| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673281
Identifier: 21673281
GI number: 21673281
Start: 465145
End: 465987
Strand: Reverse
Name: 21673281
Synonym: CT0443
Alternate gene names: NA
Gene position: 465987-465145 (Counterclockwise)
Preceding gene: 21673283
Following gene: 21673271
Centisome position: 21.62
GC content: 42.7
Gene sequence:
>843_bases ATGGATAAGAAACCGAGCATTTTAATTTTTATAGTTGCTTACAATGCGGAGAGTACGATTGAGAACGTCCTGATGCGCAT TCCTGCTGACCTGCTCGATGATTTTGATGCCGAAGTGCTCGTTATAGATGACCAATCTTCTGATGATACTGTATTACGCT GCGCTGAGACAATACAAAGCGGGAAAATCAGATTCAAGACCAATGTTCTGGTAAACCCCGAAAACCAGGGATATGGCGGA AATCAGAAGGTAGGCTACCAATACGCTATTGAGCATGATTTCGACTGTGTAGCACTACTCCATGGCGATGGGCAATATGC TCCGGAATACTTGAGAGATCTCATAACACCGGTTACAAAGGGAGAGGCCGAGGCAGTATTTGGTTCGAGAATGATGACAC CTTTTGGCGCACTAAAAGGAGGGATGCCCGCCTACAAGTTTGTAGGCAACAAAATTCTGACTTTGTTTCAGAATATCATG TTAAAAACCTCTTTAAGCGAATTTCACTCAGGCTACAGAGCATACTCCGTAAAAGCATTGAAGCAAATCCCGTTTCATTT AAATACGCCCGATTTCCATTTCGATACTGAAATAATAATCCAGCTGATTCTTTGGGGCTTCCGTATCGCAGAACGCCCGA TTCCAACCTATTATGGTGATGAAATCTGTTATGTGAATGGTCTCAAATACGCTTTAGATGTAGTCATTACCACAACGAAA GCACGTATGCAGCGCCTTGGTCTTTTTCACGAATGCAAATACGAAGTTATTCATCCGCATAATAGTAACGGTTATCCTGA GGCAAAACTATCCATAAAAAGTCCAAGCGGCAACCGCATTTGA
Upstream 100 bases:
>100_bases ACAGGTGCCCTATAATTGGGAAGGGTCTTACTCAAAAGGCGCTATCGAGGTCAAATTTATAGACTCACGCAGATACAGCT CTTTAAAAAGAAGAAAAGCA
Downstream 100 bases:
>100_bases GCCATTGGGGACGCGAACCCTGAATAATACGCCTTTTACAGCCTTCAAGCTGCAACAGATAATGACTCTTGAGTGATTAC CGGCATTTTGTGATTTATGA
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MDKKPSILIFIVAYNAESTIENVLMRIPADLLDDFDAEVLVIDDQSSDDTVLRCAETIQSGKIRFKTNVLVNPENQGYGG NQKVGYQYAIEHDFDCVALLHGDGQYAPEYLRDLITPVTKGEAEAVFGSRMMTPFGALKGGMPAYKFVGNKILTLFQNIM LKTSLSEFHSGYRAYSVKALKQIPFHLNTPDFHFDTEIIIQLILWGFRIAERPIPTYYGDEICYVNGLKYALDVVITTTK ARMQRLGLFHECKYEVIHPHNSNGYPEAKLSIKSPSGNRI
Sequences:
>Translated_280_residues MDKKPSILIFIVAYNAESTIENVLMRIPADLLDDFDAEVLVIDDQSSDDTVLRCAETIQSGKIRFKTNVLVNPENQGYGG NQKVGYQYAIEHDFDCVALLHGDGQYAPEYLRDLITPVTKGEAEAVFGSRMMTPFGALKGGMPAYKFVGNKILTLFQNIM LKTSLSEFHSGYRAYSVKALKQIPFHLNTPDFHFDTEIIIQLILWGFRIAERPIPTYYGDEICYVNGLKYALDVVITTTK ARMQRLGLFHECKYEVIHPHNSNGYPEAKLSIKSPSGNRI >Mature_280_residues MDKKPSILIFIVAYNAESTIENVLMRIPADLLDDFDAEVLVIDDQSSDDTVLRCAETIQSGKIRFKTNVLVNPENQGYGG NQKVGYQYAIEHDFDCVALLHGDGQYAPEYLRDLITPVTKGEAEAVFGSRMMTPFGALKGGMPAYKFVGNKILTLFQNIM LKTSLSEFHSGYRAYSVKALKQIPFHLNTPDFHFDTEIIIQLILWGFRIAERPIPTYYGDEICYVNGLKYALDVVITTTK ARMQRLGLFHECKYEVIHPHNSNGYPEAKLSIKSPSGNRI
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 31571; Mature: 31571
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKPSILIFIVAYNAESTIENVLMRIPADLLDDFDAEVLVIDDQSSDDTVLRCAETIQS CCCCCCEEEEEEEECCHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHC GKIRFKTNVLVNPENQGYGGNQKVGYQYAIEHDFDCVALLHGDGQYAPEYLRDLITPVTK CCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCC GEAEAVFGSRMMTPFGALKGGMPAYKFVGNKILTLFQNIMLKTSLSEFHSGYRAYSVKAL CCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KQIPFHLNTPDFHFDTEIIIQLILWGFRIAERPIPTYYGDEICYVNGLKYALDVVITTTK HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEEECHH ARMQRLGLFHECKYEVIHPHNSNGYPEAKLSIKSPSGNRI HHHHHHCCHHHCCEEEECCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MDKKPSILIFIVAYNAESTIENVLMRIPADLLDDFDAEVLVIDDQSSDDTVLRCAETIQS CCCCCCEEEEEEEECCHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHC GKIRFKTNVLVNPENQGYGGNQKVGYQYAIEHDFDCVALLHGDGQYAPEYLRDLITPVTK CCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCC GEAEAVFGSRMMTPFGALKGGMPAYKFVGNKILTLFQNIMLKTSLSEFHSGYRAYSVKAL CCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KQIPFHLNTPDFHFDTEIIIQLILWGFRIAERPIPTYYGDEICYVNGLKYALDVVITTTK HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEEECHH ARMQRLGLFHECKYEVIHPHNSNGYPEAKLSIKSPSGNRI HHHHHHCCHHHCCEEEECCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]