGKDAVSVHGILKRDLTQGMEEGEAVCRFLDYLGNGVIVAHHADFDIAMVNRVLSQRYGIKLLNEALDTA
SFAKRLEKGPYYNLAHKSGEYRLDNLCARYGICLYDRHTSAGDAYLTAQLFQRLLAVGRKAGIDTLGKLLLK
>Mature_232_residues
MLELARKIQASRRCRKGLLPENICRYVSLFDHPLQRNTPLDELRFVIFDTETSGFDLVKDRILSIGAVSMKGSTIDIADS
FEVLLRQEAIGGKDAVSVHGILKRDLTQGMEEGEAVCRFLDYLGNGVIVAHHADFDIAMVNRVLSQRYGIKLLNEALDTA
SFAKRLEKGPYYNLAHKSGEYRLDNLCARYGICLYDRHTSAGDAYLTAQLFQRLLAVGRKAGIDTLGKLLLK

Specific function: Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 exonuclease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011708
- InterPro:   IPR006054
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR023223
- InterPro:   IPR016027
- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR006308
- InterPro:   IPR012337 [H]

Pfam domain/function: PF07733 DNA_pol3_alpha; PF00929 Exonuc_X-T; PF02811 PHP [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 25966; Mature: 25966

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELARKIQASRRCRKGLLPENICRYVSLFDHPLQRNTPLDELRFVIFDTETSGFDLVKD
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCHHHHHH
RILSIGAVSMKGSTIDIADSFEVLLRQEAIGGKDAVSVHGILKRDLTQGMEEGEAVCRFL
HHHHHCCEEECCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLGNGVIVAHHADFDIAMVNRVLSQRYGIKLLNEALDTASFAKRLEKGPYYNLAHKSGE
HHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
YRLDNLCARYGICLYDRHTSAGDAYLTAQLFQRLLAVGRKAGIDTLGKLLLK
CHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MLELARKIQASRRCRKGLLPENICRYVSLFDHPLQRNTPLDELRFVIFDTETSGFDLVKD
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCHHHHHH
RILSIGAVSMKGSTIDIADSFEVLLRQEAIGGKDAVSVHGILKRDLTQGMEEGEAVCRFL
HHHHHCCEEECCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLGNGVIVAHHADFDIAMVNRVLSQRYGIKLLNEALDTASFAKRLEKGPYYNLAHKSGE
HHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
YRLDNLCARYGICLYDRHTSAGDAYLTAQLFQRLLAVGRKAGIDTLGKLLLK
CHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]