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The map label for this gene is cspG [H]

Identifier: 21673445

GI number: 21673445

Start: 611646

End: 611939

Strand: Direct

Name: cspG [H]

Synonym: CT0610

Alternate gene names: 21673445

Gene position: 611646-611939 (Clockwise)

Preceding gene: 21673440

Following gene: 21673457

Centisome position: 28.38

GC content: 45.58

Gene sequence:

>294_bases
ATGGCTAAAAGTAAAGTCAAATGGTTTGATGGCAAAAAAGGGTACGGTTTTATTCTGAACCCTGATGGCGGGGAAGACAT
CTTTGTCCATTTTTCGTCGATCATCTCTGATCAGAGCTTCAAGGTCCTCAATCAGGATGCTGACGTGGAATATGATCTTG
ATAAGACACAGAAAGGTCTTCAGGCCAAAAATGTTCGTGAACTTTCTGTTTCCGCAGCTACCGTGGCTTCCGGCGTTGAG
AATCCAGCGGTAAGGCTTGGGGTTCAGGGCGAATTCAATTCCTTGCCTCAGTAA

Upstream 100 bases:

>100_bases
TAAAGCGAAAATATTATTGCGTTATATGACGCAATAATCTATATTAAACAATAAACTGATGTTTTTATTTTGTTAACATT
AACCATCGAATGTCGTCATC

Downstream 100 bases:

>100_bases
GCCGTTTCAGCTGCTGTCCTTCCACCTATTTTCCAACAATCTCTTTTTTTTGATCCAGCAGACCAAATGCAGAAACTACG
ATTTTGAGATCGTAATTCTT

Product: cold shock-like protein CspG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MAKSKVKWFDGKKGYGFILNPDGGEDIFVHFSSIISDQSFKVLNQDADVEYDLDKTQKGLQAKNVRELSVSAATVASGVE
NPAVRLGVQGEFNSLPQ

Sequences:

>Translated_97_residues
MAKSKVKWFDGKKGYGFILNPDGGEDIFVHFSSIISDQSFKVLNQDADVEYDLDKTQKGLQAKNVRELSVSAATVASGVE
NPAVRLGVQGEFNSLPQ
>Mature_96_residues
AKSKVKWFDGKKGYGFILNPDGGEDIFVHFSSIISDQSFKVLNQDADVEYDLDKTQKGLQAKNVRELSVSAATVASGVEN
PAVRLGVQGEFNSLPQ

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI2367114, Length=63, Percent_Identity=46.031746031746, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI1788126, Length=66, Percent_Identity=45.4545454545455, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1787107, Length=74, Percent_Identity=40.5405405405405, Blast_Score=60, Evalue=2e-11,
Organism=Escherichia coli, GI1786841, Length=66, Percent_Identity=45.4545454545455, Blast_Score=59, Evalue=6e-11,
Organism=Escherichia coli, GI1787834, Length=63, Percent_Identity=46.031746031746, Blast_Score=59, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 10578; Mature: 10447

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00352 COLD_SHOCK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSKVKWFDGKKGYGFILNPDGGEDIFVHFSSIISDQSFKVLNQDADVEYDLDKTQKGL
CCCCCCEEECCCCCCEEEECCCCCCEEEEEEHHHHCCCCEEEECCCCCCEECCCCCCCCC
QAKNVRELSVSAATVASGVENPAVRLGVQGEFNSLPQ
CCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
AKSKVKWFDGKKGYGFILNPDGGEDIFVHFSSIISDQSFKVLNQDADVEYDLDKTQKGL
CCCCCEEECCCCCCEEEECCCCCCEEEEEEHHHHCCCCEEEECCCCCCEECCCCCCCCC
QAKNVRELSVSAATVASGVENPAVRLGVQGEFNSLPQ
CCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10483731 [H]