Click here to switch to the map view.

The map label for this gene is ybcL [C]

Identifier: 21673435

GI number: 21673435

Start: 601737

End: 602312

Strand: Reverse

Name: ybcL [C]

Synonym: CT0600

Alternate gene names: 21673435

Gene position: 602312-601737 (Counterclockwise)

Preceding gene: 21673437

Following gene: 21673431

Centisome position: 27.95

GC content: 57.99

Gene sequence:

>576_bases
ATGATGTCACGATCAATCCAAAACCCTCTGGCTGCGCTTGTTGCACTGCTGATGCTCATGCCCGTCATGCTCCGGGCTGG
CCAGAAAGGAGAAGCCATGACTTTTGAACTGACCTCAACGGCATTCCGGAACATGGGCGCGATCCCGGCGCTCTACACCT
GCGAAGGCAAAAACATCTCGCCGCCGCTAACCTGGAAAAACATCCCCAAAGGCACGAAAAGCCTCGTGCTCATCGTGGAC
GATCCCGACGCACCAGACCCGGCAGCCCCGAAATTCACCTGGGTACACTGGGTGCTCTACAACATTCCACCGGGAAAAAC
AGGATTCGCCGAAGGAGCCGGAAACCACCCCGCCGAGACCGAAATGCAGGAAGGATTCAACAGCTGGAACCGTGGCGGCT
ACGGCGGCCCCTGCCCGCCCATCGGCACACACCGCTACTTCTTCAAGCTCTACGCGCTCGACACCGTCATTGACGACCTG
CTCTCCCCACTCAAAGCCGACGTGGAAGCTGCCATGCAAGGCCATATTCTCGGCGAAACCGTGCTGATTGGAACGTACAA
AAAGAGGGGCAAGTGA

Upstream 100 bases:

>100_bases
TGGTTTCATTCATCGTTTTCACCGGGGAAAACAGAGAACCAATAGCCGCAGGTAAGCGTTCCAGCGAAACATCCCTGAAG
CACCTCAACCACTCGTTATC

Downstream 100 bases:

>100_bases
CGGTGTGGACGAAAAAAATGAATGGAAGAGCGAGATATTCCCCCTCTTCCATTCATCATTTATAATGCTCAACTCTTCTT
CCTGTGCCCCTCGAACTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MMSRSIQNPLAALVALLMLMPVMLRAGQKGEAMTFELTSTAFRNMGAIPALYTCEGKNISPPLTWKNIPKGTKSLVLIVD
DPDAPDPAAPKFTWVHWVLYNIPPGKTGFAEGAGNHPAETEMQEGFNSWNRGGYGGPCPPIGTHRYFFKLYALDTVIDDL
LSPLKADVEAAMQGHILGETVLIGTYKKRGK

Sequences:

>Translated_191_residues
MMSRSIQNPLAALVALLMLMPVMLRAGQKGEAMTFELTSTAFRNMGAIPALYTCEGKNISPPLTWKNIPKGTKSLVLIVD
DPDAPDPAAPKFTWVHWVLYNIPPGKTGFAEGAGNHPAETEMQEGFNSWNRGGYGGPCPPIGTHRYFFKLYALDTVIDDL
LSPLKADVEAAMQGHILGETVLIGTYKKRGK
>Mature_191_residues
MMSRSIQNPLAALVALLMLMPVMLRAGQKGEAMTFELTSTAFRNMGAIPALYTCEGKNISPPLTWKNIPKGTKSLVLIVD
DPDAPDPAAPKFTWVHWVLYNIPPGKTGFAEGAGNHPAETEMQEGFNSWNRGGYGGPCPPIGTHRYFFKLYALDTVIDDL
LSPLKADVEAAMQGHILGETVLIGTYKKRGK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=171, Percent_Identity=32.7485380116959, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1786990, Length=156, Percent_Identity=32.6923076923077, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20803; Mature: 20803

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSRSIQNPLAALVALLMLMPVMLRAGQKGEAMTFELTSTAFRNMGAIPALYTCEGKNIS
CCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCEEEEECCCCCC
PPLTWKNIPKGTKSLVLIVDDPDAPDPAAPKFTWVHWVLYNIPPGKTGFAEGAGNHPAET
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHH
EMQEGFNSWNRGGYGGPCPPIGTHRYFFKLYALDTVIDDLLSPLKADVEAAMQGHILGET
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VLIGTYKKRGK
EEEECCCCCCC
>Mature Secondary Structure
MMSRSIQNPLAALVALLMLMPVMLRAGQKGEAMTFELTSTAFRNMGAIPALYTCEGKNIS
CCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCEEEEECCCCCC
PPLTWKNIPKGTKSLVLIVDDPDAPDPAAPKFTWVHWVLYNIPPGKTGFAEGAGNHPAET
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHH
EMQEGFNSWNRGGYGGPCPPIGTHRYFFKLYALDTVIDDLLSPLKADVEAAMQGHILGET
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VLIGTYKKRGK
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]