| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is bmpA [H]
Identifier: 21673862
GI number: 21673862
Start: 973417
End: 974460
Strand: Direct
Name: bmpA [H]
Synonym: CT1036
Alternate gene names: 21673862
Gene position: 973417-974460 (Clockwise)
Preceding gene: 21673861
Following gene: 21673863
Centisome position: 45.17
GC content: 53.07
Gene sequence:
>1044_bases ATGACTTACCGGAAATATTCATCATTCTTTTTCAGGCTTTCGTCTATTCTGACGATGTTCATGCTGCTTCTTACTGGATG CGCGGGGAAAAAAAAGGTCTCGGAAAGCAATCCAAACGCTTACAAAGTCGGCCTGGTGTTCGATGTCGGTGGTCGTGGAG ACAAGTCGTTCAACGATTTGGCTTATAACGGCCTTGAACAGGCCAAGAAGAAGCTCGGGATACAGTTCGATTACATCGAG CCATCAGGCGAGGGTGCCGACCGCGAGGCGGCGCTAAGGCAAATGGCCGCCGATCCCGATGTCAAGCTGATCATCGGCGT CGGTCTGCTTTTTACCGATGACATTACGGCTATCGCCAAAGAATTCCCCGACAAGAAGTTCGCCTGTATCGACTACAATC CACAGCCCGGTGCAGAGATTCCGTCGAACCTCTCCGGCATCGTGTTCGAGGAGAAAAAGGGGTCGTTCCTTGCCGGAGCG ATTGCGGCGCTCGAATCGAAAACCGGCATTATCGGCTTCATCGGCGGCATGGATTCCAACATCATCAGAAAATTCGAGTC CGGCTATATCGAGGGGGCCAAGTATGTCAGGCCGGACATCAAGCTCATCACCAACTTTATTGGCATGACCGGTAGCGCCT TCAACGATCCGGCCAAAGGCAAGGAAATTGCGCTTGGCCAGTACAGCCAGGGAGCGGATATTATCTACCAGGCGGCAGGA GCGAGCGGCATGGGCGTCATCGAGGCAGCGCGCGAATCGAAAAAACTCGTGATCTGCACCGATATGGGCCTGGAGTGGCC TGCTCCGGAGAACATGCTGACCAGCATCAACAAGGCGATCAACAAGGCTGTTCTGACCACAATCGACGAGGCGATGCATG GTAAGTTCGAGGGCGGAAAGCAGCGAGTGTTCGGTCTCGATAACCGTTATACCGATTACGTCTGGAACAGCGATACCGAA AAATTGATCGATCAGTCCGTGCACGAGCGTATCGAGTCGATCCGCAAGGATATTCTGGACGGGAAAATCAAGGTTCAGGA GTAA
Upstream 100 bases:
>100_bases CCATCCTTCTTGCTGCCCGTCGCTTGGGTCAACGTGATTAAGTGTTGAATTTATTATATTAAAAGTCAAAATTTTTGACG AATCAACCTCTGCTACAGGC
Downstream 100 bases:
>100_bases AAAGTCATCATAAGACGGATATTGTTCCGGAGATCGAATCCGGGGCGTCATTCGTCAAAGTACCAGCTCTTCAATACCAT AGTGCATTTGTGAGAAAGAA
Product: basic membrane protein A
Products: NA
Alternate protein names: Immunodominant antigen P39 [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTYRKYSSFFFRLSSILTMFMLLLTGCAGKKKVSESNPNAYKVGLVFDVGGRGDKSFNDLAYNGLEQAKKKLGIQFDYIE PSGEGADREAALRQMAADPDVKLIIGVGLLFTDDITAIAKEFPDKKFACIDYNPQPGAEIPSNLSGIVFEEKKGSFLAGA IAALESKTGIIGFIGGMDSNIIRKFESGYIEGAKYVRPDIKLITNFIGMTGSAFNDPAKGKEIALGQYSQGADIIYQAAG ASGMGVIEAARESKKLVICTDMGLEWPAPENMLTSINKAINKAVLTTIDEAMHGKFEGGKQRVFGLDNRYTDYVWNSDTE KLIDQSVHERIESIRKDILDGKIKVQE
Sequences:
>Translated_347_residues MTYRKYSSFFFRLSSILTMFMLLLTGCAGKKKVSESNPNAYKVGLVFDVGGRGDKSFNDLAYNGLEQAKKKLGIQFDYIE PSGEGADREAALRQMAADPDVKLIIGVGLLFTDDITAIAKEFPDKKFACIDYNPQPGAEIPSNLSGIVFEEKKGSFLAGA IAALESKTGIIGFIGGMDSNIIRKFESGYIEGAKYVRPDIKLITNFIGMTGSAFNDPAKGKEIALGQYSQGADIIYQAAG ASGMGVIEAARESKKLVICTDMGLEWPAPENMLTSINKAINKAVLTTIDEAMHGKFEGGKQRVFGLDNRYTDYVWNSDTE KLIDQSVHERIESIRKDILDGKIKVQE >Mature_346_residues TYRKYSSFFFRLSSILTMFMLLLTGCAGKKKVSESNPNAYKVGLVFDVGGRGDKSFNDLAYNGLEQAKKKLGIQFDYIEP SGEGADREAALRQMAADPDVKLIIGVGLLFTDDITAIAKEFPDKKFACIDYNPQPGAEIPSNLSGIVFEEKKGSFLAGAI AALESKTGIIGFIGGMDSNIIRKFESGYIEGAKYVRPDIKLITNFIGMTGSAFNDPAKGKEIALGQYSQGADIIYQAAGA SGMGVIEAARESKKLVICTDMGLEWPAPENMLTSINKAINKAVLTTIDEAMHGKFEGGKQRVFGLDNRYTDYVWNSDTEK LIDQSVHERIESIRKDILDGKIKVQE
Specific function: Not known; immunogenic protein [H]
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 37944; Mature: 37813
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYRKYSSFFFRLSSILTMFMLLLTGCAGKKKVSESNPNAYKVGLVFDVGGRGDKSFNDL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHH AYNGLEQAKKKLGIQFDYIEPSGEGADREAALRQMAADPDVKLIIGVGLLFTDDITAIAK HHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHCHHHHHHH EFPDKKFACIDYNPQPGAEIPSNLSGIVFEEKKGSFLAGAIAALESKTGIIGFIGGMDSN HCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCHH IIRKFESGYIEGAKYVRPDIKLITNFIGMTGSAFNDPAKGKEIALGQYSQGADIIYQAAG HHHHHHCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECC ASGMGVIEAARESKKLVICTDMGLEWPAPENMLTSINKAINKAVLTTIDEAMHGKFEGGK CCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QRVFGLDNRYTDYVWNSDTEKLIDQSVHERIESIRKDILDGKIKVQE EEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure TYRKYSSFFFRLSSILTMFMLLLTGCAGKKKVSESNPNAYKVGLVFDVGGRGDKSFNDL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHH AYNGLEQAKKKLGIQFDYIEPSGEGADREAALRQMAADPDVKLIIGVGLLFTDDITAIAK HHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHCHHHHHHH EFPDKKFACIDYNPQPGAEIPSNLSGIVFEEKKGSFLAGAIAALESKTGIIGFIGGMDSN HCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCHH IIRKFESGYIEGAKYVRPDIKLITNFIGMTGSAFNDPAKGKEIALGQYSQGADIIYQAAG HHHHHHCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECC ASGMGVIEAARESKKLVICTDMGLEWPAPENMLTSINKAINKAVLTTIDEAMHGKFEGGK CCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QRVFGLDNRYTDYVWNSDTEKLIDQSVHERIESIRKDILDGKIKVQE EEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9350727 [H]