| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673259
Identifier: 21673259
GI number: 21673259
Start: 436969
End: 438918
Strand: Direct
Name: 21673259
Synonym: CT0420
Alternate gene names: NA
Gene position: 436969-438918 (Clockwise)
Preceding gene: 21673258
Following gene: 21673260
Centisome position: 20.28
GC content: 62.82
Gene sequence:
>1950_bases ATGAAAAGAAAATATTTCCCGTTTTCGGCCATTCTCGGCCAGGAGGATCTCAAAAAAGCGTTGCTGCTCAATGCCGTCAA TCCCCGCATTGGCGGTGTGCTGGTGCGCGGCGAGAAGGGCACGGCCAAATCGACCGCCGTCCGGGCGCTCGGCGCACTGC TTGCCGCAGCGAGGAACGGCAGCGGTGGTGAAGGCGAGGTGGTCGTGACGCTGCCGCTCAACGCCACCGAGGAGATGGTG GCCGGAGGCATCGATTTCCAGCAGACCATGAAGGAGGGGCGGCGCGTATTCCAGCCGGGCCTGCTCGCCAAAGCCCACAA GGGGATTCTGTATGTCGATGAAGTGAACCTGCTTGATGACCATCTGGTCGATATCGTCCTCGATGCGGCTTCCTCCGGCG AGAACCGCGTCGAGCGCGAAGGGATCACCCTCAGCCATCCCTCCCTTTTCGTGCTGGCCGGTACGATGAATCCCGAGGAG GGCGAGCTGCGCCCGCAGTTGCTCGACCGTTTCGGACTCTGCGTGGAGGTGCGCGGCGAGGCCGATCCAGCGCTTCGCGT CGATCTGATGTTGCGCAGGGAGGCGTTCGACCGTGAGCCTGAAGAGTTTTCGGAGAGGTATCGTGCCGAGGAGGAGCGGC TTGGGCGAACTATTGCCGATGCGCAGTCGCTTCTGCCGTCAGTCAGGATTCCGTCGCATTTGCGCGGCTTCATTTCGGAG CTGTGCCGGAACAGCAATGTCGCCGGGCACCGGGCAGACCTGGTGATCGAGCAGGCGGCGCGGGCCAACGCCGCTCTGCG CGGGTCGCGCGAGGTGTCGGTGGAGGATGTCACGAAGGTCGCGGGCTTTGCGCTCGTGCATCGCCGCCGCGATCCGGTTC CGCCGCCCGAACAGAAGCCGCAGGAGCCGGAGCGCCAGGAGGAGCAGTCGCGTGACGAGCAGTCCCGGCAGGAGAAGCCG GAAGAGCGTGGCGATGAGCCGCAGCAGCCACAGGAGGGCGACGACAGGCGGGACGGCAACGACGATTCCGGCAATGAAGA GAGGTCGCAGCCAGAAAACAGGGATGCCGCCGAACAGCAGGAGCGGCCCGATAACGAAGGTCAGGACGAGCTGTTCAGCA TCGGCCAGTCCTTTCGTGTTCGCAGCATCGCCACTCCGAAAGATCGCAAGATGCGGCGCGGCTCCGGAAAGCGTTCGCGG TCGCGGGTTTCGCAGAAGCAGGGGCGCTATACCAAGAGCACCATGCCGCGCGGCAACAACGACATAGCGCTCGACGCCAC GCTCAGGGCCGCCGCGCCGTTCCAGCGCCATCGTGAAAACCCCAACGGCATGGCGGTGGTGTTGCAGAACGAGGATATCC GCGAAAAGATCAGGGAGAAGCGCCTCGGCAACCTGCTGATTTTCGTGGTCGATGCGAGCGGTTCGATGGGCGCGCGGGGC CGCATGGCCGCCTCGAAAGGGGCGGTCATGTCGCTCTTGCTCGACGCTTACCAGAAGCGCGACAAGCTGGCGATGGTCTC GTTCCGCAAGAATGAGGCGTTCGTCAATCTGCCGGTCACCTCCTCCATCGAGCTTGCCGCCCGGATGCTCAAGGAGATGC CGGTGGGCGGGCGCACCCCCTTTTCCGCCGGTCTGCTCAAGGGGTACGAAATCGCTCAAAACTATCTCCGCAAAGAGCCG GGCGGACGACCGCTTATCATCCTTGTCACCGACGGCAAAGCGAATCGGGCCATCGGGCAGGGCAAGCCGCTCGACGAAGT GTTCACCATCTCCGAAAAGATTTCCCGCGAGGAGCGAATCCGCTTTCTCGTCGTCGATACCGAAGAGCCTGGTCTGGTCA CTTTTGGTCTCGCCAAAAAAATCGCCGGTCTGCTCGATGCCTGGTACTACCGCATCGACGACTTGCGTGCAGACACCCTT GTTTCCATCGTAAAAACCATGATGCCATGA
Upstream 100 bases:
>100_bases AACCTGCTCGACCGCGAGTATCTCTATGTCGATGGCTATGACGCGCCGCCCCGTGAGTGGAAGATTGGCATGAACTACAC TTTCTGTCTGAACTGAAATC
Downstream 100 bases:
>100_bases AAAAGAACTACACCTATCCCTTTACGGCCATTGTCGGTCAGGAAGAGATGAAGCTCGCGCTGATTCTCAACATCATCAAT CCGGCCATCTCCGGCGTGCT
Product: magnesium-chelatase subunit D/I family protein
Products: ADP; phosphate; Mg-protoporphyrin IX; H+
Alternate protein names: NA
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MKRKYFPFSAILGQEDLKKALLLNAVNPRIGGVLVRGEKGTAKSTAVRALGALLAAARNGSGGEGEVVVTLPLNATEEMV AGGIDFQQTMKEGRRVFQPGLLAKAHKGILYVDEVNLLDDHLVDIVLDAASSGENRVEREGITLSHPSLFVLAGTMNPEE GELRPQLLDRFGLCVEVRGEADPALRVDLMLRREAFDREPEEFSERYRAEEERLGRTIADAQSLLPSVRIPSHLRGFISE LCRNSNVAGHRADLVIEQAARANAALRGSREVSVEDVTKVAGFALVHRRRDPVPPPEQKPQEPERQEEQSRDEQSRQEKP EERGDEPQQPQEGDDRRDGNDDSGNEERSQPENRDAAEQQERPDNEGQDELFSIGQSFRVRSIATPKDRKMRRGSGKRSR SRVSQKQGRYTKSTMPRGNNDIALDATLRAAAPFQRHRENPNGMAVVLQNEDIREKIREKRLGNLLIFVVDASGSMGARG RMAASKGAVMSLLLDAYQKRDKLAMVSFRKNEAFVNLPVTSSIELAARMLKEMPVGGRTPFSAGLLKGYEIAQNYLRKEP GGRPLIILVTDGKANRAIGQGKPLDEVFTISEKISREERIRFLVVDTEEPGLVTFGLAKKIAGLLDAWYYRIDDLRADTL VSIVKTMMP
Sequences:
>Translated_649_residues MKRKYFPFSAILGQEDLKKALLLNAVNPRIGGVLVRGEKGTAKSTAVRALGALLAAARNGSGGEGEVVVTLPLNATEEMV AGGIDFQQTMKEGRRVFQPGLLAKAHKGILYVDEVNLLDDHLVDIVLDAASSGENRVEREGITLSHPSLFVLAGTMNPEE GELRPQLLDRFGLCVEVRGEADPALRVDLMLRREAFDREPEEFSERYRAEEERLGRTIADAQSLLPSVRIPSHLRGFISE LCRNSNVAGHRADLVIEQAARANAALRGSREVSVEDVTKVAGFALVHRRRDPVPPPEQKPQEPERQEEQSRDEQSRQEKP EERGDEPQQPQEGDDRRDGNDDSGNEERSQPENRDAAEQQERPDNEGQDELFSIGQSFRVRSIATPKDRKMRRGSGKRSR SRVSQKQGRYTKSTMPRGNNDIALDATLRAAAPFQRHRENPNGMAVVLQNEDIREKIREKRLGNLLIFVVDASGSMGARG RMAASKGAVMSLLLDAYQKRDKLAMVSFRKNEAFVNLPVTSSIELAARMLKEMPVGGRTPFSAGLLKGYEIAQNYLRKEP GGRPLIILVTDGKANRAIGQGKPLDEVFTISEKISREERIRFLVVDTEEPGLVTFGLAKKIAGLLDAWYYRIDDLRADTL VSIVKTMMP >Mature_649_residues MKRKYFPFSAILGQEDLKKALLLNAVNPRIGGVLVRGEKGTAKSTAVRALGALLAAARNGSGGEGEVVVTLPLNATEEMV AGGIDFQQTMKEGRRVFQPGLLAKAHKGILYVDEVNLLDDHLVDIVLDAASSGENRVEREGITLSHPSLFVLAGTMNPEE GELRPQLLDRFGLCVEVRGEADPALRVDLMLRREAFDREPEEFSERYRAEEERLGRTIADAQSLLPSVRIPSHLRGFISE LCRNSNVAGHRADLVIEQAARANAALRGSREVSVEDVTKVAGFALVHRRRDPVPPPEQKPQEPERQEEQSRDEQSRQEKP EERGDEPQQPQEGDDRRDGNDDSGNEERSQPENRDAAEQQERPDNEGQDELFSIGQSFRVRSIATPKDRKMRRGSGKRSR SRVSQKQGRYTKSTMPRGNNDIALDATLRAAAPFQRHRENPNGMAVVLQNEDIREKIREKRLGNLLIFVVDASGSMGARG RMAASKGAVMSLLLDAYQKRDKLAMVSFRKNEAFVNLPVTSSIELAARMLKEMPVGGRTPFSAGLLKGYEIAQNYLRKEP GGRPLIILVTDGKANRAIGQGKPLDEVFTISEKISREERIRFLVVDTEEPGLVTFGLAKKIAGLLDAWYYRIDDLRADTL VSIVKTMMP
Specific function: Unknown
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR012804 - InterPro: IPR002035 [H]
Pfam domain/function: PF07728 AAA_5; PF00092 VWA [H]
EC number: 6.6.1.1
Molecular weight: Translated: 72106; Mature: 72106
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS50234 VWFA ; PS00676 SIGMA54_INTERACT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKYFPFSAILGQEDLKKALLLNAVNPRIGGVLVRGEKGTAKSTAVRALGALLAAARNG CCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC SGGEGEVVVTLPLNATEEMVAGGIDFQQTMKEGRRVFQPGLLAKAHKGILYVDEVNLLDD CCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCHHHH HLVDIVLDAASSGENRVEREGITLSHPSLFVLAGTMNPEEGELRPQLLDRFGLCVEVRGE HHHHHHHHCCCCCCCHHHHCCEEEECCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECCC ADPALRVDLMLRREAFDREPEEFSERYRAEEERLGRTIADAQSLLPSVRIPSHLRGFISE CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LCRNSNVAGHRADLVIEQAARANAALRGSREVSVEDVTKVAGFALVHRRRDPVPPPEQKP HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC QEPERQEEQSRDEQSRQEKPEERGDEPQQPQEGDDRRDGNDDSGNEERSQPENRDAAEQQ CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHH ERPDNEGQDELFSIGQSFRVRSIATPKDRKMRRGSGKRSRSRVSQKQGRYTKSTMPRGNN HCCCCCCHHHHHHHCHHHEEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCC DIALDATLRAAAPFQRHRENPNGMAVVLQNEDIREKIREKRLGNLLIFVVDASGSMGARG CEEEEEHHHHHCCHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCCCC RMAASKGAVMSLLLDAYQKRDKLAMVSFRKNEAFVNLPVTSSIELAARMLKEMPVGGRTP CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCCCCC FSAGLLKGYEIAQNYLRKEPGGRPLIILVTDGKANRAIGQGKPLDEVFTISEKISREERI CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHCE RFLVVDTEEPGLVTFGLAKKIAGLLDAWYYRIDDLRADTLVSIVKTMMP EEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MKRKYFPFSAILGQEDLKKALLLNAVNPRIGGVLVRGEKGTAKSTAVRALGALLAAARNG CCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC SGGEGEVVVTLPLNATEEMVAGGIDFQQTMKEGRRVFQPGLLAKAHKGILYVDEVNLLDD CCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCHHHH HLVDIVLDAASSGENRVEREGITLSHPSLFVLAGTMNPEEGELRPQLLDRFGLCVEVRGE HHHHHHHHCCCCCCCHHHHCCEEEECCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECCC ADPALRVDLMLRREAFDREPEEFSERYRAEEERLGRTIADAQSLLPSVRIPSHLRGFISE CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LCRNSNVAGHRADLVIEQAARANAALRGSREVSVEDVTKVAGFALVHRRRDPVPPPEQKP HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC QEPERQEEQSRDEQSRQEKPEERGDEPQQPQEGDDRRDGNDDSGNEERSQPENRDAAEQQ CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHH ERPDNEGQDELFSIGQSFRVRSIATPKDRKMRRGSGKRSRSRVSQKQGRYTKSTMPRGNN HCCCCCCHHHHHHHCHHHEEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCC DIALDATLRAAAPFQRHRENPNGMAVVLQNEDIREKIREKRLGNLLIFVVDASGSMGARG CEEEEEHHHHHCCHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCCCC RMAASKGAVMSLLLDAYQKRDKLAMVSFRKNEAFVNLPVTSSIELAARMLKEMPVGGRTP CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCCCCC FSAGLLKGYEIAQNYLRKEPGGRPLIILVTDGKANRAIGQGKPLDEVFTISEKISREERI CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHCE RFLVVDTEEPGLVTFGLAKKIAGLLDAWYYRIDDLRADTLVSIVKTMMP EEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; protoporphyrin IX; Mg2+; H2O
Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]