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The map label for this gene is sun [H]

Identifier: 21673438

GI number: 21673438

Start: 604791

End: 606077

Strand: Reverse

Name: sun [H]

Synonym: CT0603

Alternate gene names: 21673438

Gene position: 606077-604791 (Counterclockwise)

Preceding gene: 21673441

Following gene: 21673437

Centisome position: 28.12

GC content: 64.02

Gene sequence:

>1287_bases
ATGACCGCACGTGAACTCGCCCTTCGTGTTTTGCTCGAACTCGACGGTATGCGCAAATCCGAAGAGCTGCTCAACCGGAT
GCACGAACACGCCGGCCTCGGCAAGAATGACCGTGCGCTGGCAAAAGAGCTGGTGGCTGGAACGCTGAAGTACCGGCTTC
AGTGCGATTTCATCATCGCGCGATTCTACCGGCACGACTACGCCAAAGCCGCCACCGTACTCAAGCACATCCTGCGCCTC
GGCGTCTATCAGCTTCTGCGCCTCGACCGTGTGCCAAAATCGGCGGCGGTCAACGAATCGGTCAAGCTCGCCCGCAAATT
CAAGGGCGACCATCTGGCCAGGCTGGTCAACGGTCTGTTGCGCAACATCTCGAAAGCGACCATCGATCTTGACGCATGGA
CGGCTGAGATGCCGGAGTCGAAACGCCTCTCGATTCTCTACTCCTTCCCGGAGTGGCTCGCCGCCCGCTGGCTCATGCGC
TACGGCCCCGACGCGACGCTCGCGATGCTCGCGCACGGCAATCTGCCGCCTGCTACCGGCTACCGAATCAACCGGCTCAA
GGCCAATCCCGAAACGCTGCTGGCGAGGCCCGAACTTTCGGACGCAAAACGAGTTGCGGACGCAGATGGACTCGATCGAT
TCTTCTTCTCCAAGCAGTTCGCCCTGCTCGAACCGCTGCTCAAGGAGGGACTCGTCAGCGTGCAGAATCCGGCGCAAGGG
CAGGCCTGCCTCATGGCCGCACCAGAGCCGGGCAGCACGGTGTTCGACATGTGCGCCGCGCCGGGGGGCAAATCGACCTT
CATGGCCGAACTGATGGAGAATCGCGGGCGCATCATCGCGCTCGACCGTACCCCCGCAAAAGTCGCGCGAATCGCCTCGA
ACGCATCGGCACTCGGCATCACCATCATCGAACCGCGCGAAGGCGACGCGCTCACTTTCGATCCGGGATGCGCGATGGAC
ACCATCCTGCTCGACGCGCCGTGCACCGGCACCGGCGTCTTGGGCCGCCGCGCCGAACTTCGCTGGCGGACGACGCCCGA
AAAGCTGCGGGAGCTTGCCGCGCTGCAAGCTGCGATGCTTGACCGCGCCGCCTCGCTGCTCCGGCCCGGCGGCGTGCTGC
TCTACGCCACCTGCTCGGTCGAGCCAGAGGAGAACGAGCTTCAGACCGAAGCGTTCCTGAAACGCCACCCGGAGTTCATC
GCCGAAGCGTCGCGACTGACGCTGCCCGGTTCGCACGAGGGCTTCGACGGCGGCTTCGCCGCACGGTTCCGCAAAACGGA
GGGGTAA

Upstream 100 bases:

>100_bases
AAAAAGAACGTTCAAGTTTCAGGAATCTACGACAGATGATACTATTTTACAAGACGCTGCTACCTGCTTTCAGTAAAAAC
AGTCGTCATCCTCCTTATCC

Downstream 100 bases:

>100_bases
AGATGCCAGAACGCGAGGAGCCGTGGCGGAAAACGCTCGAAACCTTCCTGAACTACCTGACCCTCGAACGCAATTTTTCG
GGCAACACGCGCGCCTCGTA

Product: Sun protein

Products: NA

Alternate protein names: rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MTARELALRVLLELDGMRKSEELLNRMHEHAGLGKNDRALAKELVAGTLKYRLQCDFIIARFYRHDYAKAATVLKHILRL
GVYQLLRLDRVPKSAAVNESVKLARKFKGDHLARLVNGLLRNISKATIDLDAWTAEMPESKRLSILYSFPEWLAARWLMR
YGPDATLAMLAHGNLPPATGYRINRLKANPETLLARPELSDAKRVADADGLDRFFFSKQFALLEPLLKEGLVSVQNPAQG
QACLMAAPEPGSTVFDMCAAPGGKSTFMAELMENRGRIIALDRTPAKVARIASNASALGITIIEPREGDALTFDPGCAMD
TILLDAPCTGTGVLGRRAELRWRTTPEKLRELAALQAAMLDRAASLLRPGGVLLYATCSVEPEENELQTEAFLKRHPEFI
AEASRLTLPGSHEGFDGGFAARFRKTEG

Sequences:

>Translated_428_residues
MTARELALRVLLELDGMRKSEELLNRMHEHAGLGKNDRALAKELVAGTLKYRLQCDFIIARFYRHDYAKAATVLKHILRL
GVYQLLRLDRVPKSAAVNESVKLARKFKGDHLARLVNGLLRNISKATIDLDAWTAEMPESKRLSILYSFPEWLAARWLMR
YGPDATLAMLAHGNLPPATGYRINRLKANPETLLARPELSDAKRVADADGLDRFFFSKQFALLEPLLKEGLVSVQNPAQG
QACLMAAPEPGSTVFDMCAAPGGKSTFMAELMENRGRIIALDRTPAKVARIASNASALGITIIEPREGDALTFDPGCAMD
TILLDAPCTGTGVLGRRAELRWRTTPEKLRELAALQAAMLDRAASLLRPGGVLLYATCSVEPEENELQTEAFLKRHPEFI
AEASRLTLPGSHEGFDGGFAARFRKTEG
>Mature_427_residues
TARELALRVLLELDGMRKSEELLNRMHEHAGLGKNDRALAKELVAGTLKYRLQCDFIIARFYRHDYAKAATVLKHILRLG
VYQLLRLDRVPKSAAVNESVKLARKFKGDHLARLVNGLLRNISKATIDLDAWTAEMPESKRLSILYSFPEWLAARWLMRY
GPDATLAMLAHGNLPPATGYRINRLKANPETLLARPELSDAKRVADADGLDRFFFSKQFALLEPLLKEGLVSVQNPAQGQ
ACLMAAPEPGSTVFDMCAAPGGKSTFMAELMENRGRIIALDRTPAKVARIASNASALGITIIEPREGDALTFDPGCAMDT
ILLDAPCTGTGVLGRRAELRWRTTPEKLRELAALQAAMLDRAASLLRPGGVLLYATCSVEPEENELQTEAFLKRHPEFIA
EASRLTLPGSHEGFDGGFAARFRKTEG

Specific function: Unknown

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI32698918, Length=166, Percent_Identity=36.7469879518072, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI76150625, Length=325, Percent_Identity=27.3846153846154, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI76150623, Length=325, Percent_Identity=27.3846153846154, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI8922322, Length=194, Percent_Identity=34.5360824742268, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI270288816, Length=194, Percent_Identity=34.5360824742268, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI270288818, Length=194, Percent_Identity=34.5360824742268, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI23199998, Length=194, Percent_Identity=34.5360824742268, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI301336155, Length=237, Percent_Identity=28.2700421940928, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI2367212, Length=408, Percent_Identity=32.3529411764706, Blast_Score=182, Evalue=5e-47,
Organism=Escherichia coli, GI87081985, Length=206, Percent_Identity=33.9805825242718, Blast_Score=100, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17536757, Length=161, Percent_Identity=35.4037267080745, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71998419, Length=174, Percent_Identity=33.9080459770115, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI115534021, Length=167, Percent_Identity=34.7305389221557, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI25143471, Length=162, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324268, Length=156, Percent_Identity=34.6153846153846, Blast_Score=94, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6319447, Length=176, Percent_Identity=30.1136363636364, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21356579, Length=183, Percent_Identity=30.6010928961749, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI22024126, Length=166, Percent_Identity=33.7349397590361, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24668781, Length=171, Percent_Identity=35.0877192982456, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21356513, Length=171, Percent_Identity=35.0877192982456, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 47216; Mature: 47085

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARELALRVLLELDGMRKSEELLNRMHEHAGLGKNDRALAKELVAGTLKYRLQCDFIIA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEHHHHHH
RFYRHDYAKAATVLKHILRLGVYQLLRLDRVPKSAAVNESVKLARKFKGDHLARLVNGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
RNISKATIDLDAWTAEMPESKRLSILYSFPEWLAARWLMRYGPDATLAMLAHGNLPPATG
HHHHHHEEEECHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
YRINRLKANPETLLARPELSDAKRVADADGLDRFFFSKQFALLEPLLKEGLVSVQNPAQG
CEEEEEECCHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCC
QACLMAAPEPGSTVFDMCAAPGGKSTFMAELMENRGRIIALDRTPAKVARIASNASALGI
CEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEE
TIIEPREGDALTFDPGCAMDTILLDAPCTGTGVLGRRAELRWRTTPEKLRELAALQAAML
EEECCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH
DRAASLLRPGGVLLYATCSVEPEENELQTEAFLKRHPEFIAEASRLTLPGSHEGFDGGFA
HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHEECCCCCCCCCCCHH
ARFRKTEG
HHEECCCC
>Mature Secondary Structure 
TARELALRVLLELDGMRKSEELLNRMHEHAGLGKNDRALAKELVAGTLKYRLQCDFIIA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEHHHHHH
RFYRHDYAKAATVLKHILRLGVYQLLRLDRVPKSAAVNESVKLARKFKGDHLARLVNGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
RNISKATIDLDAWTAEMPESKRLSILYSFPEWLAARWLMRYGPDATLAMLAHGNLPPATG
HHHHHHEEEECHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
YRINRLKANPETLLARPELSDAKRVADADGLDRFFFSKQFALLEPLLKEGLVSVQNPAQG
CEEEEEECCHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCC
QACLMAAPEPGSTVFDMCAAPGGKSTFMAELMENRGRIIALDRTPAKVARIASNASALGI
CEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEEE
TIIEPREGDALTFDPGCAMDTILLDAPCTGTGVLGRRAELRWRTTPEKLRELAALQAAML
EEECCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH
DRAASLLRPGGVLLYATCSVEPEENELQTEAFLKRHPEFIAEASRLTLPGSHEGFDGGFA
HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHEECCCCCCCCCCCHH
ARFRKTEG
HHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]