| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is hisB
Identifier: 21673565
GI number: 21673565
Start: 715946
End: 716530
Strand: Reverse
Name: hisB
Synonym: CT0735
Alternate gene names: 21673565
Gene position: 716530-715946 (Counterclockwise)
Preceding gene: 21673566
Following gene: 21673558
Centisome position: 33.25
GC content: 57.26
Gene sequence:
>585_bases ATGACCCAGCGCATCGCATCTCACAGCCGCAAAACTGCTGAAACGGACATTTCCGCCACCGTCAATCTCGACGGTTCAGG AACGTCGGCCATCGAGACCGGCGTGGTTTTTCTCGATCACATGCTCACCAACTTCAGCCGCCACTCCGGCATCGACGTGC AGTTACGGTGCAGCGGCGATCTGGAAGTTGACGACCACCACACCGTAGAAGATGTAGCGCTGGTGCTCGGCAAAGCCATC GTGGACGCGCTTGGCGACAAAAAAGGTATCGGACGCTACGGCTGGGCGATCATCCCGATGGACGAAGCGCTGGCACAGTG CTCGATCGACCTCGGTGGGCGTAGCTATTGCGTCTTCAGGGCAGAATTTCAGCGCCCGGTGATCCAGGGGCTTTCAACCG AGATGGTAGAGCACTTCTTTGTGTCGCTCTCGCGAACGATGAACGCAAACCTGCACCTCGCGGTTCTGGAGGGCCGGAAT ACGCACCATATGATCGAGGCGCTCTTTAAGTCGCTGGCCTACGCGATGAAGCAGGCAGTGAAGGTCGAAAGCACAGAAAT CAAATCGACCAAAGGGGCAATCTGA
Upstream 100 bases:
>100_bases CGCTCGGAAGCTCCATCGTCCTGTCAATCATCCTGAGCCTCGTCATTGGCCTTATCAACAAATTTTTCAGATAGCATCAT TCATGTCAGAATCAACACCC
Downstream 100 bases:
>100_bases GATAAGAAGTACAACACAAATAAAAAAGGCTGCCCAGTATTTTCCCGAAGCAGCCTTTTTTATTCGATCAGTCAGATTTT TTACTTTGCAAAGGCGACCG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTQRIASHSRKTAETDISATVNLDGSGTSAIETGVVFLDHMLTNFSRHSGIDVQLRCSGDLEVDDHHTVEDVALVLGKAI VDALGDKKGIGRYGWAIIPMDEALAQCSIDLGGRSYCVFRAEFQRPVIQGLSTEMVEHFFVSLSRTMNANLHLAVLEGRN THHMIEALFKSLAYAMKQAVKVESTEIKSTKGAI
Sequences:
>Translated_194_residues MTQRIASHSRKTAETDISATVNLDGSGTSAIETGVVFLDHMLTNFSRHSGIDVQLRCSGDLEVDDHHTVEDVALVLGKAI VDALGDKKGIGRYGWAIIPMDEALAQCSIDLGGRSYCVFRAEFQRPVIQGLSTEMVEHFFVSLSRTMNANLHLAVLEGRN THHMIEALFKSLAYAMKQAVKVESTEIKSTKGAI >Mature_193_residues TQRIASHSRKTAETDISATVNLDGSGTSAIETGVVFLDHMLTNFSRHSGIDVQLRCSGDLEVDDHHTVEDVALVLGKAIV DALGDKKGIGRYGWAIIPMDEALAQCSIDLGGRSYCVFRAEFQRPVIQGLSTEMVEHFFVSLSRTMNANLHLAVLEGRNT HHMIEALFKSLAYAMKQAVKVESTEIKSTKGAI
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=191, Percent_Identity=48.1675392670157, Blast_Score=187, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6324776, Length=220, Percent_Identity=37.2727272727273, Blast_Score=145, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_CHLTE (Q8KEF4)
Other databases:
- EMBL: AE006470 - RefSeq: NP_661630.1 - ProteinModelPortal: Q8KEF4 - SMR: Q8KEF4 - GeneID: 1006367 - GenomeReviews: AE006470_GR - KEGG: cte:CT0735 - NMPDR: fig|194439.1.peg.724 - TIGR: CT0735 - HOGENOM: HBG289010 - OMA: FGWAIIP - ProtClustDB: PRK00951 - BioCyc: CTEP194439:CT_0735-MONOMER - BRENDA: 4.2.1.19 - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 21189; Mature: 21058
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRIASHSRKTAETDISATVNLDGSGTSAIETGVVFLDHMLTNFSRHSGIDVQLRCSGD CCCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC LEVDDHHTVEDVALVLGKAIVDALGDKKGIGRYGWAIIPMDEALAQCSIDLGGRSYCVFR CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEE AEFQRPVIQGLSTEMVEHFFVSLSRTMNANLHLAVLEGRNTHHMIEALFKSLAYAMKQAV HHHCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH KVESTEIKSTKGAI HHHHHHHCCCCCCC >Mature Secondary Structure TQRIASHSRKTAETDISATVNLDGSGTSAIETGVVFLDHMLTNFSRHSGIDVQLRCSGD CCCHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC LEVDDHHTVEDVALVLGKAIVDALGDKKGIGRYGWAIIPMDEALAQCSIDLGGRSYCVFR CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEE AEFQRPVIQGLSTEMVEHFFVSLSRTMNANLHLAVLEGRNTHHMIEALFKSLAYAMKQAV HHHCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH KVESTEIKSTKGAI HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901