| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is acn [H]
Identifier: 21673378
GI number: 21673378
Start: 550411
End: 552975
Strand: Reverse
Name: acn [H]
Synonym: CT0543
Alternate gene names: 21673378
Gene position: 552975-550411 (Counterclockwise)
Preceding gene: 21673380
Following gene: 21673377
Centisome position: 25.66
GC content: 61.09
Gene sequence:
>2565_bases ATGAGTCTCATCAGCCAGTATCGCGCCCATACTGCGGAGCGCGCTCAACTCGGTATTCCTCCGCTTCCGCTGACCGCCGC CCAGGCCATCGAGCTGATCGCGCTGCTCAAGCAGAATCCGGTGCAGGAGCAGGAGTATCTTCTCGATCTGTTCGTGAACC ACATCAGCCCCGGCGTGGACGATGCCGCGCTCGAAAAGGCGGCTTTTCTCGATGCCATCATTCGCGGCAACGCTTCGTGC GCGGTGATCACGCCAGTCGAGGCGGTCAGGATCCTCGGTACGATGCTTGGCGGTTACAACGTCAAGCCAATGATCGATGC GCTCTCCAGTGCCGACAACGCGGTTGCCGAAGCCGCTGCTCTGGCCCTGAAAAAGACTCTGCTCGTCTATGATTCATTTG ACACGGTGGTTGAGCTGGCCAAAACCAACAGCTACGCCAAAGAGGTGCTCGAATCGTGGGCTAATGGAGAATGGTTCACC TCGAAGCCAGCCCTTGCCGAGAAGATGACCCTCACGGTCTTCAAGGTTCCGGGCGAAACCAACACCGACGACCTCTCTCC CGCCAGCGAAGCCTTCACCCGCAGCGATATTCCGATGCACGCGCTGAGCATGCTCCGCTCGAAGATGGACGACCCGATCG CGACCATCGCCCAGCTCAAGGAGAAGGGCTATCCGCTCGCGTACGTCGGCGACGTGGTCGGCACTGGCTCAAGCCGCAAG TCGGGTATCAACTCCGTGCAGTGGCACCTCGGCGAGGATATTCCCGCCGTGCCGAACAAGCGCACCGCCGGCGTGGTGAT CGGCGGCATCATCGCCCCGATCTTTTTCAACACCGCCGAAGACTCCGGCGCGCTGCCGATCCAGGCAGATGTGACCTCGA TGGAAATGGGCGACGTGATCGACCTCTATCCGTTCAAAGGCGTGATCGAAAAGAACGGCAAAGTGATTTCGACCTTCTCG CTCGAACCCAACACGCTTGCCGACGAAGTTCGCGCTGGCGGCCGTATTCCGCTTATCATCGGTCGCAACCTCACCCGCAA GGCTCGCAAGACGCTCGGCCTCGGCGAAGAGTCGATCTTCAGCCGTCCCGAGCAGCCCGCCGATACCGGCAAGGGCTACA CCCTGGCGCAGAAGATAGTCGGCAAGGCATGCGGCCTCCCTGGCGTTCGCCCCGGCATGTACGTCGAAGCCGAGACCCTC ACGGTCGGCTCGCAAGACACCACCGGCCCGATGACCCGCGACGAAATCAAGGAGCTCGCTGCGCTGAGTTTCAGCGCCGA TCTTTTCATGCAGAGCTTCTGCCACACGGCAGCTTACCCGAAACCCTCGGACGTGCAGCTGCACCGAAGCCTGCCCTATT TTATCATGAGCCGCGGCGGCGTGGCACTCAAGCCGGGCGACGGCGTCATACACACCTGGCTGAACCGCATGGTGCTGCCC GACACGCTCGGCACTGGCGGCGACTCGCACACCCGCTTCCCGATCGGCTGTTCCTTCCCGGCAGGCTCCGGCCTCGTCGC CTTCGCAGGCGTGACTGGCACCATGCCGCTCAACATGCCGGAGTCGGTGCTCGTCCGCTTTACGGGTGAACTCCAGCCCG GCATCACCCTGCGCGATCTGGTCAACGCCATTCCGTACGTCGCCATCAAGCGGGGGCTGCTGACCGTCGAGAAGAAGGGC AAAAAGAACATCTTCGCCGGCAAAGTGCTTGAAATCGAAGGTTTGCCGCAGCTCAAGGTCGAGCAGGCGTTCGAGCTTTC CGACGCCTCCGCCGAGCGCAGCGCTGCGGCCTGCACGGTGCGACTCGACAAGGAGCCGGTGATCGAGTACCTACAGTCCA ACGTCAAATTGCTTGCCCAGATGATCGAAGAGGGCTACGGCGACGCCAACACCATCAAGCGCCGCATCGGCAAGATGGAG GAGTGGCTCGCCAATCCGCAGCTCCTCGAACCGGACGCTGACGCCGAATACGCGGCAGTGATCGAGATCAACATGAGCGA AATCACCGAACCGATCCTCGCCTGCCCGAATGATCCCGACGACGTGGCCACGCTCAGCGAGATTCTCGCCGACGAGAAGC GCCCGAAAAACATCGACGAGGTGTTCGTGGGAAGCTGCATGACCAATATCGGCCACTTCCGCGCGCTTGGTGAAGTGCTT CGTGGCAAGGGTCAGGCCAAAACCAGGCTCTGGGTGGTGCCGCCGACCAAGATGGACATGAAGAAGCTGATTGAAGAGGG CTATTACTCAATTTTCGGCACCGCAGGCGCACGCACCGAGGTGCCCGGCTGTTCGCTCTGTATGGGCAACCAGGCTCGCG TGGCCGACAACGCCGTGGTCTTCTCGACAAGCACTCGCAACTTCGACGACCGCATGGGCAAGGGCGCGAAGGTCTATCTC GGCTCCGCCGAACTGGCCGCCGTCTGTGCTTTGCTCGGCCATCTGCCCAGCAAGGATGAGTATATGGAGATCGCCGGTTC GCTGTCGAAGAACAGTGACAAGGTTTACCGTTACCTCAACTTCCATGAGGTCACCTCTCAGGAGCTACAACTGCTTGTCG ATTAA
