| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is yeiH [C]
Identifier: 21673674
GI number: 21673674
Start: 808520
End: 809596
Strand: Direct
Name: yeiH [C]
Synonym: CT0845
Alternate gene names: 21673674
Gene position: 808520-809596 (Clockwise)
Preceding gene: 21673673
Following gene: 21673676
Centisome position: 37.52
GC content: 55.8
Gene sequence:
>1077_bases TTGAAACATGTCGATACGGAAATTCCAACCGAGGAGCAGATTCACGAGGCTGAAAAATTTGGATTCCACGGCCAGGTTCA AGCGGCAAAAATCAGGTTTGACAGATACTTTCCCGGTGTTCTGGCATCGATAACCGTTGCGGCCGCGGCTACCTTTCTCT CTGATCACTACGGCGCGCCGACGATGCTCTTCGCGCTGCTCATTGGCATGGCGTTTCGTTTTCTCTCCGAAGATGAGAGC CGGGCGCTGGTCGGCATCCAGTTCGCTTCCACCACAGTGCTTCGCATTGGCGTTGCGCTGCTCGGTATGCGCATCACCCT CGGTCAGATCCAGTCGCTTGGCGTTAAGCCGGTTGTGATGGTCTTTTTCTCGGTACTGCTCACTATTTTGTTCGGTCTGG CGCTCTCCAAAATGATGGGGCGCGGGAAACGTTTCGGCGTACTGACCGGCGGCAGCGTTGGCATCTGCGGCGCTTCCGCA GCGCTGGCTATTGCCGCCGTTTTACCCCAGGACGAGTACAGCGAGCGCAATACCATTTTCACGGTCATCAGCATCACCGC GCTGAGCACGCTGGCTATGATCGCCTATCCGGTCGTCGCTCAATGGTTCGGGCTCGACCATCAGGCCGCGGGTATTTTTC TCGGTGGTACGATTCATGACGTAGCGCAGGTGGTCGGTGCCGGTTATTCCGTATCGGAGCAGACCGGTGACACGGCGACC GTTATCAAGCTGCTCAGGGTGTCCATGCTGGTGCCGGTCGTATTTATTCTTTCACTCATTTTTCATAAGAGAAACCAGAA AGACGGAAATGCGCCCAGGCGCACGCTCCTGCCGCCATTCATCATTTTCTTCGTGCTGTTTGTCGGAATCAACAGCCTCG GCGTTGTGCCTAAACCGGCCACTCAGTTCATCAACGATGTCTCCCGCTGGTGCCTGGTTACAGCCATTGGTGCACTCGGC ATGAAAACGTCGCTGAAATCGCTGTTCGAGGTTGGCTGGAAGCCGGTTTCGATCATGATCGCGGAGACGGTGTTTCTCGC TGTGCTTGTGCTCGGCTCGGTGGTCTGGATGTCATAA
Upstream 100 bases:
>100_bases TGGGCTCAGCATTCCGGGAATCAGTAACACACATTGACATTAAAGGAGGAGCCTGATGGGGAACAAGACGCACGACCATG ACGAGGTCATTGATAAATCG
Downstream 100 bases:
>100_bases CCGTGCCCGGCGGTGTGCCAGTTACTTGGTCAAAAGGCTATGGGTCGGCAGAAAAAGAATGCATGCTTTTTGGTACGTTT TTCTTGCTTGACATATGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKHVDTEIPTEEQIHEAEKFGFHGQVQAAKIRFDRYFPGVLASITVAAAATFLSDHYGAPTMLFALLIGMAFRFLSEDES RALVGIQFASTTVLRIGVALLGMRITLGQIQSLGVKPVVMVFFSVLLTILFGLALSKMMGRGKRFGVLTGGSVGICGASA ALAIAAVLPQDEYSERNTIFTVISITALSTLAMIAYPVVAQWFGLDHQAAGIFLGGTIHDVAQVVGAGYSVSEQTGDTAT VIKLLRVSMLVPVVFILSLIFHKRNQKDGNAPRRTLLPPFIIFFVLFVGINSLGVVPKPATQFINDVSRWCLVTAIGALG MKTSLKSLFEVGWKPVSIMIAETVFLAVLVLGSVVWMS
Sequences:
>Translated_358_residues MKHVDTEIPTEEQIHEAEKFGFHGQVQAAKIRFDRYFPGVLASITVAAAATFLSDHYGAPTMLFALLIGMAFRFLSEDES RALVGIQFASTTVLRIGVALLGMRITLGQIQSLGVKPVVMVFFSVLLTILFGLALSKMMGRGKRFGVLTGGSVGICGASA ALAIAAVLPQDEYSERNTIFTVISITALSTLAMIAYPVVAQWFGLDHQAAGIFLGGTIHDVAQVVGAGYSVSEQTGDTAT VIKLLRVSMLVPVVFILSLIFHKRNQKDGNAPRRTLLPPFIIFFVLFVGINSLGVVPKPATQFINDVSRWCLVTAIGALG MKTSLKSLFEVGWKPVSIMIAETVFLAVLVLGSVVWMS >Mature_358_residues MKHVDTEIPTEEQIHEAEKFGFHGQVQAAKIRFDRYFPGVLASITVAAAATFLSDHYGAPTMLFALLIGMAFRFLSEDES RALVGIQFASTTVLRIGVALLGMRITLGQIQSLGVKPVVMVFFSVLLTILFGLALSKMMGRGKRFGVLTGGSVGICGASA ALAIAAVLPQDEYSERNTIFTVISITALSTLAMIAYPVVAQWFGLDHQAAGIFLGGTIHDVAQVVGAGYSVSEQTGDTAT VIKLLRVSMLVPVVFILSLIFHKRNQKDGNAPRRTLLPPFIIFFVLFVGINSLGVVPKPATQFINDVSRWCLVTAIGALG MKTSLKSLFEVGWKPVSIMIAETVFLAVLVLGSVVWMS
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family
Homologues:
Organism=Escherichia coli, GI1788482, Length=273, Percent_Identity=30.03663003663, Blast_Score=118, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y845_CHLTE (Q8KE45)
Other databases:
- EMBL: AE006470 - RefSeq: NP_661739.1 - GeneID: 1007237 - GenomeReviews: AE006470_GR - KEGG: cte:CT0845 - NMPDR: fig|194439.1.peg.833 - TIGR: CT0845 - HOGENOM: HBG669767 - OMA: ISHEAGD - ProtClustDB: CLSK2303899 - BioCyc: CTEP194439:CT_0845-MONOMER - InterPro: IPR018383
Pfam domain/function: PF03601 Cons_hypoth698
EC number: NA
Molecular weight: Translated: 38511; Mature: 38511
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd7c1b90)-; HASH(0xd5351c8)-; HASH(0xbc76f54)-; HASH(0xc8e3588)-; HASH(0xd9dadb8)-; HASH(0xd8e8af0)-; HASH(0xd8ec3dc)-; HASH(0xd4e0cd4)-; HASH(0xce98de0)-; HASH(0xc323790)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHVDTEIPTEEQIHEAEKFGFHGQVQAAKIRFDRYFPGVLASITVAAAATFLSDHYGAP CCCCCCCCCCHHHHHHHHHCCCCCCEEHHHEEHHHHCHHHHHHHHHHHHHHHHHHCCCCH TMLFALLIGMAFRFLSEDESRALVGIQFASTTVLRIGVALLGMRITLGQIQSLGVKPVVM HHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VFFSVLLTILFGLALSKMMGRGKRFGVLTGGSVGICGASAALAIAAVLPQDEYSERNTIF HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEE TVISITALSTLAMIAYPVVAQWFGLDHQAAGIFLGGTIHDVAQVVGAGYSVSEQTGDTAT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCHHH VIKLLRVSMLVPVVFILSLIFHKRNQKDGNAPRRTLLPPFIIFFVLFVGINSLGVVPKPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCHH TQFINDVSRWCLVTAIGALGMKTSLKSLFEVGWKPVSIMIAETVFLAVLVLGSVVWMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MKHVDTEIPTEEQIHEAEKFGFHGQVQAAKIRFDRYFPGVLASITVAAAATFLSDHYGAP CCCCCCCCCCHHHHHHHHHCCCCCCEEHHHEEHHHHCHHHHHHHHHHHHHHHHHHCCCCH TMLFALLIGMAFRFLSEDESRALVGIQFASTTVLRIGVALLGMRITLGQIQSLGVKPVVM HHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VFFSVLLTILFGLALSKMMGRGKRFGVLTGGSVGICGASAALAIAAVLPQDEYSERNTIF HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEE TVISITALSTLAMIAYPVVAQWFGLDHQAAGIFLGGTIHDVAQVVGAGYSVSEQTGDTAT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCHHH VIKLLRVSMLVPVVFILSLIFHKRNQKDGNAPRRTLLPPFIIFFVLFVGINSLGVVPKPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCHH TQFINDVSRWCLVTAIGALGMKTSLKSLFEVGWKPVSIMIAETVFLAVLVLGSVVWMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12093901