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The map label for this gene is ybbC [H]

Identifier: 21673798

GI number: 21673798

Start: 915570

End: 916823

Strand: Direct

Name: ybbC [H]

Synonym: CT0970

Alternate gene names: 21673798

Gene position: 915570-916823 (Clockwise)

Preceding gene: 21673797

Following gene: 21673799

Centisome position: 42.49

GC content: 55.9

Gene sequence:

>1254_bases
ATGCCAAACTGCCGAAAACTTCAGGGTCATTTCCTCATGAAGCGAACAGCTCCTCTTTTTTTTCTGCTTTTTTTTCTCCT
GTTGGTAAAAACCTCCATTGCGCGAGCCGAGGCGTTCAGATACGGCCTCGATGTGCTCGATGCGCAGAAGTGTTTCCAAC
TTCAGGGCAAGCGAGTCGGCATGATTACCAATGCAGCAGCGGTTTCGCGCTCCGGCGAGCCGGGATATCGGGTTTTGCTT
CGGAACGGGGTTGATCTGAAATTTCTGATGGCTCCCGAGCATGGCTTCTCGCTCGATTACGAAGCTGGCAAGAAAGTGGA
CAATGCAGGGATTGGCGACAGTTTGAAAATCTGGTCGCTTTACGGTAACTCCCGGAAGCCTGATATTTCGCTTCTGAAAA
CCATCGATGTTCTCATTTTCGATCTTCAGGATGCGGGGGTGCGTTGTTACACCTACATTTCCACCATGAAGCTCGCGATG
GAGGCATGCAACGAAGCCGGGATCGTTTTCATGGTACTCGATCGCCCCAATCCCCTTGCGCCGATTCCGGTGAGCGGTTT
CGTGCTGGAGCCGCGCTTCGAGTCGTTCGTTGGCGCGGCGGAGCTTCCGTTCATCCACGGCATGAGCGTGGGAGAGATCG
CCGGATGGTTGCAGAAACGCCGTTTTCCGGGACTGTCGTTGCAGATTGTGCGGATGCAGGGATACCGGCGAGACAGGTTT
GCCGACGACCTTCCGGGCTTCTGTTTCCGTCCGCCGTCGCCGAACCTGCATGATTTCAAAACCCTGTTGCTCTATCCAGC
TACGGTCATGCTGGAGGGAACCGATGTCAGCGAAGGGCGTGGCACCGAGGCGCCGTTTCGAATGTTTGGCGCGCCATTCA
TCGACAGCAAAGCGCTCATCCGGGAACTCGAAACCTATCGCTTGCCCGGCGTCAAATTCTATAGGACGACCTTCACGCCC
GAAAGGAGCAAATTCTCCGGTGTCGAGTGCGAGGGAATCCGCCTGAAGGTGACCGATCGCGAGCGATTCGATCCGTTCAT
GACCTCCACGGCAATCCTGCTCTCGCTGCAGAAGCTCTGGCCGGAGCAGACCGGCCTGTATCGTCACGCCGCCTTTTTTG
ACCAGCTTGCAGGAACCGATCGTTACCGTCTTATGATTCAGCAGCAACGTCCGATCGCGGAAATTCTCGACGCTGTCCGA
GCGCAGGTGCGGGCATTCGATGCAGCTTCGCGGGATCGTTTCCTCTATCCCTGA

Upstream 100 bases:

>100_bases
TGTTGTGCGGTCTTTTTTTTGCCCGCAGCACTGCTTTTTGTTAAGGAGCGGGGTATATTGCCTTCGCGAAAGCTTCTTCG
TTATAGGGCTTGTAGGAAGG

Downstream 100 bases:

>100_bases
ATTTCCGTTTGACTGGCTGGTGTGGGATGCAGCATTCGCCTTTGATGCCCGATGGTGTGAGCAATATCTGCCAGAGCTGG
ATCGTGCGTGCCCTGAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MPNCRKLQGHFLMKRTAPLFFLLFFLLLVKTSIARAEAFRYGLDVLDAQKCFQLQGKRVGMITNAAAVSRSGEPGYRVLL
RNGVDLKFLMAPEHGFSLDYEAGKKVDNAGIGDSLKIWSLYGNSRKPDISLLKTIDVLIFDLQDAGVRCYTYISTMKLAM
EACNEAGIVFMVLDRPNPLAPIPVSGFVLEPRFESFVGAAELPFIHGMSVGEIAGWLQKRRFPGLSLQIVRMQGYRRDRF
ADDLPGFCFRPPSPNLHDFKTLLLYPATVMLEGTDVSEGRGTEAPFRMFGAPFIDSKALIRELETYRLPGVKFYRTTFTP
ERSKFSGVECEGIRLKVTDRERFDPFMTSTAILLSLQKLWPEQTGLYRHAAFFDQLAGTDRYRLMIQQQRPIAEILDAVR
AQVRAFDAASRDRFLYP

Sequences:

>Translated_417_residues
MPNCRKLQGHFLMKRTAPLFFLLFFLLLVKTSIARAEAFRYGLDVLDAQKCFQLQGKRVGMITNAAAVSRSGEPGYRVLL
RNGVDLKFLMAPEHGFSLDYEAGKKVDNAGIGDSLKIWSLYGNSRKPDISLLKTIDVLIFDLQDAGVRCYTYISTMKLAM
EACNEAGIVFMVLDRPNPLAPIPVSGFVLEPRFESFVGAAELPFIHGMSVGEIAGWLQKRRFPGLSLQIVRMQGYRRDRF
ADDLPGFCFRPPSPNLHDFKTLLLYPATVMLEGTDVSEGRGTEAPFRMFGAPFIDSKALIRELETYRLPGVKFYRTTFTP
ERSKFSGVECEGIRLKVTDRERFDPFMTSTAILLSLQKLWPEQTGLYRHAAFFDQLAGTDRYRLMIQQQRPIAEILDAVR
AQVRAFDAASRDRFLYP
>Mature_416_residues
PNCRKLQGHFLMKRTAPLFFLLFFLLLVKTSIARAEAFRYGLDVLDAQKCFQLQGKRVGMITNAAAVSRSGEPGYRVLLR
NGVDLKFLMAPEHGFSLDYEAGKKVDNAGIGDSLKIWSLYGNSRKPDISLLKTIDVLIFDLQDAGVRCYTYISTMKLAME
ACNEAGIVFMVLDRPNPLAPIPVSGFVLEPRFESFVGAAELPFIHGMSVGEIAGWLQKRRFPGLSLQIVRMQGYRRDRFA
DDLPGFCFRPPSPNLHDFKTLLLYPATVMLEGTDVSEGRGTEAPFRMFGAPFIDSKALIRELETYRLPGVKFYRTTFTPE
RSKFSGVECEGIRLKVTDRERFDPFMTSTAILLSLQKLWPEQTGLYRHAAFFDQLAGTDRYRLMIQQQRPIAEILDAVRA
QVRAFDAASRDRFLYP

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 47236; Mature: 47104

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNCRKLQGHFLMKRTAPLFFLLFFLLLVKTSIARAEAFRYGLDVLDAQKCFQLQGKRVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEE
MITNAAAVSRSGEPGYRVLLRNGVDLKFLMAPEHGFSLDYEAGKKVDNAGIGDSLKIWSL
EEECHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
YGNSRKPDISLLKTIDVLIFDLQDAGVRCYTYISTMKLAMEACNEAGIVFMVLDRPNPLA
ECCCCCCCHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PIPVSGFVLEPRFESFVGAAELPFIHGMSVGEIAGWLQKRRFPGLSLQIVRMQGYRRDRF
CCCCCCEEECCCHHHHCCCCCCCEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
ADDLPGFCFRPPSPNLHDFKTLLLYPATVMLEGTDVSEGRGTEAPFRMFGAPFIDSKALI
CCCCCCCEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHH
RELETYRLPGVKFYRTTFTPERSKFSGVECEGIRLKVTDRERFDPFMTSTAILLSLQKLW
HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHC
PEQTGLYRHAAFFDQLAGTDRYRLMIQQQRPIAEILDAVRAQVRAFDAASRDRFLYP
CHHCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PNCRKLQGHFLMKRTAPLFFLLFFLLLVKTSIARAEAFRYGLDVLDAQKCFQLQGKRVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEE
MITNAAAVSRSGEPGYRVLLRNGVDLKFLMAPEHGFSLDYEAGKKVDNAGIGDSLKIWSL
EEECHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
YGNSRKPDISLLKTIDVLIFDLQDAGVRCYTYISTMKLAMEACNEAGIVFMVLDRPNPLA
ECCCCCCCHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PIPVSGFVLEPRFESFVGAAELPFIHGMSVGEIAGWLQKRRFPGLSLQIVRMQGYRRDRF
CCCCCCEEECCCHHHHCCCCCCCEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
ADDLPGFCFRPPSPNLHDFKTLLLYPATVMLEGTDVSEGRGTEAPFRMFGAPFIDSKALI
CCCCCCCEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHH
RELETYRLPGVKFYRTTFTPERSKFSGVECEGIRLKVTDRERFDPFMTSTAILLSLQKLW
HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHC
PEQTGLYRHAAFFDQLAGTDRYRLMIQQQRPIAEILDAVRAQVRAFDAASRDRFLYP
CHHCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]