Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21673416

Identifier: 21673416

GI number: 21673416

Start: 588937

End: 589623

Strand: Direct

Name: 21673416

Synonym: CT0581

Alternate gene names: NA

Gene position: 588937-589623 (Clockwise)

Preceding gene: 21673415

Following gene: 21673418

Centisome position: 27.33

GC content: 32.75

Gene sequence:

>687_bases
TTGAAATCTCAGATGAAGATGGATTATCAGAAAATTAAAAAGAGGTTAGGTTACTCTTTTGCATTTGTGTTTGGATTTTT
TTTCGGCATAAGCACATGTGTTAATTTTACTATTGATGCAAAGTGGACAGATTTTGTTTCTTTGGCTTTTACTGCCGCAG
GTGTTGCATTAGGATATATAACTTTTTTTCGCTGGTGGCGTAATAAGAAAAAAGACGACTCATATCGTGTTTCAAAAGAT
TACTTGAATGCTTTAAATGAAGTGCAAGAGGTAATAAGAGAAATCGACTTTCAGTATTTTTATTTATGCCCTGCTCCTGG
CTTGCTGGTTGAGGGAGATGAGGTTTCTTTCAAGCGTATCAAGCAGGTTGATCAATTAAGTCATCAGCTTTATCTGTGTC
GTGTAAATTTGGTTAATGCAAAAAGTGAATTGAATTTTTGGGACGTAAATTTGAGCGCGGCGTTTGAAAAAGAACATGAA
GAGTTGTTAAAGTGTCTTGCAAATCTTAAGGTCGTAATGACGGGGTTGAGTAGTCAGCTTTTTCATTATTATAAAAATCA
TTCTAATGAGTATATGACTGAGATTGATAGACATAAAAAAATGTTTAATGGTTATTTAAAATCTATTCGAGATATTTTAA
ATAAGCGCAGATCATTAAAATTCGATGGAATTTTTACTTTTAAATGA

Upstream 100 bases:

>100_bases
AAACATCCGAATATGAGGTAAAGAAGCTCAAGAAGGGTATCTGAAAAGTCTCTGGACAGTATATAGTTAAATCGCTCGCC
TTTAAGTTGATAATGATATT

Downstream 100 bases:

>100_bases
TGGATTAAGACTCTGGGACGTTGATCCGTTGCTGAAAATACAAAAGCTTTTAATGTAGGACAGAATCCCGGTTTTGTTCT
TTTTGCAGGAGTTTTTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKSQMKMDYQKIKKRLGYSFAFVFGFFFGISTCVNFTIDAKWTDFVSLAFTAAGVALGYITFFRWWRNKKKDDSYRVSKD
YLNALNEVQEVIREIDFQYFYLCPAPGLLVEGDEVSFKRIKQVDQLSHQLYLCRVNLVNAKSELNFWDVNLSAAFEKEHE
ELLKCLANLKVVMTGLSSQLFHYYKNHSNEYMTEIDRHKKMFNGYLKSIRDILNKRRSLKFDGIFTFK

Sequences:

>Translated_228_residues
MKSQMKMDYQKIKKRLGYSFAFVFGFFFGISTCVNFTIDAKWTDFVSLAFTAAGVALGYITFFRWWRNKKKDDSYRVSKD
YLNALNEVQEVIREIDFQYFYLCPAPGLLVEGDEVSFKRIKQVDQLSHQLYLCRVNLVNAKSELNFWDVNLSAAFEKEHE
ELLKCLANLKVVMTGLSSQLFHYYKNHSNEYMTEIDRHKKMFNGYLKSIRDILNKRRSLKFDGIFTFK
>Mature_228_residues
MKSQMKMDYQKIKKRLGYSFAFVFGFFFGISTCVNFTIDAKWTDFVSLAFTAAGVALGYITFFRWWRNKKKDDSYRVSKD
YLNALNEVQEVIREIDFQYFYLCPAPGLLVEGDEVSFKRIKQVDQLSHQLYLCRVNLVNAKSELNFWDVNLSAAFEKEHE
ELLKCLANLKVVMTGLSSQLFHYYKNHSNEYMTEIDRHKKMFNGYLKSIRDILNKRRSLKFDGIFTFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26984; Mature: 26984

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQMKMDYQKIKKRLGYSFAFVFGFFFGISTCVNFTIDAKWTDFVSLAFTAAGVALGYI
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHH
TFFRWWRNKKKDDSYRVSKDYLNALNEVQEVIREIDFQYFYLCPAPGLLVEGDEVSFKRI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCHHHHHH
KQVDQLSHQLYLCRVNLVNAKSELNFWDVNLSAAFEKEHEELLKCLANLKVVMTGLSSQL
HHHHHHHHHEEEEEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FHYYKNHSNEYMTEIDRHKKMFNGYLKSIRDILNKRRSLKFDGIFTFK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
>Mature Secondary Structure
MKSQMKMDYQKIKKRLGYSFAFVFGFFFGISTCVNFTIDAKWTDFVSLAFTAAGVALGYI
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHH
TFFRWWRNKKKDDSYRVSKDYLNALNEVQEVIREIDFQYFYLCPAPGLLVEGDEVSFKRI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCHHHHHH
KQVDQLSHQLYLCRVNLVNAKSELNFWDVNLSAAFEKEHEELLKCLANLKVVMTGLSSQL
HHHHHHHHHEEEEEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FHYYKNHSNEYMTEIDRHKKMFNGYLKSIRDILNKRRSLKFDGIFTFK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA