| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is ilvC
Identifier: 21673451
GI number: 21673451
Start: 617604
End: 618596
Strand: Reverse
Name: ilvC
Synonym: CT0616
Alternate gene names: 21673451
Gene position: 618596-617604 (Counterclockwise)
Preceding gene: 21673452
Following gene: 21673450
Centisome position: 28.71
GC content: 59.11
Gene sequence:
>993_bases ATGAATATCTATTACGAGCAGGATGCCGATCTTGCGGTACTGCAGAACAAGAATATCGCCATTCTCGGCTACGGCAGCCA GGGCCACGCTCATGCGCTGAACCTGAAGGACAGCGGCATGAACGTCTGCGTCGGCCTCAAGACCGACAGCGCCTCCTGCG CCAAGGCACGCGAAGCGGGCCTGAAGGTTGACACTGTGGCCGAAGCGGTCAAATGGGCCGATATCGTCATGATTCTCCTG CCGGATCAGACCCAGAAAAGCGTTTACGACAACGAAATCGCGCCGAACCTGAAATCGGGCGCGACGCTCGCTTTCGGCCA CGGCTTCAATATTCACTACAAGCAGATCGTGCCGCCGGCTGACGTGAACGTCATCATGATCGCGCCCAAAAGCCCCGGCC ACCTCGTTCGCCGCACCTACACCGAAGGCAACGGCGTGCCCTGCCTCATCGCGGTGCACCAGGACGCTACCGGCGACGCC AAGGCAATTGCGCTCGCATGGGCAAAAGGCATCGGCGGCACCAAGGCTGGCGTGATCGAGACCAGCTTCAAGGATGAAAC TGAAACCGACCTCTTCGGTGAACAGGCCGTCTTGTGCGGCGGTTCGGCTGAACTCATCAAGGCCGGATTCGAGACCCTCA CCGAGGCGGGCTATCCTGCCGAGCTGGCCTACTTCGAGTGCATGCACGAGCTGAAGCTCATCGTTGACCTTTACTACGAA GGCGGCCTGTCGCGCATGAACTACTCGGTCAGCGACACCGCCGAGTACGGCGGCATGACCCGCGGCCCGCGCGTCGTCAC TTCCGCCGCGAAAGCCGAGATGAAGAAGATTCTCGAAGAGATTCAGGACGGTCGCTTCGCAAAAGAGTTCATCGACGAAT GCAACTCCGGTTACAAGAAGATGAACGAGTTGCGTGAGAGCAACCGCAACCACCCCATCGAAGTCGTCGGCGCGAAGCTG CGCGGCATGATGAGCTGGCTGAAAAAGAAATAA
Upstream 100 bases:
>100_bases GGCATCCGTGAACTCGCCCGTTCCGGCGCGGTAGCCATCCATCGCGGCGAGAGCTGAAGTTTTTTATGTACGTCCAAAAC CAGTCAACACGAATATGTCA
Downstream 100 bases:
>100_bases GCGGGAGGATGATGTATAAAATTGTCTCTATCCCCGGCGACGGCATCGGCCCCGAAGTGGTAGCCGGTGCGCTCGACGTG CTGAACGCCGTCGCGAAAAA
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNIYYEQDADLAVLQNKNIAILGYGSQGHAHALNLKDSGMNVCVGLKTDSASCAKAREAGLKVDTVAEAVKWADIVMILL PDQTQKSVYDNEIAPNLKSGATLAFGHGFNIHYKQIVPPADVNVIMIAPKSPGHLVRRTYTEGNGVPCLIAVHQDATGDA KAIALAWAKGIGGTKAGVIETSFKDETETDLFGEQAVLCGGSAELIKAGFETLTEAGYPAELAYFECMHELKLIVDLYYE GGLSRMNYSVSDTAEYGGMTRGPRVVTSAAKAEMKKILEEIQDGRFAKEFIDECNSGYKKMNELRESNRNHPIEVVGAKL RGMMSWLKKK
Sequences:
>Translated_330_residues MNIYYEQDADLAVLQNKNIAILGYGSQGHAHALNLKDSGMNVCVGLKTDSASCAKAREAGLKVDTVAEAVKWADIVMILL PDQTQKSVYDNEIAPNLKSGATLAFGHGFNIHYKQIVPPADVNVIMIAPKSPGHLVRRTYTEGNGVPCLIAVHQDATGDA KAIALAWAKGIGGTKAGVIETSFKDETETDLFGEQAVLCGGSAELIKAGFETLTEAGYPAELAYFECMHELKLIVDLYYE GGLSRMNYSVSDTAEYGGMTRGPRVVTSAAKAEMKKILEEIQDGRFAKEFIDECNSGYKKMNELRESNRNHPIEVVGAKL RGMMSWLKKK >Mature_330_residues MNIYYEQDADLAVLQNKNIAILGYGSQGHAHALNLKDSGMNVCVGLKTDSASCAKAREAGLKVDTVAEAVKWADIVMILL PDQTQKSVYDNEIAPNLKSGATLAFGHGFNIHYKQIVPPADVNVIMIAPKSPGHLVRRTYTEGNGVPCLIAVHQDATGDA KAIALAWAKGIGGTKAGVIETSFKDETETDLFGEQAVLCGGSAELIKAGFETLTEAGYPAELAYFECMHELKLIVDLYYE GGLSRMNYSVSDTAEYGGMTRGPRVVTSAAKAEMKKILEEIQDGRFAKEFIDECNSGYKKMNELRESNRNHPIEVVGAKL RGMMSWLKKK
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=306, Percent_Identity=35.9477124183007, Blast_Score=150, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6323387, Length=330, Percent_Identity=33.6363636363636, Blast_Score=138, Evalue=1e-33,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_CHLTE (Q8KER7)
Other databases:
- EMBL: AE006470 - RefSeq: NP_661516.1 - ProteinModelPortal: Q8KER7 - SMR: Q8KER7 - GeneID: 1007141 - GenomeReviews: AE006470_GR - KEGG: cte:CT0616 - NMPDR: fig|194439.1.peg.610 - TIGR: CT0616 - HOGENOM: HBG286525 - OMA: MAYAKGI - ProtClustDB: PRK05479 - BioCyc: CTEP194439:CT_0616-MONOMER - BRENDA: 1.1.1.86 - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 35858; Mature: 35858
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: ACT_SITE 107-107
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYYEQDADLAVLQNKNIAILGYGSQGHAHALNLKDSGMNVCVGLKTDSASCAKAREAG CCEEECCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHCC LKVDTVAEAVKWADIVMILLPDQTQKSVYDNEIAPNLKSGATLAFGHGFNIHYKQIVPPA CCHHHHHHHHHHEEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCC DVNVIMIAPKSPGHLVRRTYTEGNGVPCLIAVHQDATGDAKAIALAWAKGIGGTKAGVIE CCCEEEECCCCCCHHHEEEECCCCCCEEEEEEECCCCCCHHEEEEEECCCCCCCCCCEEE TSFKDETETDLFGEQAVLCGGSAELIKAGFETLTEAGYPAELAYFECMHELKLIVDLYYE CCCCCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GGLSRMNYSVSDTAEYGGMTRGPRVVTSAAKAEMKKILEEIQDGRFAKEFIDECNSGYKK CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH MNELRESNRNHPIEVVGAKLRGMMSWLKKK HHHHHHCCCCCCEEEHHHHHHHHHHHHHCC >Mature Secondary Structure MNIYYEQDADLAVLQNKNIAILGYGSQGHAHALNLKDSGMNVCVGLKTDSASCAKAREAG CCEEECCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHCC LKVDTVAEAVKWADIVMILLPDQTQKSVYDNEIAPNLKSGATLAFGHGFNIHYKQIVPPA CCHHHHHHHHHHEEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCC DVNVIMIAPKSPGHLVRRTYTEGNGVPCLIAVHQDATGDAKAIALAWAKGIGGTKAGVIE CCCEEEECCCCCCHHHEEEECCCCCCEEEEEEECCCCCCHHEEEEEECCCCCCCCCCEEE TSFKDETETDLFGEQAVLCGGSAELIKAGFETLTEAGYPAELAYFECMHELKLIVDLYYE CCCCCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GGLSRMNYSVSDTAEYGGMTRGPRVVTSAAKAEMKKILEEIQDGRFAKEFIDECNSGYKK CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH MNELRESNRNHPIEVVGAKLRGMMSWLKKK HHHHHHCCCCCCEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901