Upstream 100 bases:
>100_bases GCTTTTTGCTTTTTTCAAGGCAAAAACCATTCCGGTTGTTACCGTTCGCTGTAATCACCATCGAATAATCATTCATAATC ATTTCTCTGGAGATCATTAT
Downstream 100 bases:
>100_bases TCGATTACAGGTTTCCACCTCCCTCCGTCTTTGTGCAGGAGAGGAGGTGGAGACGCTTCTGTCGTATGCCTTTTGCTGCT GATCTTTGTTTTTGAATGCC
Product: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
Products: NA
Alternate protein names: Aconitase 2; 2-methylisocitrate dehydratase; Citrate hydro-lyase 2 [H]
Number of amino acids: Translated: 854; Mature: 853
Protein sequence:
>854_residues MSLISQYRAHTAERAQLGIPPLPLTAAQAIELIALLKQNPVQEQEYLLDLFVNHISPGVDDAALEKAAFLDAIIRGNASC AVITPVEAVRILGTMLGGYNVKPMIDALSSADNAVAEAAALALKKTLLVYDSFDTVVELAKTNSYAKEVLESWANGEWFT SKPALAEKMTLTVFKVPGETNTDDLSPASEAFTRSDIPMHALSMLRSKMDDPIATIAQLKEKGYPLAYVGDVVGTGSSRK SGINSVQWHLGEDIPAVPNKRTAGVVIGGIIAPIFFNTAEDSGALPIQADVTSMEMGDVIDLYPFKGVIEKNGKVISTFS LEPNTLADEVRAGGRIPLIIGRNLTRKARKTLGLGEESIFSRPEQPADTGKGYTLAQKIVGKACGLPGVRPGMYVEAETL TVGSQDTTGPMTRDEIKELAALSFSADLFMQSFCHTAAYPKPSDVQLHRSLPYFIMSRGGVALKPGDGVIHTWLNRMVLP DTLGTGGDSHTRFPIGCSFPAGSGLVAFAGVTGTMPLNMPESVLVRFTGELQPGITLRDLVNAIPYVAIKRGLLTVEKKG KKNIFAGKVLEIEGLPQLKVEQAFELSDASAERSAAACTVRLDKEPVIEYLQSNVKLLAQMIEEGYGDANTIKRRIGKME EWLANPQLLEPDADAEYAAVIEINMSEITEPILACPNDPDDVATLSEILADEKRPKNIDEVFVGSCMTNIGHFRALGEVL RGKGQAKTRLWVVPPTKMDMKKLIEEGYYSIFGTAGARTEVPGCSLCMGNQARVADNAVVFSTSTRNFDDRMGKGAKVYL GSAELAAVCALLGHLPSKDEYMEIAGSLSKNSDKVYRYLNFHEVTSQELQLLVD
Sequences:
>Translated_854_residues MSLISQYRAHTAERAQLGIPPLPLTAAQAIELIALLKQNPVQEQEYLLDLFVNHISPGVDDAALEKAAFLDAIIRGNASC AVITPVEAVRILGTMLGGYNVKPMIDALSSADNAVAEAAALALKKTLLVYDSFDTVVELAKTNSYAKEVLESWANGEWFT SKPALAEKMTLTVFKVPGETNTDDLSPASEAFTRSDIPMHALSMLRSKMDDPIATIAQLKEKGYPLAYVGDVVGTGSSRK SGINSVQWHLGEDIPAVPNKRTAGVVIGGIIAPIFFNTAEDSGALPIQADVTSMEMGDVIDLYPFKGVIEKNGKVISTFS LEPNTLADEVRAGGRIPLIIGRNLTRKARKTLGLGEESIFSRPEQPADTGKGYTLAQKIVGKACGLPGVRPGMYVEAETL TVGSQDTTGPMTRDEIKELAALSFSADLFMQSFCHTAAYPKPSDVQLHRSLPYFIMSRGGVALKPGDGVIHTWLNRMVLP DTLGTGGDSHTRFPIGCSFPAGSGLVAFAGVTGTMPLNMPESVLVRFTGELQPGITLRDLVNAIPYVAIKRGLLTVEKKG KKNIFAGKVLEIEGLPQLKVEQAFELSDASAERSAAACTVRLDKEPVIEYLQSNVKLLAQMIEEGYGDANTIKRRIGKME EWLANPQLLEPDADAEYAAVIEINMSEITEPILACPNDPDDVATLSEILADEKRPKNIDEVFVGSCMTNIGHFRALGEVL RGKGQAKTRLWVVPPTKMDMKKLIEEGYYSIFGTAGARTEVPGCSLCMGNQARVADNAVVFSTSTRNFDDRMGKGAKVYL GSAELAAVCALLGHLPSKDEYMEIAGSLSKNSDKVYRYLNFHEVTSQELQLLVD >Mature_853_residues SLISQYRAHTAERAQLGIPPLPLTAAQAIELIALLKQNPVQEQEYLLDLFVNHISPGVDDAALEKAAFLDAIIRGNASCA VITPVEAVRILGTMLGGYNVKPMIDALSSADNAVAEAAALALKKTLLVYDSFDTVVELAKTNSYAKEVLESWANGEWFTS KPALAEKMTLTVFKVPGETNTDDLSPASEAFTRSDIPMHALSMLRSKMDDPIATIAQLKEKGYPLAYVGDVVGTGSSRKS GINSVQWHLGEDIPAVPNKRTAGVVIGGIIAPIFFNTAEDSGALPIQADVTSMEMGDVIDLYPFKGVIEKNGKVISTFSL EPNTLADEVRAGGRIPLIIGRNLTRKARKTLGLGEESIFSRPEQPADTGKGYTLAQKIVGKACGLPGVRPGMYVEAETLT VGSQDTTGPMTRDEIKELAALSFSADLFMQSFCHTAAYPKPSDVQLHRSLPYFIMSRGGVALKPGDGVIHTWLNRMVLPD TLGTGGDSHTRFPIGCSFPAGSGLVAFAGVTGTMPLNMPESVLVRFTGELQPGITLRDLVNAIPYVAIKRGLLTVEKKGK KNIFAGKVLEIEGLPQLKVEQAFELSDASAERSAAACTVRLDKEPVIEYLQSNVKLLAQMIEEGYGDANTIKRRIGKMEE WLANPQLLEPDADAEYAAVIEINMSEITEPILACPNDPDDVATLSEILADEKRPKNIDEVFVGSCMTNIGHFRALGEVLR GKGQAKTRLWVVPPTKMDMKKLIEEGYYSIFGTAGARTEVPGCSLCMGNQARVADNAVVFSTSTRNFDDRMGKGAKVYLG SAELAAVCALLGHLPSKDEYMEIAGSLSKNSDKVYRYLNFHEVTSQELQLLVD
Specific function: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate as well as the dehydration of 2-methylisocitrate to cis-2-methylaconitate [H]
COG id: COG1049
COG function: function code C; Aconitase B
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aconitase/IPM isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367097, Length=858, Percent_Identity=63.2867132867133, Blast_Score=1082, Evalue=0.0, Organism=Escherichia coli, GI1786259, Length=386, Percent_Identity=26.9430051813472, Blast_Score=77, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015931 - InterPro: IPR015937 - InterPro: IPR001030 - InterPro: IPR015928 - InterPro: IPR015932 - InterPro: IPR018136 - InterPro: IPR004406 - InterPro: IPR015930 - InterPro: IPR015933 - InterPro: IPR015929 [H]
Pfam domain/function: PF00330 Aconitase; PF06434 Aconitase_2_N; PF11791 Aconitase_B_N [H]
EC number: =4.2.1.3; =4.2.1.99 [H]
Molecular weight: Translated: 92164; Mature: 92033
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00450 ACONITASE_1 ; PS01244 ACONITASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLISQYRAHTAERAQLGIPPLPLTAAQAIELIALLKQNPVQEQEYLLDLFVNHISPGVD CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC DAALEKAAFLDAIIRGNASCAVITPVEAVRILGTMLGGYNVKPMIDALSSADNAVAEAAA HHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHH LALKKTLLVYDSFDTVVELAKTNSYAKEVLESWANGEWFTSKPALAEKMTLTVFKVPGET HHHHHHHHEECCHHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCHHHCEEEEEEECCCCC NTDDLSPASEAFTRSDIPMHALSMLRSKMDDPIATIAQLKEKGYPLAYVGDVVGTGSSRK CCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECHHHCCCCCCC SGINSVQWHLGEDIPAVPNKRTAGVVIGGIIAPIFFNTAEDSGALPIQADVTSMEMGDVI CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEEECCCHHCCCCEE DLYPFKGVIEKNGKVISTFSLEPNTLADEVRAGGRIPLIIGRNLTRKARKTLGLGEESIF EECCCCCCEECCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHH SRPEQPADTGKGYTLAQKIVGKACGLPGVRPGMYVEAETLTVGSQDTTGPMTRDEIKELA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHH ALSFSADLFMQSFCHTAAYPKPSDVQLHRSLPYFIMSRGGVALKPGDGVIHTWLNRMVLP HHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEECCCCEEECCCCCHHHHHHCCEECC DTLGTGGDSHTRFPIGCSFPAGSGLVAFAGVTGTMPLNMPESVLVRFTGELQPGITLRDL CCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCHHHHEEEECCCCCCCCHHHH VNAIPYVAIKRGLLTVEKKGKKNIFAGKVLEIEGLPQLKVEQAFELSDASAERSAAACTV HHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEE RLDKEPVIEYLQSNVKLLAQMIEEGYGDANTIKRRIGKMEEWLANPQLLEPDADAEYAAV EECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEE IEINMSEITEPILACPNDPDDVATLSEILADEKRPKNIDEVFVGSCMTNIGHFRALGEVL EEEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RGKGQAKTRLWVVPPTKMDMKKLIEEGYYSIFGTAGARTEVPGCSLCMGNQARVADNAVV HCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCCCCEECCCEEE FSTSTRNFDDRMGKGAKVYLGSAELAAVCALLGHLPSKDEYMEIAGSLSKNSDKVYRYLN EECCCCCHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHH FHEVTSQELQLLVD HHHHCHHHHHEECC >Mature Secondary Structure SLISQYRAHTAERAQLGIPPLPLTAAQAIELIALLKQNPVQEQEYLLDLFVNHISPGVD CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC DAALEKAAFLDAIIRGNASCAVITPVEAVRILGTMLGGYNVKPMIDALSSADNAVAEAAA HHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHH LALKKTLLVYDSFDTVVELAKTNSYAKEVLESWANGEWFTSKPALAEKMTLTVFKVPGET HHHHHHHHEECCHHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCHHHCEEEEEEECCCCC NTDDLSPASEAFTRSDIPMHALSMLRSKMDDPIATIAQLKEKGYPLAYVGDVVGTGSSRK CCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECHHHCCCCCCC SGINSVQWHLGEDIPAVPNKRTAGVVIGGIIAPIFFNTAEDSGALPIQADVTSMEMGDVI CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEEECCCHHCCCCEE DLYPFKGVIEKNGKVISTFSLEPNTLADEVRAGGRIPLIIGRNLTRKARKTLGLGEESIF EECCCCCCEECCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHH SRPEQPADTGKGYTLAQKIVGKACGLPGVRPGMYVEAETLTVGSQDTTGPMTRDEIKELA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHH ALSFSADLFMQSFCHTAAYPKPSDVQLHRSLPYFIMSRGGVALKPGDGVIHTWLNRMVLP HHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEECCCCEEECCCCCHHHHHHCCEECC DTLGTGGDSHTRFPIGCSFPAGSGLVAFAGVTGTMPLNMPESVLVRFTGELQPGITLRDL CCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCHHHHEEEECCCCCCCCHHHH VNAIPYVAIKRGLLTVEKKGKKNIFAGKVLEIEGLPQLKVEQAFELSDASAERSAAACTV HHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEE RLDKEPVIEYLQSNVKLLAQMIEEGYGDANTIKRRIGKMEEWLANPQLLEPDADAEYAAV EECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEE IEINMSEITEPILACPNDPDDVATLSEILADEKRPKNIDEVFVGSCMTNIGHFRALGEVL EEEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RGKGQAKTRLWVVPPTKMDMKKLIEEGYYSIFGTAGARTEVPGCSLCMGNQARVADNAVV HCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCCCCEECCCEEE FSTSTRNFDDRMGKGAKVYLGSAELAAVCALLGHLPSKDEYMEIAGSLSKNSDKVYRYLN EECCCCCHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHH FHEVTSQELQLLVD HHHHCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]