| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is nudG [H]
Identifier: 21673459
GI number: 21673459
Start: 626294
End: 626800
Strand: Reverse
Name: nudG [H]
Synonym: CT0625
Alternate gene names: 21673459
Gene position: 626800-626294 (Counterclockwise)
Preceding gene: 21673462
Following gene: 21673458
Centisome position: 29.09
GC content: 58.19
Gene sequence:
>507_bases TTGACACACCTCGCTGAACAGGCTCGCTTCATCATTGATTTTATCATAATTTTTTCAGCATTGACTACTTCATACCATAT CGGCAACGTCGTGTGTGCCATCATCGAGCGCGAGGGCCGGTTCCTGATAGCCCGAAGGCCCTTGGGCAAGCATCTTGCGC GGAAATGGGAGTTTCCGGGGAGCAAGGTGGAGACCGGCGAATCGGAAGCCGAAGCACTCGAACGGGAGCTGATAGAGGAG CTTGGCGTCCGCATGGAGATTGTCGAACGCCTCATGCCGGTCGAGCACTGCTACGCCGACCGGTCGCTCCGGCTGATTGC GTTTCACTGCCGTATCGCTGCTGGCGCTCCGAATGCCGGTGAGCACGAGGAGCTGCGATGGATCGACATCGGCGAGGCCG ACGACTACGATTTTCCGGAGGCCGATTTGCCCATTCTTGCCGAGTACCGGCAGAAAATTGCCGCATCTGTACAGTCGTTG CCCGGCAAGCGGCGCGGAACAGCGTGA
Upstream 100 bases:
>100_bases TATTGCCAAAAAATGGACGATGCCGCTATGCAACCGGGGGGCGGTCATCAATCAGTTTTCCATTACATTCGAGGGAAGGG TGACTCTATGAAAACGACCG
Downstream 100 bases:
>100_bases TCGCAACGGAGCATTTCGCTTGCTCTTGTTGTCTTTATGGTGACTTGCAGATACCTCATCACCCATCAATCAAATACCCC ATGCTGATCCTGAGTAAACT
Product: Nudix/MutT family protein
Products: CMP; diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTHLAEQARFIIDFIIIFSALTTSYHIGNVVCAIIEREGRFLIARRPLGKHLARKWEFPGSKVETGESEAEALERELIEE LGVRMEIVERLMPVEHCYADRSLRLIAFHCRIAAGAPNAGEHEELRWIDIGEADDYDFPEADLPILAEYRQKIAASVQSL PGKRRGTA
Sequences:
>Translated_168_residues MTHLAEQARFIIDFIIIFSALTTSYHIGNVVCAIIEREGRFLIARRPLGKHLARKWEFPGSKVETGESEAEALERELIEE LGVRMEIVERLMPVEHCYADRSLRLIAFHCRIAAGAPNAGEHEELRWIDIGEADDYDFPEADLPILAEYRQKIAASVQSL PGKRRGTA >Mature_167_residues THLAEQARFIIDFIIIFSALTTSYHIGNVVCAIIEREGRFLIARRPLGKHLARKWEFPGSKVETGESEAEALERELIEEL GVRMEIVERLMPVEHCYADRSLRLIAFHCRIAAGAPNAGEHEELRWIDIGEADDYDFPEADLPILAEYRQKIAASVQSLP GKRRGTA
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=121, Percent_Identity=40.495867768595, Blast_Score=81, Evalue=3e-17, Organism=Escherichia coli, GI1786288, Length=123, Percent_Identity=30.8943089430894, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 19028; Mature: 18897
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLAEQARFIIDFIIIFSALTTSYHIGNVVCAIIEREGRFLIARRPLGKHLARKWEFPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCHHHHHHHHCCCCC SKVETGESEAEALERELIEELGVRMEIVERLMPVEHCYADRSLRLIAFHCRIAAGAPNAG CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCC EHEELRWIDIGEADDYDFPEADLPILAEYRQKIAASVQSLPGKRRGTA CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure THLAEQARFIIDFIIIFSALTTSYHIGNVVCAIIEREGRFLIARRPLGKHLARKWEFPG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCHHHHHHHHCCCCC SKVETGESEAEALERELIEELGVRMEIVERLMPVEHCYADRSLRLIAFHCRIAAGAPNAG CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCC EHEELRWIDIGEADDYDFPEADLPILAEYRQKIAASVQSLPGKRRGTA CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; H2O [C]
Specific reaction: CTP + H2O = CMP + diphosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]