| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673772
Identifier: 21673772
GI number: 21673772
Start: 892531
End: 893322
Strand: Direct
Name: 21673772
Synonym: CT0944
Alternate gene names: NA
Gene position: 892531-893322 (Clockwise)
Preceding gene: 21673771
Following gene: 21673773
Centisome position: 41.42
GC content: 60.1
Gene sequence:
>792_bases ATGAAGAAGTACCCGTTCAGGCTTGGCACCTCGTCTTATATCATCCCGGACGACATTCTGCCCAACGTGCGCTATCTGGC GGACAAGGTCGAAGACATCGAGCTGGCGCTCTTCGAGTCCGACGAGTTCAGCAACCTGCCGTCGCCGGAGGTGATCGCGG AGCTGGTCGCGCTGGCTGGAGAGCATGGTCTGACCTACTCGGTGCACCTGCCGCTCGACGTCTATCTCGGCAGCCCTTTT CGGGATGAGCGGGAGCGCTCGGTGGGCAAGTGCCGCCGGATCATCGACCTTACCGAAGCGCTGCCGAAGTCGGCCTTCGT GATGCACTTCGAGGCGGGCAAGGGGGTGGACATCAACGCTTTTTCCGACGAAGAACGGCAGATTTTCGTGGAGAGTCTCG GCGACTCCGCGAGAATGTTGCTCGAGGGCTGCGGCGAACCGGTCTCGATGTTCTGCGCCGAAAACCTGAACTACCCCTTC GAGATCGTCTGGCCGGTGGTCGAACAATTCGGTTTTTCGGTGGCGCTCGACGTGGGCCATCTCGAATACTACGGTTTTCC GACCGCCGATTATCTTGACCGCTACCTCTCCCGAGCAAAGGTGCTGCACATGCACGGCACGACGGGGGGGCGCGATCACA ACTCACTGGCCTGCATGCGCCCCGAAGCGCTCGATCTGGTGGTCGAAGCGCTGCGCAAGGTGGAGGGCGAGCCAAAGGTG TTCACGCTGGAGATTTTCTCGGAAGCAGATTTTTTGTCGTCAGTCGAGACGCTGGAGCGGTTTTCGTCATGA
Upstream 100 bases:
>100_bases TGTCGGACAAACTCCGCAAATCCGGAGCGACGGAGTGGAAAGGAATTCAGGAATTGACGGCGATGCTCAACCGGGCGTGG CCGGAATCGCAACATTGAAG
Downstream 100 bases:
>100_bases CTCTTCAATCGCATAATTATTGCACCTATGCCTGAAGTAATCTATGTGACCGGCGGAGCCCGGAGTGGCAAGAGCTGCTA TGCGCTGAAGCTGGCCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKKYPFRLGTSSYIIPDDILPNVRYLADKVEDIELALFESDEFSNLPSPEVIAELVALAGEHGLTYSVHLPLDVYLGSPF RDERERSVGKCRRIIDLTEALPKSAFVMHFEAGKGVDINAFSDEERQIFVESLGDSARMLLEGCGEPVSMFCAENLNYPF EIVWPVVEQFGFSVALDVGHLEYYGFPTADYLDRYLSRAKVLHMHGTTGGRDHNSLACMRPEALDLVVEALRKVEGEPKV FTLEIFSEADFLSSVETLERFSS
Sequences:
>Translated_263_residues MKKYPFRLGTSSYIIPDDILPNVRYLADKVEDIELALFESDEFSNLPSPEVIAELVALAGEHGLTYSVHLPLDVYLGSPF RDERERSVGKCRRIIDLTEALPKSAFVMHFEAGKGVDINAFSDEERQIFVESLGDSARMLLEGCGEPVSMFCAENLNYPF EIVWPVVEQFGFSVALDVGHLEYYGFPTADYLDRYLSRAKVLHMHGTTGGRDHNSLACMRPEALDLVVEALRKVEGEPKV FTLEIFSEADFLSSVETLERFSS >Mature_263_residues MKKYPFRLGTSSYIIPDDILPNVRYLADKVEDIELALFESDEFSNLPSPEVIAELVALAGEHGLTYSVHLPLDVYLGSPF RDERERSVGKCRRIIDLTEALPKSAFVMHFEAGKGVDINAFSDEERQIFVESLGDSARMLLEGCGEPVSMFCAENLNYPF EIVWPVVEQFGFSVALDVGHLEYYGFPTADYLDRYLSRAKVLHMHGTTGGRDHNSLACMRPEALDLVVEALRKVEGEPKV FTLEIFSEADFLSSVETLERFSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29574; Mature: 29574
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYPFRLGTSSYIIPDDILPNVRYLADKVEDIELALFESDEFSNLPSPEVIAELVALAG CCCCCCEECCCCEECCHHHCCHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHC EHGLTYSVHLPLDVYLGSPFRDERERSVGKCRRIIDLTEALPKSAFVMHFEAGKGVDINA CCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECC FSDEERQIFVESLGDSARMLLEGCGEPVSMFCAENLNYPFEIVWPVVEQFGFSVALDVGH CCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECC LEYYGFPTADYLDRYLSRAKVLHMHGTTGGRDHNSLACMRPEALDLVVEALRKVEGEPKV EEEECCCCHHHHHHHHHHHEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCE FTLEIFSEADFLSSVETLERFSS EEEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKKYPFRLGTSSYIIPDDILPNVRYLADKVEDIELALFESDEFSNLPSPEVIAELVALAG CCCCCCEECCCCEECCHHHCCHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHC EHGLTYSVHLPLDVYLGSPFRDERERSVGKCRRIIDLTEALPKSAFVMHFEAGKGVDINA CCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECC FSDEERQIFVESLGDSARMLLEGCGEPVSMFCAENLNYPFEIVWPVVEQFGFSVALDVGH CCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECC LEYYGFPTADYLDRYLSRAKVLHMHGTTGGRDHNSLACMRPEALDLVVEALRKVEGEPKV EEEECCCCHHHHHHHHHHHEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCE FTLEIFSEADFLSSVETLERFSS EEEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA