| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673709
Identifier: 21673709
GI number: 21673709
Start: 836078
End: 836722
Strand: Reverse
Name: 21673709
Synonym: CT0881
Alternate gene names: NA
Gene position: 836722-836078 (Counterclockwise)
Preceding gene: 21673711
Following gene: 21673707
Centisome position: 38.83
GC content: 56.59
Gene sequence:
>645_bases ATGCGTGTGGCCGATGATCGAAATGAGCTTGAAGCGGTTCGAGAATTCGTAAACCGAACGCTCGATGGCGTAGCGCTTGC GGCTGCTGTAGGAGACCGAATAGTTGCGAACGCCGAATGGGCGGGCCAGGTAGCGCAGAATGTAGAAGAGCGCGCGGCTA AAAACCGAGCAGGGTTCGTTCAGAAACGGCGATGCCTGATGACCGTGAAAGAGAAGGAGTATTTGGCCTTCGTAGCGCAA CGCCAGCGATTCAGTCAGGGCGGAAGCGAGCTTGTAGTCGTGGTGATCGAGCAGACCGTGATCGTGGTTGCCGAACAACT TCCGGAAGAAGCCGTTGCGATTGAAAGCAAGCAGCAGCTCATACAGCCCGTCCCATGCAGCGGCGATGGCATTGAGATCG AATTTGAACAACTCCTCGATATCGCCGTTCAGCACAAGGCTGAATCCACCAGCAAGGTACCGCTGGCGCAGCACCGTTTC GAACAGCTGGGCGTTGTGCCGGAATTCATCGTTGCGCCCGCCATCCCCAAGATGCAGATCGCTGAACACCACCACCCGCG AGGCGCGATCAATCCCGATCGTTTCCGAGGTATGCAGAAGCCGTTCAAGATTGGAATAGCGCGTCATGTACCGCCAGCTG GATGA
Upstream 100 bases:
>100_bases CCTGTTGCCGCGCAGCATCAGCCGGAGCATAGCTGCGGCACAGCTCTTCGAGGCGGTAGTTCAGGTAATCAAGCTTGGAC ATCGATTCAAAAAGTGGACG
Downstream 100 bases:
>100_bases AAAGACCGGTTTGCTTCAGCAAAGGTAAGCCTTTTCACATCGGCACGTTGCAAAATTCCAGCAAACTCTCTTCATCCGAA CAGACTCCATCCGCCTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRVADDRNELEAVREFVNRTLDGVALAAAVGDRIVANAEWAGQVAQNVEERAAKNRAGFVQKRRCLMTVKEKEYLAFVAQ RQRFSQGGSELVVVVIEQTVIVVAEQLPEEAVAIESKQQLIQPVPCSGDGIEIEFEQLLDIAVQHKAESTSKVPLAQHRF EQLGVVPEFIVAPAIPKMQIAEHHHPRGAINPDRFRGMQKPFKIGIARHVPPAG
Sequences:
>Translated_214_residues MRVADDRNELEAVREFVNRTLDGVALAAAVGDRIVANAEWAGQVAQNVEERAAKNRAGFVQKRRCLMTVKEKEYLAFVAQ RQRFSQGGSELVVVVIEQTVIVVAEQLPEEAVAIESKQQLIQPVPCSGDGIEIEFEQLLDIAVQHKAESTSKVPLAQHRF EQLGVVPEFIVAPAIPKMQIAEHHHPRGAINPDRFRGMQKPFKIGIARHVPPAG >Mature_214_residues MRVADDRNELEAVREFVNRTLDGVALAAAVGDRIVANAEWAGQVAQNVEERAAKNRAGFVQKRRCLMTVKEKEYLAFVAQ RQRFSQGGSELVVVVIEQTVIVVAEQLPEEAVAIESKQQLIQPVPCSGDGIEIEFEQLLDIAVQHKAESTSKVPLAQHRF EQLGVVPEFIVAPAIPKMQIAEHHHPRGAINPDRFRGMQKPFKIGIARHVPPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23680; Mature: 23680
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVADDRNELEAVREFVNRTLDGVALAAAVGDRIVANAEWAGQVAQNVEERAAKNRAGFV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHH QKRRCLMTVKEKEYLAFVAQRQRFSQGGSELVVVVIEQTVIVVAEQLPEEAVAIESKQQL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHH IQPVPCSGDGIEIEFEQLLDIAVQHKAESTSKVPLAQHRFEQLGVVPEFIVAPAIPKMQI HCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCHHH AEHHHPRGAINPDRFRGMQKPFKIGIARHVPPAG HHCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MRVADDRNELEAVREFVNRTLDGVALAAAVGDRIVANAEWAGQVAQNVEERAAKNRAGFV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHH QKRRCLMTVKEKEYLAFVAQRQRFSQGGSELVVVVIEQTVIVVAEQLPEEAVAIESKQQL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHH IQPVPCSGDGIEIEFEQLLDIAVQHKAESTSKVPLAQHRFEQLGVVPEFIVAPAIPKMQI HCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCHHH AEHHHPRGAINPDRFRGMQKPFKIGIARHVPPAG HHCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA