| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673505
Identifier: 21673505
GI number: 21673505
Start: 666126
End: 666341
Strand: Direct
Name: 21673505
Synonym: CT0674
Alternate gene names: NA
Gene position: 666126-666341 (Clockwise)
Preceding gene: 21673504
Following gene: 21673506
Centisome position: 30.91
GC content: 55.09
Gene sequence:
>216_bases ATGAACGAGATGGAAGACCGTTGGTTATCAATAACCGAGATTTGCAAGTACCTCGGGGTCAGCAACGACACCGTTTACAA GTGGATCGACAAGCATGGCATGCCCGCCCACCGCATGGGCCGCCTTTGGAAGTTCAAGAAGGATGAGGTTGACGAATGGG TGAAGGCCGGCGGCGCGGCGGAATCTTCAGATGCTGGGAAGAGCCGCAACCTATGA
Upstream 100 bases:
>100_bases TATTGATGAAGTTTTTTCACCGGGGAGAGGTGCGCCCAGTCCCTCCCGGTTCGCCTCTGGCGGACGTGGCAAACAACCAA AGCGCCCGTGGAGCAAGAGA
Downstream 100 bases:
>100_bases TTATAAGGATCGTTACGTATGGCAAGATCTGATAGTGACAAGAACGGCAATGGGGGCAACCTCGGCTTCGAGGCTGAACT GTTCAAAGCCGCCGACAAGC
Product: VrlI protein
Products: NA
Alternate protein names: Transcriptional Regulator; Prophage Regulatory Protein; Cytoplasmic Protein; Conserved Domain Protein; VrlI Protein; VrlI Like Protein
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MNEMEDRWLSITEICKYLGVSNDTVYKWIDKHGMPAHRMGRLWKFKKDEVDEWVKAGGAAESSDAGKSRNL
Sequences:
>Translated_71_residues MNEMEDRWLSITEICKYLGVSNDTVYKWIDKHGMPAHRMGRLWKFKKDEVDEWVKAGGAAESSDAGKSRNL >Mature_71_residues MNEMEDRWLSITEICKYLGVSNDTVYKWIDKHGMPAHRMGRLWKFKKDEVDEWVKAGGAAESSDAGKSRNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8217; Mature: 8217
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEMEDRWLSITEICKYLGVSNDTVYKWIDKHGMPAHRMGRLWKFKKDEVDEWVKAGGAA CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCC ESSDAGKSRNL CCCCCCCCCCC >Mature Secondary Structure MNEMEDRWLSITEICKYLGVSNDTVYKWIDKHGMPAHRMGRLWKFKKDEVDEWVKAGGAA CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCC ESSDAGKSRNL CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA