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The map label for this gene is ydhJ [C]

Identifier: 21673388

GI number: 21673388

Start: 560810

End: 561754

Strand: Direct

Name: ydhJ [C]

Synonym: CT0553

Alternate gene names: 21673388

Gene position: 560810-561754 (Clockwise)

Preceding gene: 21673387

Following gene: 21673389

Centisome position: 26.02

GC content: 58.1

Gene sequence:

>945_bases
ATGAGAAATAAACTCCTGATCGGCATCGCGATCTTCGGCATTCTGCTTGGCCTGGGTGCGGCTTTTTTCATGAAGCTTCG
TCCGAAGTCGGAGCCGCCCGCCTTTACACCGGCGTCGAATCCCTACCGGAGCGGAATTTACGCCAACGGCATCATCGAGA
GCGCACAGAAAAACGGCACGAACGTGAACATCTACCCGGAAGTCTCCGGCACAGTGCTGAAGATTTTTGTTCACGAAGGT
CAGCAGGTTAAAGCGGGCGAGCCGCTCTTGGCGCTCGACGACGCGGTGCAGCGCTCGACGACCGAATCGGCGAAGGCAAG
CATCGCCGTCGCTGAAGCGACGCTCGCCAACGTGCAAGCGCAGTACGCAAAGCTGAAAGCCTCGTGGAATCTCGATCCTC
GTTCGGTGAGCAAGGATGCGCTCGATACTGCCGCCAATGCCGTTCGTGCGGGGAAGGCGAGTCTTGAGCTTGCCCGCAAG
CAGTACGATGCAGCCCGAGCGCTGCTTGGCAAATACACCCTCACGGCGCGCGAAGACGGTACGGTTCTGGCGATCAACAC
CTCGGTTGGGAGCTACATTTCCAGTCAGGGCGGTTACAACTCCTACACAGGAGGCTACGTGCCGGTCATCGTTATGGGGA
ACGCCGAAAACGCGCTTCAGGTGCGCTGCTACGTTGACGAAATTCTGATCCAGCGACTGCCGAAGCCCGACAGGATGAGC
GCCATCATGTCAATCCGCGGTACCACGCTCAAGATTCCTCTGACATTCGAGCGGTTCGAGCCGAATGTCACCCCCAAGAT
CGAGCTGTCGAGCCAACGCACCGAGCGGGTGGATGTCCGGGTGCTGCCGGTCATCTTCAGCTTCAAGAAGCCAGCAAACC
TGACCCTCTATCCCGGTCAGCTGGTCGATATTTACATTGGTGAACAGGCCGCGAAAAACCAGTAA

Upstream 100 bases:

>100_bases
ACGCACGACAGCCGTATTTACGAATATGCTGACCGGATCATGAAGATGGAGGATGGCAAAGTCGTCGGGTACGAATCTGG
TTACGAAAACAGTCAACGGC

Downstream 100 bases:

>100_bases
CCGGATGAGAACCGTGTCGAAAAAGATCGCTTCACGCGGCGTCGTACTGCTTGCCGTTCCCGCGCTTCTGCTGTCGGGAT
GCGCGGCAGGACCGGACTTC

Product: ABC-type export system, membrane fusion protein

Products: NA

Alternate protein names: Secretion Protein HlyD; Efflux Transporter RND Family MFP Subunit; ABC-Type Export System Membrane Fusion Protein; Efflux ABC Transporter Membrane Fusion Protein Family; Export System Membrane Fusion Protein; Membrane-Fusion Protein; Auxiliary Transport Protein Membrane Fusion Protein Family; Efflux Transporter

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRNKLLIGIAIFGILLGLGAAFFMKLRPKSEPPAFTPASNPYRSGIYANGIIESAQKNGTNVNIYPEVSGTVLKIFVHEG
QQVKAGEPLLALDDAVQRSTTESAKASIAVAEATLANVQAQYAKLKASWNLDPRSVSKDALDTAANAVRAGKASLELARK
QYDAARALLGKYTLTAREDGTVLAINTSVGSYISSQGGYNSYTGGYVPVIVMGNAENALQVRCYVDEILIQRLPKPDRMS
AIMSIRGTTLKIPLTFERFEPNVTPKIELSSQRTERVDVRVLPVIFSFKKPANLTLYPGQLVDIYIGEQAAKNQ

Sequences:

>Translated_314_residues
MRNKLLIGIAIFGILLGLGAAFFMKLRPKSEPPAFTPASNPYRSGIYANGIIESAQKNGTNVNIYPEVSGTVLKIFVHEG
QQVKAGEPLLALDDAVQRSTTESAKASIAVAEATLANVQAQYAKLKASWNLDPRSVSKDALDTAANAVRAGKASLELARK
QYDAARALLGKYTLTAREDGTVLAINTSVGSYISSQGGYNSYTGGYVPVIVMGNAENALQVRCYVDEILIQRLPKPDRMS
AIMSIRGTTLKIPLTFERFEPNVTPKIELSSQRTERVDVRVLPVIFSFKKPANLTLYPGQLVDIYIGEQAAKNQ
>Mature_314_residues
MRNKLLIGIAIFGILLGLGAAFFMKLRPKSEPPAFTPASNPYRSGIYANGIIESAQKNGTNVNIYPEVSGTVLKIFVHEG
QQVKAGEPLLALDDAVQRSTTESAKASIAVAEATLANVQAQYAKLKASWNLDPRSVSKDALDTAANAVRAGKASLELARK
QYDAARALLGKYTLTAREDGTVLAINTSVGSYISSQGGYNSYTGGYVPVIVMGNAENALQVRCYVDEILIQRLPKPDRMS
AIMSIRGTTLKIPLTFERFEPNVTPKIELSSQRTERVDVRVLPVIFSFKKPANLTLYPGQLVDIYIGEQAAKNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34025; Mature: 34025

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKLLIGIAIFGILLGLGAAFFMKLRPKSEPPAFTPASNPYRSGIYANGIIESAQKNGT
CCCEEEEHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHCCCEECHHHHHHHCCCC
NVNIYPEVSGTVLKIFVHEGQQVKAGEPLLALDDAVQRSTTESAKASIAVAEATLANVQA
EEEEEECCCCEEEEEEEECCCEECCCCCEEEHHHHHHHCCCHHHHHEEEEHHHHHHHHHH
QYAKLKASWNLDPRSVSKDALDTAANAVRAGKASLELARKQYDAARALLGKYTLTAREDG
HHHHEEECCCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCC
TVLAINTSVGSYISSQGGYNSYTGGYVPVIVMGNAENALQVRCYVDEILIQRLPKPDRMS
EEEEEECCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHCCCCHHHH
AIMSIRGTTLKIPLTFERFEPNVTPKIELSSQRTERVDVRVLPVIFSFKKPANLTLYPGQ
HHHEECCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCEEEECCC
LVDIYIGEQAAKNQ
EEEEEECCHHCCCC
>Mature Secondary Structure
MRNKLLIGIAIFGILLGLGAAFFMKLRPKSEPPAFTPASNPYRSGIYANGIIESAQKNGT
CCCEEEEHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHCCCEECHHHHHHHCCCC
NVNIYPEVSGTVLKIFVHEGQQVKAGEPLLALDDAVQRSTTESAKASIAVAEATLANVQA
EEEEEECCCCEEEEEEEECCCEECCCCCEEEHHHHHHHCCCHHHHHEEEEHHHHHHHHHH
QYAKLKASWNLDPRSVSKDALDTAANAVRAGKASLELARKQYDAARALLGKYTLTAREDG
HHHHEEECCCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCC
TVLAINTSVGSYISSQGGYNSYTGGYVPVIVMGNAENALQVRCYVDEILIQRLPKPDRMS
EEEEEECCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHCCCCHHHH
AIMSIRGTTLKIPLTFERFEPNVTPKIELSSQRTERVDVRVLPVIFSFKKPANLTLYPGQ
HHHEECCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCEEEECCC
LVDIYIGEQAAKNQ
EEEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA