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The map label for this gene is hupZ [H]

Identifier: 21673608

GI number: 21673608

Start: 752133

End: 752822

Strand: Direct

Name: hupZ [H]

Synonym: CT0778

Alternate gene names: 21673608

Gene position: 752133-752822 (Clockwise)

Preceding gene: 21673607

Following gene: 21673609

Centisome position: 34.9

GC content: 56.96

Gene sequence:

>690_bases
ATGGGACGGATTATTGAGGAAATCTATGTGTGGCGCCTGCCGGTCAGGCTCTACCACTGGGTCAACGCCTTCAGCATCGC
GGTACTGCTTGGCACTGGTCTGTATATTGCGTACCCCGTGTTGGCCGCACCGTCCGGTGAGGCGGTGTTTCACCACGGCA
TTGCGACCTGGCGGGGCGTGCACTTTGCGGTGGCCTTCGTGTTCATCGCCAACTTCCTGTTCCGGATGTACTACGCCCTG
ATGGCCCGGGACGACCAGTATGCCCGTTTCGGCGGTTTTCAGCCCTGGAAACCCTCGTGGTGGGGCAAGCCTTTCAAGGA
GCAGATGGCAGCGTACCTTTTCCTTCGCAAGGGTGAGCCGGACTACGTCGGCCATAACCCGGTGGCTGCGCTGACCCACT
TTCTGTTTATCTTCTGCGGTTCAGTGTTTATGATTGCCTCGGGACTTGCCATGTACGGAGAGAACAACCCCGGCGGCCTG
AGCGAAACGCTGTTTGGCTGGATGCTTCCACTTTTTGGCGGAAGCTGCAACTTGCGATTTGCTCACCACCTGATGGCTTG
GATTTTCCCGTTCTACATTCTGGTGCACCTGTACGCGGTGTTCCGCCACGACATCGTCGATCGCAGCAGCGTGACCTCTT
CGATCATCACTGGTTACAAGCACAAGGTTGAGAATGAAGCAGCGTTGTAA

Upstream 100 bases:

>100_bases
GTGCACTCGTTCGATCCTTGTCTTGCCTGTGCGTCGCACGTGTTTGACATGAATGGTAACGAGATTACGAAGGTAAGGAT
CGTTTAATACGGAGGTTATC

Downstream 100 bases:

>100_bases
TTGATGATCGAAAATGAAGCATTGATAACTGGGGCGGGCCGTGTGTCCGCCCTTTGGCTGTTCAGTAAACCGAAGCTCGA
ATGCTTTTTCCATAACTTTC

Product: nickel-dependent hydrogenase b-type cytochrome subunit

Products: oxidized ferredoxin; H2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MGRIIEEIYVWRLPVRLYHWVNAFSIAVLLGTGLYIAYPVLAAPSGEAVFHHGIATWRGVHFAVAFVFIANFLFRMYYAL
MARDDQYARFGGFQPWKPSWWGKPFKEQMAAYLFLRKGEPDYVGHNPVAALTHFLFIFCGSVFMIASGLAMYGENNPGGL
SETLFGWMLPLFGGSCNLRFAHHLMAWIFPFYILVHLYAVFRHDIVDRSSVTSSIITGYKHKVENEAAL

Sequences:

>Translated_229_residues
MGRIIEEIYVWRLPVRLYHWVNAFSIAVLLGTGLYIAYPVLAAPSGEAVFHHGIATWRGVHFAVAFVFIANFLFRMYYAL
MARDDQYARFGGFQPWKPSWWGKPFKEQMAAYLFLRKGEPDYVGHNPVAALTHFLFIFCGSVFMIASGLAMYGENNPGGL
SETLFGWMLPLFGGSCNLRFAHHLMAWIFPFYILVHLYAVFRHDIVDRSSVTSSIITGYKHKVENEAAL
>Mature_228_residues
GRIIEEIYVWRLPVRLYHWVNAFSIAVLLGTGLYIAYPVLAAPSGEAVFHHGIATWRGVHFAVAFVFIANFLFRMYYALM
ARDDQYARFGGFQPWKPSWWGKPFKEQMAAYLFLRKGEPDYVGHNPVAALTHFLFIFCGSVFMIASGLAMYGENNPGGLS
ETLFGWMLPLFGGSCNLRFAHHLMAWIFPFYILVHLYAVFRHDIVDRSSVTSSIITGYKHKVENEAAL

Specific function: Probable b-type cytochrome [H]

COG id: COG1969

COG function: function code C; Ni,Fe-hydrogenase I cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupC/hyaC/hydC family [H]

Homologues:

Organism=Escherichia coli, GI1787208, Length=227, Percent_Identity=33.0396475770925, Blast_Score=110, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174
- InterPro:   IPR000516 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 26131; Mature: 26000

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIIEEIYVWRLPVRLYHWVNAFSIAVLLGTGLYIAYPVLAAPSGEAVFHHGIATWRGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
HFAVAFVFIANFLFRMYYALMARDDQYARFGGFQPWKPSWWGKPFKEQMAAYLFLRKGEP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
DYVGHNPVAALTHFLFIFCGSVFMIASGLAMYGENNPGGLSETLFGWMLPLFGGSCNLRF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
AHHLMAWIFPFYILVHLYAVFRHDIVDRSSVTSSIITGYKHKVENEAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GRIIEEIYVWRLPVRLYHWVNAFSIAVLLGTGLYIAYPVLAAPSGEAVFHHGIATWRGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
HFAVAFVFIANFLFRMYYALMARDDQYARFGGFQPWKPSWWGKPFKEQMAAYLFLRKGEP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
DYVGHNPVAALTHFLFIFCGSVFMIASGLAMYGENNPGGLSETLFGWMLPLFGGSCNLRF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
AHHLMAWIFPFYILVHLYAVFRHDIVDRSSVTSSIITGYKHKVENEAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; 2 H+ [C]

Specific reaction: Reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7966281 [H]