| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is kefB [H]
Identifier: 21673546
GI number: 21673546
Start: 697543
End: 699402
Strand: Direct
Name: kefB [H]
Synonym: CT0716
Alternate gene names: 21673546
Gene position: 697543-699402 (Clockwise)
Preceding gene: 21673545
Following gene: 21673547
Centisome position: 32.37
GC content: 57.15
Gene sequence:
>1860_bases ATGATTCTTCTCTGTTTTCCCGGTTCTGAACAAGGTATTGGAATGCATCAGTTTGAATTTCTTGGACAACTGGTCCTGAT CGGGGCGCTTGCCATTGTCAATATTCTCGTGTTCCAGAAGATCCGGATTCCTCCGGTGATCGGCCTGATCTTCACGGGTA TCATGCTCGGGCCGACGGGGTTCCATGTTATCCGGAACAGCGGGCTGATTTCGACGCTTGCCGAAATGGGCGTCGTGCTG CTGCTTTTTACCATCGGGCTGGAGTTTTCGGCCGATGATCTGAAAAAACTCCGGAAGATCGTCCTGTTCGGCGGAACGGC GCAGATTCTCCTGACCGGTCTGGTGATCGCCATGTTTTCGTACTGGCTGATGGATGCAATCGGCAAGTCGGTTGGCAGCA AGGAGGCGCTCGTGCTTGGCTTTTCGTTTTCGGTTAGCAGTACCGCGCTGTGCCTGAAAATTCTCTCTGACCGGGGCGAA CTTGGTTTCGATCACGGCAAGATCGCCCTTGGCATCCTGATCTTTCAGGACATGGCCATTGTGCCGCTGATGTTCGGATT CAGCTTTCTGACCCGCGGCAGCTCGATGCCGCTCGAATCATCGTTTGAGGAGATCGCGCTCTTGCTGCTCTTCGCCATCG GCATGTTCGGCGGATTCCGGCTGCTGATGCCGAAAATCGTCCGGATCATCACCGAGCTGCACGCGGGCGAGGTGCTGGTG CTGGGCGCACTGGTGCTCTGCTTTGGCGCGGCATGGCTCGCCTCGCTCATCGGCCTTTCCCTTGCGCTCGGCGCGTTTAT GGCCGGAATGGTGATCGCCAGTACCGACGGCAGCCACCGCATCAGCCGCACCATCGATCCTTTCAGGGAGGCGATGACCA GCATCTTTTTCGTCTCGGTCGGTCTGTTGCTCGACGTGAACATGATCGAGCTGCCGTGGCTCATCGCTATCGCCCTCGTG GTGCTGGTGGTCAAAGGGTTGATCATGACCGGCATTTTGATGGCGCTTGGTTTTTCGTTGCGGGTCAGCCTCATGTCGGG CATGGTGCTGGCACAGATTGGCGAGTTTTCCTTTGTGCTCGCCGGTACAGCCAAAGATGCCGGGCTGCTTGACCAGCACA TGTTCCAGTCGATGCTGGCGGTCATTGTCGTTACCATGATCGTCACCCCGGCGCTGATCTCCGCCGCGCCGAAATTTGCT GCCCAGGTCGCGCCAGCGCTCGGCTTTATGCCACTCGCATCCAAACCAGAGCCGAAACAGCCAGCGCGCGCCGCTGCCGG GCCGATTGTCTGCCGGGGTGAAATTCACGCCGCCATTATCGGATTCGGCCTGATCGGCAGGAATATCGCCGCCGTGATGA ATGCCACAAACCTGAACTATACGGTGCTTGATACCGACCGCAAGACTGTCAAGACGATGCGCCGCCAGGGCGAGCCGCTT TTTTATGGTGACTGCACGGAGCGCAAGTCACTGTTGCGTATTGGCGTCGATCACTCCCGCGCCGTGGTGATCTGCATTCC GGAAATCGACGCGGCCATTCAGTGCATCCGCCTCGTGCGGGAGATCAATCCCGGCGCGTTCATCATTGTGCGTTCCCGTT CACTCGAATCGACGAACCGTTTTTACCGCGCCGGAGCCGATGCTGCCGTGACCGAGCTGTTCGAGACATCGATCCAGATG TTTTCCGAACTGCTCAAACACTTCAGGGTCGAACCTGAAACGATTCTCGCTCAACAGGAAATTATCAGGCGCGAGGGCGG CAACATTTTCCGTGAACTGGTAACTGAAACGGATGGTTCCGGCGACGATCCAGCTAAAAAATCTCAAAATGGCGCGGGCT TCGTCACTTCTGAAACGTGA
Upstream 100 bases:
>100_bases CAAAATATTTGAGGTGCATTTGCGCCTTTTCTCTTGGTATCTTACACTGAAGCAGACCTGACGCACCACCGCTTGTGCAT GGCGCGCATACTGAGTTGCA
Downstream 100 bases:
>100_bases TGGCAACATAGCGTGCAATCGTGATTTTTACATACATTGAACGGTAGTGTCCATCTGAACTTCTTTTGAAAAGTCATGGA TAACGTGCCGGAACCATCGT
Product: glutathione-regulated potassium-efflux system protein KefC, putative
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MILLCFPGSEQGIGMHQFEFLGQLVLIGALAIVNILVFQKIRIPPVIGLIFTGIMLGPTGFHVIRNSGLISTLAEMGVVL LLFTIGLEFSADDLKKLRKIVLFGGTAQILLTGLVIAMFSYWLMDAIGKSVGSKEALVLGFSFSVSSTALCLKILSDRGE LGFDHGKIALGILIFQDMAIVPLMFGFSFLTRGSSMPLESSFEEIALLLLFAIGMFGGFRLLMPKIVRIITELHAGEVLV LGALVLCFGAAWLASLIGLSLALGAFMAGMVIASTDGSHRISRTIDPFREAMTSIFFVSVGLLLDVNMIELPWLIAIALV VLVVKGLIMTGILMALGFSLRVSLMSGMVLAQIGEFSFVLAGTAKDAGLLDQHMFQSMLAVIVVTMIVTPALISAAPKFA AQVAPALGFMPLASKPEPKQPARAAAGPIVCRGEIHAAIIGFGLIGRNIAAVMNATNLNYTVLDTDRKTVKTMRRQGEPL FYGDCTERKSLLRIGVDHSRAVVICIPEIDAAIQCIRLVREINPGAFIIVRSRSLESTNRFYRAGADAAVTELFETSIQM FSELLKHFRVEPETILAQQEIIRREGGNIFRELVTETDGSGDDPAKKSQNGAGFVTSET
Sequences:
>Translated_619_residues MILLCFPGSEQGIGMHQFEFLGQLVLIGALAIVNILVFQKIRIPPVIGLIFTGIMLGPTGFHVIRNSGLISTLAEMGVVL LLFTIGLEFSADDLKKLRKIVLFGGTAQILLTGLVIAMFSYWLMDAIGKSVGSKEALVLGFSFSVSSTALCLKILSDRGE LGFDHGKIALGILIFQDMAIVPLMFGFSFLTRGSSMPLESSFEEIALLLLFAIGMFGGFRLLMPKIVRIITELHAGEVLV LGALVLCFGAAWLASLIGLSLALGAFMAGMVIASTDGSHRISRTIDPFREAMTSIFFVSVGLLLDVNMIELPWLIAIALV VLVVKGLIMTGILMALGFSLRVSLMSGMVLAQIGEFSFVLAGTAKDAGLLDQHMFQSMLAVIVVTMIVTPALISAAPKFA AQVAPALGFMPLASKPEPKQPARAAAGPIVCRGEIHAAIIGFGLIGRNIAAVMNATNLNYTVLDTDRKTVKTMRRQGEPL FYGDCTERKSLLRIGVDHSRAVVICIPEIDAAIQCIRLVREINPGAFIIVRSRSLESTNRFYRAGADAAVTELFETSIQM FSELLKHFRVEPETILAQQEIIRREGGNIFRELVTETDGSGDDPAKKSQNGAGFVTSET >Mature_619_residues MILLCFPGSEQGIGMHQFEFLGQLVLIGALAIVNILVFQKIRIPPVIGLIFTGIMLGPTGFHVIRNSGLISTLAEMGVVL LLFTIGLEFSADDLKKLRKIVLFGGTAQILLTGLVIAMFSYWLMDAIGKSVGSKEALVLGFSFSVSSTALCLKILSDRGE LGFDHGKIALGILIFQDMAIVPLMFGFSFLTRGSSMPLESSFEEIALLLLFAIGMFGGFRLLMPKIVRIITELHAGEVLV LGALVLCFGAAWLASLIGLSLALGAFMAGMVIASTDGSHRISRTIDPFREAMTSIFFVSVGLLLDVNMIELPWLIAIALV VLVVKGLIMTGILMALGFSLRVSLMSGMVLAQIGEFSFVLAGTAKDAGLLDQHMFQSMLAVIVVTMIVTPALISAAPKFA AQVAPALGFMPLASKPEPKQPARAAAGPIVCRGEIHAAIIGFGLIGRNIAAVMNATNLNYTVLDTDRKTVKTMRRQGEPL FYGDCTERKSLLRIGVDHSRAVVICIPEIDAAIQCIRLVREINPGAFIIVRSRSLESTNRFYRAGADAAVTELFETSIQM FSELLKHFRVEPETILAQQEIIRREGGNIFRELVTETDGSGDDPAKKSQNGAGFVTSET
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=412, Percent_Identity=28.8834951456311, Blast_Score=116, Evalue=8e-26, Organism=Escherichia coli, GI1789749, Length=579, Percent_Identity=27.2884283246978, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1786232, Length=590, Percent_Identity=25.9322033898305, Blast_Score=185, Evalue=8e-48, Organism=Escherichia coli, GI1786685, Length=565, Percent_Identity=28.4955752212389, Blast_Score=175, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 66660; Mature: 66660
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLCFPGSEQGIGMHQFEFLGQLVLIGALAIVNILVFQKIRIPPVIGLIFTGIMLGPTG CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC FHVIRNSGLISTLAEMGVVLLLFTIGLEFSADDLKKLRKIVLFGGTAQILLTGLVIAMFS HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YWLMDAIGKSVGSKEALVLGFSFSVSSTALCLKILSDRGELGFDHGKIALGILIFQDMAI HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH VPLMFGFSFLTRGSSMPLESSFEEIALLLLFAIGMFGGFRLLMPKIVRIITELHAGEVLV HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH LGALVLCFGAAWLASLIGLSLALGAFMAGMVIASTDGSHRISRTIDPFREAMTSIFFVSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHH GLLLDVNMIELPWLIAIALVVLVVKGLIMTGILMALGFSLRVSLMSGMVLAQIGEFSFVL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE AGTAKDAGLLDQHMFQSMLAVIVVTMIVTPALISAAPKFAAQVAPALGFMPLASKPEPKQ ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCC PARAAAGPIVCRGEIHAAIIGFGLIGRNIAAVMNATNLNYTVLDTDRKTVKTMRRQGEPL CHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCE FYGDCTERKSLLRIGVDHSRAVVICIPEIDAAIQCIRLVREINPGAFIIVRSRSLESTNR EECCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH FYRAGADAAVTELFETSIQMFSELLKHFRVEPETILAQQEIIRREGGNIFRELVTETDGS HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCC GDDPAKKSQNGAGFVTSET CCCCCCCCCCCCCEEECCC >Mature Secondary Structure MILLCFPGSEQGIGMHQFEFLGQLVLIGALAIVNILVFQKIRIPPVIGLIFTGIMLGPTG CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC FHVIRNSGLISTLAEMGVVLLLFTIGLEFSADDLKKLRKIVLFGGTAQILLTGLVIAMFS HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YWLMDAIGKSVGSKEALVLGFSFSVSSTALCLKILSDRGELGFDHGKIALGILIFQDMAI HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH VPLMFGFSFLTRGSSMPLESSFEEIALLLLFAIGMFGGFRLLMPKIVRIITELHAGEVLV HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH LGALVLCFGAAWLASLIGLSLALGAFMAGMVIASTDGSHRISRTIDPFREAMTSIFFVSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHH GLLLDVNMIELPWLIAIALVVLVVKGLIMTGILMALGFSLRVSLMSGMVLAQIGEFSFVL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE AGTAKDAGLLDQHMFQSMLAVIVVTMIVTPALISAAPKFAAQVAPALGFMPLASKPEPKQ ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCC PARAAAGPIVCRGEIHAAIIGFGLIGRNIAAVMNATNLNYTVLDTDRKTVKTMRRQGEPL CHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCE FYGDCTERKSLLRIGVDHSRAVVICIPEIDAAIQCIRLVREINPGAFIIVRSRSLESTNR EECCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH FYRAGADAAVTELFETSIQMFSELLKHFRVEPETILAQQEIIRREGGNIFRELVTETDGS HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCC GDDPAKKSQNGAGFVTSET CCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA